Mita019717.1
Basic Information
- Insect
- Metalampra italica
- Gene Symbol
- Znf711
- Assembly
- GCA_949699065.1
- Location
- OX452998.1:4852465-4863247[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.00015 0.0087 16.8 1.9 1 23 291 313 291 313 0.98 2 10 0.15 8.6 7.3 0.2 1 23 346 369 346 369 0.97 3 10 0.016 0.92 10.4 5.1 1 23 376 398 376 399 0.96 4 10 5.9e-07 3.4e-05 24.4 0.2 2 23 405 426 405 426 0.98 5 10 2.4e-05 0.0014 19.3 4.0 1 23 432 454 432 454 0.98 6 10 0.00059 0.034 14.9 1.9 1 22 460 481 460 485 0.93 7 10 0.00026 0.015 16.0 0.5 1 23 493 518 493 518 0.97 8 10 1.8 1e+02 4.0 0.7 1 21 524 544 524 547 0.94 9 10 4.2e-06 0.00024 21.7 1.0 1 23 556 578 556 578 0.98 10 10 5.6e-05 0.0032 18.1 0.4 1 23 584 607 584 607 0.96
Sequence Information
- Coding Sequence
- ATGGATTTTATAATGTCAGTTAACGCAGACGAGTTCAAACCAGATCTTGAgccaacaaaaacaatatgcCGATGTTGTATTACCACAGAAAAACCTATGAAAAACATTGGACATTTCGCATCATATTTTAGAGATTTAACAGGAATAAATGTATCAGAATCTGATGGCCTGCCCCAATGGCTGTGCGTGGAATGCTCGCTGTTGCTGCAGAAGGCCGTGAGATTCAAATACAAGCTGCTGCGAGCCCACACCATGCTGTACCAGTACCTCACCAGGTGTGCGCCGTTTCCCATAGACGCGCAAGACCCAGAGCTGAGCAAGTACGCGACGCCGCACCTCCACGCCACGCCCACCCTCACCATAGACTCCAGCTGCAAAGCGAAGCTTGGATACCATAAAGTTTTGCAGCACAAGAAGCAAATCCAAACGACTGAATTAGACGTAATAGAAGTACCATTTGTGAGCAAGGAAGAGGATGGGACAGTCAAGGAAGAGATGGGGTTCTCCGACTACGAGGACAACATCACGCTTGAGGAGTACCGCTCTAACGTAACGAAGCTGACGGACGAAGTGCCAAAGATCACGGAGGACGACCTGGAGCAGCTGCTGCAGGTGTCCGAGAGCCTCCACCTGCAGCAGGACGCCGACGACGAACACCTCAAGAGGAAGAGGAAACCCAAGAGGAAAGAGAAAGAGGAAAAAGTTAGGAAAAAGAAGAATTGCATAGAGCAGACAGAGGCGGAGGAACCAAAGACATCGATACGCAAGCCCATAGAGCTGGACCCCACCAAGATTAGAATCGTCACTTTGAACCCAGAGGAACAGGTCAAACAAAGAGAGGAGGAGAGCAAACTCAACCTGAAGTTTCCGTTCCAATGCGAGTTGTGCTTCAAAGGGTTCAATTTCGAGAGCAAACTGGAGAACCACATGACCAAGCATAGTCCGTCCCGCGGCGCGTACAAGTGCTCGCTGTGCAGCGTGTACCTGCCCACGGCGTACTCGCACAGCGTGCACTCCGTGATCCACACGCGCCGCTTCGAGTGCGCGCGCTGCGGCCGACGCATGATCGACCGCGCCTCCATACTGGATCACTACAGGACTCAGCACGAAGGCTTACTCACTCTCTACACGTGTCAAATATGCGGAAAGATGTCcagCAACAGCAAGACCCACCGGGGGCACATGCGGAACCACCACTCGGGCGAGCGGCCCAAGTGCGACCAGTGCGGCAAGAGCTTCGTCAACAACGACTCCTTGGCGGAGCACATGCAGATCCACCAGGGCATCAAGAACTACTCGTGCGGCGAGTGCGGCAAGCGGTTCCGCACGCGCACGCAGATCAAGCACCACCAGCTCAAGCACAGCGACGTGAAGCAGTTCTACTGCGTCGAGTGCGACGTCAGATTCAAATCGGCGCACAGTTTGCGGCAGCATCTGCAGAAGAGTTTGAAGCACAAAGACAAGCAGAGTTTCAAATACGTGTGCACCCGCGAGCGGTGCGACAAGCGGTTCGAGAGCGAGCGCGCGCTGCAGCAGCACGTGCGCGTGCAGCACGAGGGCGAGCGCGCGCACCGCTGCGCGCAGTgcgccgccgcgctcgccaCGCGCAACTCGCTCGCCAAGCACGTGCGCTGCGTGCACGCCGGccaccgcccgccgccgcggcaCGTGTGCGACACGTGCGGCAAGGCGTTCCGGGGCAAGAGCGTGCTGACGAACCACGTGCGCACGCACACGGGCGAGAAGCCGTTCGAGTGCGCGGAGTGCGGCCGCAAGTTCACGCAGCGCACCGCCATGCGCACGCACGTCAAGCTCGTGCACCTCAAGATGCGCCGCTCCGCCAAGATCAAACCTGAAGTGCCTCTGGAAGCTCGAGACCCGCCGAAGATAGACCTGTTCACCAAGGAGGAGGCTCCCCTGGTCTTCGACTCTTGGAGCCGGCCGGGCATGCAGCAGTGCGAGGTATACTTCCACGTGACGGCGGGGCCTGGACTCAACGTCAGTTACACGGAAGGTGCTAACAAATAG
- Protein Sequence
- MDFIMSVNADEFKPDLEPTKTICRCCITTEKPMKNIGHFASYFRDLTGINVSESDGLPQWLCVECSLLLQKAVRFKYKLLRAHTMLYQYLTRCAPFPIDAQDPELSKYATPHLHATPTLTIDSSCKAKLGYHKVLQHKKQIQTTELDVIEVPFVSKEEDGTVKEEMGFSDYEDNITLEEYRSNVTKLTDEVPKITEDDLEQLLQVSESLHLQQDADDEHLKRKRKPKRKEKEEKVRKKKNCIEQTEAEEPKTSIRKPIELDPTKIRIVTLNPEEQVKQREEESKLNLKFPFQCELCFKGFNFESKLENHMTKHSPSRGAYKCSLCSVYLPTAYSHSVHSVIHTRRFECARCGRRMIDRASILDHYRTQHEGLLTLYTCQICGKMSSNSKTHRGHMRNHHSGERPKCDQCGKSFVNNDSLAEHMQIHQGIKNYSCGECGKRFRTRTQIKHHQLKHSDVKQFYCVECDVRFKSAHSLRQHLQKSLKHKDKQSFKYVCTRERCDKRFESERALQQHVRVQHEGERAHRCAQCAAALATRNSLAKHVRCVHAGHRPPPRHVCDTCGKAFRGKSVLTNHVRTHTGEKPFECAECGRKFTQRTAMRTHVKLVHLKMRRSAKIKPEVPLEARDPPKIDLFTKEEAPLVFDSWSRPGMQQCEVYFHVTAGPGLNVSYTEGANK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00674542;
- 90% Identity
- -
- 80% Identity
- -