Basic Information

Insect: Metalampra italica
Gene Symbol: -
Assembly: GCA_949699065.1
Location: OX452973.1:4036192-4045107[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0065 0.37 11.7 1.5 3 23 230 251 229 251 0.96

2 23 0.31 18 6.3 0.3 1 22 627 648 627 648 0.95

3 23 6.2 3.5e+02 2.3 0.3 1 22 690 711 690 713 0.82

4 23 0.097 5.6 8.0 0.9 3 21 724 742 722 743 0.94

5 23 0.57 32 5.5 0.1 3 23 752 773 750 773 0.88

6 23 0.039 2.2 9.2 0.2 3 23 793 814 791 814 0.94

7 23 0.0037 0.21 12.4 2.2 1 23 820 843 820 843 0.95

8 23 0.13 7.3 7.6 0.0 1 22 869 890 869 892 0.90

9 23 0.005 0.29 12.0 3.5 1 23 897 919 897 919 0.97

10 23 0.017 0.96 10.3 0.3 1 23 925 948 925 948 0.95

11 23 0.00096 0.055 14.3 1.3 1 23 961 983 961 983 0.98

12 23 0.00016 0.0094 16.7 1.8 1 23 1031 1054 1031 1054 0.97

13 23 0.00032 0.018 15.7 3.0 1 23 1114 1137 1114 1137 0.96

14 23 0.001 0.058 14.2 2.1 2 23 1163 1185 1162 1185 0.95

15 23 0.08 4.6 8.2 0.1 2 23 1191 1213 1190 1213 0.93

16 23 0.0091 0.52 11.2 0.2 1 21 1257 1277 1257 1278 0.95

17 23 0.0011 0.065 14.0 0.6 1 23 1288 1310 1288 1310 0.93

18 23 0.0001 0.0059 17.3 0.3 2 23 1401 1423 1401 1423 0.93

19 23 1.7e-07 9.9e-06 26.0 1.4 3 23 1430 1450 1429 1450 0.98

20 23 0.01 0.6 11.0 0.2 1 23 1469 1491 1469 1492 0.95

21 23 0.17 9.7 7.2 0.0 1 23 1513 1535 1513 1535 0.97

22 23 0.019 1.1 10.2 0.5 1 23 1541 1564 1541 1564 0.95

23 23 0.00023 0.013 16.2 0.4 1 23 1573 1596 1573 1596 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0065	0.37	11.7	1.5	3	23	230	251	229	251	0.96
2	23	0.31	18	6.3	0.3	1	22	627	648	627	648	0.95
3	23	6.2	3.5e+02	2.3	0.3	1	22	690	711	690	713	0.82
4	23	0.097	5.6	8.0	0.9	3	21	724	742	722	743	0.94
5	23	0.57	32	5.5	0.1	3	23	752	773	750	773	0.88
6	23	0.039	2.2	9.2	0.2	3	23	793	814	791	814	0.94
7	23	0.0037	0.21	12.4	2.2	1	23	820	843	820	843	0.95
8	23	0.13	7.3	7.6	0.0	1	22	869	890	869	892	0.90
9	23	0.005	0.29	12.0	3.5	1	23	897	919	897	919	0.97
10	23	0.017	0.96	10.3	0.3	1	23	925	948	925	948	0.95
11	23	0.00096	0.055	14.3	1.3	1	23	961	983	961	983	0.98
12	23	0.00016	0.0094	16.7	1.8	1	23	1031	1054	1031	1054	0.97
13	23	0.00032	0.018	15.7	3.0	1	23	1114	1137	1114	1137	0.96
14	23	0.001	0.058	14.2	2.1	2	23	1163	1185	1162	1185	0.95
15	23	0.08	4.6	8.2	0.1	2	23	1191	1213	1190	1213	0.93
16	23	0.0091	0.52	11.2	0.2	1	21	1257	1277	1257	1278	0.95
17	23	0.0011	0.065	14.0	0.6	1	23	1288	1310	1288	1310	0.93
18	23	0.0001	0.0059	17.3	0.3	2	23	1401	1423	1401	1423	0.93
19	23	1.7e-07	9.9e-06	26.0	1.4	3	23	1430	1450	1429	1450	0.98
20	23	0.01	0.6	11.0	0.2	1	23	1469	1491	1469	1492	0.95
21	23	0.17	9.7	7.2	0.0	1	23	1513	1535	1513	1535	0.97
22	23	0.019	1.1	10.2	0.5	1	23	1541	1564	1541	1564	0.95
23	23	0.00023	0.013	16.2	0.4	1	23	1573	1596	1573	1596	0.96

Sequence Information

Coding Sequence: ATGAGTGTGAATTACGACCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATATTTCCTACCACCAGTCCGGATGACACGGGACCTCCCGTCCTCGCCTCGAAAATAAAGGATTGCGTGTCCGTACAAaTAAACGAAAATGATGACCTGCCCACTAATGTCTGCAGGAAATGCATGAACAATGTCAACAACTGGCACATATTTAAGACAGTATGTGAAAGGACACAAAACAAACTACAGTTTCTTATTAAAAAGGATGGCAGCCTACTGGAAGAGGTGAAAGTGAAAAGTGAACCTTTCTCAGATGAGGCTTATGATGGAGTGTTCATTGATGGCTCATACCCAGATTCTGAGAATGCCGCCGGTTCCTCATCTAAAGTACAGCCAGAAGGCCCACCAATCCTGGCTTCCTTGGGGCTCACACCGAGGAGTGATAAGAAATATGTGGACCCTCGTATGGATTGGCACCGCGTTCATGCAATATTGGACATGGTTCAAGATGATGAGGGCTTGGAGAGCGACAAAGAAGAAGATGAGGAGGAAGAGGGAATGATTGATTCCACACAGTCGTTTGCGAAGGTGCCCCACATTCCTGAGGTATCCATCACTGTGATGCGTCCTACTGGAGAGACATTGCAGTCTCGACAAGGGATCCAACAGTTGGCGTCCAAAGACTGCCTCGTCTGCGGTCGATCTTACAGATACTCGCATAACGCCAGGCGACATGAACTCACCTCTCACGGCTTTGATAGATACACCAACAAGGTAACGGTAAAAAAGTCGCACTCACGCATGCAACCCAAGCTCAGACCAAATCCGTTCAATCCTAAAGCGCGTCTTATGCCTAACCCAATTAGCCACAAAATGCGACTATTACCTAAGTCTATGCCAACCAAAATGATTCCACACAAGGTTATAGCTCCTCCaaaacctatacctattaaGCAATCGAAAGTATCGCAAAATAACTTGCCCTACCCTCTTCGTATTAAAGCTCTGAAGGATTTGCAAataaggaaaaaggaacctcAAATTTTGAAGACTTTGCTAACAACAAAACCTGAAGTGTTGGTGTCTGAACCTGAGATTTTAAATTCCGCACCGGAAAGCCCTGAAACTTTGATATCCGAACCGGAAATTGCATCGTTTCAAGTAGAAGCAATTTTGACTGAACCTGATACCTATGACCAACAACCGTCGGATGAAGTTGATGGCