Basic Information

Insect: Metalampra italica
Gene Symbol: -
Assembly: GCA_949699065.1
Location: OX452996.1:1551793-1580665[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.19 11 7.1 0.1 2 23 508 529 507 529 0.96

2 19 0.0014 0.082 13.7 0.1 1 23 539 562 539 562 0.98

3 19 0.084 4.8 8.2 0.3 1 20 721 740 721 742 0.93

4 19 0.016 0.94 10.4 3.7 2 23 784 805 783 805 0.95

5 19 8.3e-05 0.0048 17.6 0.3 2 23 847 870 846 870 0.97

6 19 0.062 3.6 8.6 0.3 1 23 876 898 876 898 0.92

7 19 0.003 0.17 12.7 3.3 1 23 904 926 904 926 0.98

8 19 0.48 27 5.8 0.0 2 20 937 955 936 957 0.92

9 19 1.4 81 4.3 0.2 1 23 1036 1058 1036 1058 0.95

10 19 3.5 2e+02 3.0 7.0 1 23 1065 1087 1065 1087 0.95

11 19 0.0019 0.11 13.3 1.8 1 23 1130 1153 1130 1153 0.95

12 19 0.077 4.4 8.3 2.6 1 23 1160 1183 1160 1183 0.97

13 19 0.023 1.3 9.9 0.3 2 23 1205 1227 1204 1227 0.96

14 19 0.38 22 6.1 0.3 1 23 1244 1266 1244 1266 0.96

15 19 0.00085 0.048 14.4 0.8 3 23 1273 1294 1272 1294 0.95

16 19 0.00021 0.012 16.3 0.6 1 23 1300 1322 1300 1322 0.98

17 19 0.00041 0.023 15.4 1.0 1 23 1328 1350 1328 1350 0.96

18 19 0.00012 0.0071 17.0 0.1 1 23 1356 1378 1356 1378 0.98

19 19 1.6e-05 0.00091 19.9 0.8 1 23 1384 1407 1384 1407 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.19	11	7.1	0.1	2	23	508	529	507	529	0.96
2	19	0.0014	0.082	13.7	0.1	1	23	539	562	539	562	0.98
3	19	0.084	4.8	8.2	0.3	1	20	721	740	721	742	0.93
4	19	0.016	0.94	10.4	3.7	2	23	784	805	783	805	0.95
5	19	8.3e-05	0.0048	17.6	0.3	2	23	847	870	846	870	0.97
6	19	0.062	3.6	8.6	0.3	1	23	876	898	876	898	0.92
7	19	0.003	0.17	12.7	3.3	1	23	904	926	904	926	0.98
8	19	0.48	27	5.8	0.0	2	20	937	955	936	957	0.92
9	19	1.4	81	4.3	0.2	1	23	1036	1058	1036	1058	0.95
10	19	3.5	2e+02	3.0	7.0	1	23	1065	1087	1065	1087	0.95
11	19	0.0019	0.11	13.3	1.8	1	23	1130	1153	1130	1153	0.95
12	19	0.077	4.4	8.3	2.6	1	23	1160	1183	1160	1183	0.97
13	19	0.023	1.3	9.9	0.3	2	23	1205	1227	1204	1227	0.96
14	19	0.38	22	6.1	0.3	1	23	1244	1266	1244	1266	0.96
15	19	0.00085	0.048	14.4	0.8	3	23	1273	1294	1272	1294	0.95
16	19	0.00021	0.012	16.3	0.6	1	23	1300	1322	1300	1322	0.98
17	19	0.00041	0.023	15.4	1.0	1	23	1328	1350	1328	1350	0.96
18	19	0.00012	0.0071	17.0	0.1	1	23	1356	1378	1356	1378	0.98
19	19	1.6e-05	0.00091	19.9	0.8	1	23	1384	1407	1384	1407	0.97

Sequence Information

Coding Sequence: ATGGCAGAGGAGCCCCCGCTGGTGCTGTGCATGGAGAGCGCGTGCGGCGAGGACGTGGCGCTCCGTATCGAGCCCTCCGACGACTTCCAGTGCTTCCTCGACAAGGCCAAATCGCTCCTAGGCTTCGATGTCGACATAAACTCTATAACAAAGAACCAACCGGTATCCCTAACCGACAATTGCTACCAATTCCTAATAAACGCCGAACAGAGCCTGACCGACGCCGATCTCACCAACAAGAGCCTCGACCAGATACTGCCTCCCTACAAGGGAAACGACGATCTCGTTTACATATTAGACGACGGTACACAAATACAAGCTTCCCAGATCAATTTCGATAACGACGACCCTTTAGTTGACTTGACAGTTGAGAAAATACCATTCGTAAAGTATATAGAAGGTGAAACTGATGACGTTGATGCAGAAAACGTTGAAGTGCGTGATACCAAACTATATAGCATAGCTAAGAGCCCAGTATCGAAATGGTCTGGTAATAACTCCAGTCCGAAATGCAACTTCGTAAGCAGTCTGCCTTTTAAACCAGTCAGTAATCGTACGTCTGGATTCGAAACTCAGTTCATTCAGTATTTAGAAGCCAGTGCTTCCAAAAGCTACGCTACATTGAACAATGTGACCAATAGAAGTAAATCCCCATTGAGTTTGATTCGCGATAATTACATACAGTATGACGACAATTTTCAAGCGCGCAGTAATGCAGACGATTTTTCTCATTATACTAGAGAAGAAGTACTGAATATGTTCAAAGATTCGCCGGTAGCGGCGCTTCCTTATGAGAATCATGGGTTTACAGAGAAGAGAAAGCATGCACGCAAATCTGACCCTTCGAGACTGTATAAAGCCTGGAATTCTAAGTCAGTTGCAACCGGTGATTTAACCGGTGTTCTGATAGCCGAATCGCAAAATCAGAACTGTTTTATCTGTGGCAAATATGTTGATAACAGTCTGGAAAAGCTGTATCTGTTTGACAACGAGGACCAAAGACTCCACAGATCATCGCCTCAGAGGAAAATGTCGACGCAACTCAAGATTATATGCGAGCAGTGTTTGGAGGTCAATTTTAAACCGTGCCGAATGAAAAGTCCTAATCAGTCTTTGAACCCCGACGAATATTTGGTCATCCGAAACAACCAGCAGTATATCTTCCAAAAGACAAACTCTCTGAACTTCAAAAACATTTCGCAAGGGACTGTTTCTAATGATGCGAACGCCACCGCAGCCAGGGTGGAGTCTGATTCGAAAAATAGAGACAAAACTGAGTTCGTTAAAGTAGAAATCGGTTCAGATGGGGAGATCGTAACGAAACCCATAGACAACGACGTCGGATACGATGACGTCATTATAGTGAAGGACGAAACGAAAGGCGGCAGCTCCAGCGATGTGGAAATCATAGAGAACGGCCCGGAAATAGATGATAATATCATAGACAATTTGGAGGACGCGGATGAGGATGTGATTGAGTTTTTGGGGAAGTACCAATGTGACCAGGATGTCAGTGAAATGAAATGCAGATTTTGCGAGCGTATGTTTGCGGATGTATCGGAAGTGATAGAACACGGCGAGACGCACAGGCACGCCATGGAGGAGGGGCAGGTGTATCCTTGTCCACTCTGCGATTACGGTTATGCGAACTTCAAGTGGTTGAAAGGCCACTTGAAAACTGCTCACGACAAAACAGTCATCAAAGCCGAGGCTGGCGATACCAAAAATACGGATGAGATCCAAAAAGttGTGGAGGTCAAATCATCTAAGGAGTCGTCTCCCATAGCCAAAAGAACGCGCAGCGCTGCGAGGAAGGTGATCGATACACAGCCAGAGACTCCACCGAAGCAAGAAGACTCGAATACTGTAATAACAAATCCAGAAGCGGTTAATAATGACTTCGTGATCAAGACGGAAGTGAAGCAGGAATGCGTGGGCAGCAGTGAGGACGAGATATGGATCGTGCGGACCGCCGACGAGGAGGCGGGGAAGCAGCTGCAGCAGATCCTGGACGCGGCCAAGGTACGATCCGGCACAAAGGACCAGGTGGGTCCAGCTCGGAAGTGGCACCTGCTCGGAAGTGGGACCTGCTCGGAAGTATGGGACCTGCTCGGAAGTGGGGCCAGCTCGGAAaCAGAAAATGAAGATAGATGTAAGAAACACAAGTGTGATAATTGCGGGCAGCTGTTCGGGTCGCGCGCGGGGCTGGCCGCGCACGCGTGCCGGCGCCGCGGCCGGAAGCGGAAGCCGCAAGCCGACACGGCCATGCGCGTGCCCACCAGGGAAGACTTCATCAAGATACCGCGTAAGAAGAAGAACAGGAGCCCGACGAGCGACCCCCACATCGTGACGTGCCACTACTGCAACGAGTCTTTCACCTCCAAAGTGAGACTCAAGTTCCACATGCAGTTCCACGAGCCGACGAGCCTGGTGACTGCGGGCGGCGAGTACGCGTGCTCGGAGTGCGCGCGCGGCGTGTTCGCCACGGAGACGGAGCTGTTCGACCACGTGCACTTCCAGCACAAGCACAAGCGCTGGCAGTGCCCCGTCGACGGCTGCGGCAAGACGTTCTACCTCAGGGCAACACTGACGAAGCACAGCCGCACGCACACGGACACGCGGCGCTACGCGTGCAGCACGTGCGGGAAGCGGTTCCTCGACAAGCAGACCTTGGACGAGCACGGAGTCACACATTTACAGAAAAAGCCGTTCCAGTGCCACATATGCCTGAAGCAGCTGACGCGGCGGTCGCGGCTGCGCATGCACCTGCGCGCGCACGAGGAGGAGCTGTGTCCACGGCTGGTGCTGGTGTGCGCCGTGTGCGCCCGAGCCTTCAGGGACGCGGCTGACGTGCAGGAGCACCTAACGAGGTCCCCGGAGTGCATCGCCGCGTTCGCCGACGAGCTGAAGGAGGAGACGGAAGCGGTCACCGTCCAGCTGTCGCCCACCAGCGGCGTCGTGCGGCACACGGTGCAGGTCACCGAGTCGCCGAAGCTGTCGAAGCCTATCCGGCGGCAGGTGGGCGGGCCGCTGGCGGAGGGCCTGCTGGCGAGCGTGCCCGACGCGGCGCGCGCCATCACGCGCGTCGTCCAGATAGAGAAGGCCTTCCGCTGCGAGTTCTGCGAGGACGTGTTTTACTCCGAGGACGGGATCAACAACCACCGCGTGATCCACAAGGGCATCAAGAACCCGTTCACGTGCCACATCTGCAAAGTGAGCTTTGCATCCTATTCCAGATGCACAACACACAAAACCACCCACGGCTTCTACAAGCGCTCCCTGGCCGAGGCGAAGAAGCAGGCCAGCAGGTCGCCCGGCAGCAGGCACGAGGCCGGCCCCTCGTCCACCGGCATACTCGGCTACGGGGACTTTCCTGTAGTCAAGCACTTTCTTTGCGAAGACTGCGGCCGCTCGTACCTGCACTGGACGTACCTGCAGGTGCACAGACGCATGAAGCACGCCGTCGACAGCTACCAGCACAAGTGTGACCAGTGTCAACTCACCCTACCCAACAGCTGGAGTCTGACCTACCACAAAAAGAAGATGCACAGCAATACGCCGAAAGACGAGATCTTAACCACCTCGAAGTCTGGCAAAGACGACTACAGGATCCCGTGCCGGGACTGCGACCAGCTGTTGCCCAATAAGAGTGCGCTTTACAAGCACAGGAAGAAAGAGCACAGTGACATGTCCCTGAACATGAACAACAAGCCGGGAACGCCGGGCGTGTTCAGGTGCGGCGCGTGCGACAAGCAGTGCGGCAGCCGCGGCGGGCTGGACGCGCACTCGCGCGGCCACGCGGCGCGCTCCGCCGCCTGCGCCAAGTGCGGACACAGCTTCCCCAGCGCGGCCGATCTGCACAAGCATCTCAAAGAAGTGCACGGGCACGAGTTGGACTACCCGTGCTCCGTGTGCACGAAGCTGTTCTGCTCACGCGCCGAGCTGGCGGTGCACGCGCGCACgcacggcgcggcgcgcgcgcacgcgtgCCCCGTCTGCGGGCACGGGTTCCGGACCGCCTCCATGCGGAACGAGCACCTCAGGATACACACGGGCGAGCGGCCCTACCCGTGCGACCTGTGCGGGATCGCTTTTAGACGGTCGACGGCGATGCGCAACCACCGGCTGATCCACACGGGCGAGCGCGCGTTCCCGTGCGCGCGCTGCCCCAAGCGCTTCCGCGTGCGCTCCGACCTGCGCGCGCACCTGCGCCGCAAGCACCCCGCCAGGCTCGTGCTCATCGAGGTGGCCGGCCTGAACCCCTCTCCCGAGGAAGTGATGGGCCACCTCACTGCCAACAACATACCGCACGACAAGGTCATCGAGATCACCAAGATGTCGTTTCCGAAGGGCACGTCGAGTGTAGTGCCGAGCTCGTCGCGCGCCCTCTCGCTGCTGTGCGCCGTGCCGCGCACGCAGCTCGCCTACAGCCACGCGCGCCCCGAGCAGAGCTGCATCTACGACCTCGTgccgccggcgcgccgcggccgcggcatcGCCAAGAACCCACGAAAGTGCAAGGTGTTGCCGAGCGCCGACCAGACTGCACCGTCGGACCCCAACGCGTTCCCCGTTCACTTTCCTGCGACCGGCGAGGAGCTGCCTGACCTGAACATGCAACTACTGCTGCGCGACGACAGCCAGGTGGTCGACCACGCCGCCAGGCCGCCCCAGTAG
Protein Sequence: MAEEPPLVLCMESACGEDVALRIEPSDDFQCFLDKAKSLLGFDVDINSITKNQPVSLTDNCYQFLINAEQSLTDADLTNKSLDQILPPYKGNDDLVYILDDGTQIQASQINFDNDDPLVDLTVEKIPFVKYIEGETDDVDAENVEVRDTKLYSIAKSPVSKWSGNNSSPKCNFVSSLPFKPVSNRTSGFETQFIQYLEASASKSYATLNNVTNRSKSPLSLIRDNYIQYDDNFQARSNADDFSHYTREEVLNMFKDSPVAALPYENHGFTEKRKHARKSDPSRLYKAWNSKSVATGDLTGVLIAESQNQNCFICGKYVDNSLEKLYLFDNEDQRLHRSSPQRKMSTQLKIICEQCLEVNFKPCRMKSPNQSLNPDEYLVIRNNQQYIFQKTNSLNFKNISQGTVSNDANATAARVESDSKNRDKTEFVKVEIGSDGEIVTKPIDNDVGYDDVIIVKDETKGGSSSDVEIIENGPEIDDNIIDNLEDADEDVIEFLGKYQCDQDVSEMKCRFCERMFADVSEVIEHGETHRHAMEEGQVYPCPLCDYGYANFKWLKGHLKTAHDKTVIKAEAGDTKNTDEIQKVVEVKSSKESSPIAKRTRSAARKVIDTQPETPPKQEDSNTVITNPEAVNNDFVIKTEVKQECVGSSEDEIWIVRTADEEAGKQLQQILDAAKVRSGTKDQVGPARKWHLLGSGTCSEVWDLLGSGASSETENEDRCKKHKCDNCGQLFGSRAGLAAHACRRRGRKRKPQADTAMRVPTREDFIKIPRKKKNRSPTSDPHIVTCHYCNESFTSKVRLKFHMQFHEPTSLVTAGGEYACSECARGVFATETELFDHVHFQHKHKRWQCPVDGCGKTFYLRATLTKHSRTHTDTRRYACSTCGKRFLDKQTLDEHGVTHLQKKPFQCHICLKQLTRRSRLRMHLRAHEEELCPRLVLVCAVCARAFRDAADVQEHLTRSPECIAAFADELKEETEAVTVQLSPTSGVVRHTVQVTESPKLSKPIRRQVGGPLAEGLLASVPDAARAITRVVQIEKAFRCEFCEDVFYSEDGINNHRVIHKGIKNPFTCHICKVSFASYSRCTTHKTTHGFYKRSLAEAKKQASRSPGSRHEAGPSSTGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHAVDSYQHKCDQCQLTLPNSWSLTYHKKKMHSNTPKDEILTTSKSGKDDYRIPCRDCDQLLPNKSALYKHRKKEHSDMSLNMNNKPGTPGVFRCGACDKQCGSRGGLDAHSRGHAARSAACAKCGHSFPSAADLHKHLKEVHGHELDYPCSVCTKLFCSRAELAVHARTHGAARAHACPVCGHGFRTASMRNEHLRIHTGERPYPCDLCGIAFRRSTAMRNHRLIHTGERAFPCARCPKRFRVRSDLRAHLRRKHPARLVLIEVAGLNPSPEEVMGHLTANNIPHDKVIEITKMSFPKGTSSVVPSSSRALSLLCAVPRTQLAYSHARPEQSCIYDLVPPARRGRGIAKNPRKCKVLPSADQTAPSDPNAFPVHFPATGEELPDLNMQLLLRDDSQVVDHAARPPQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -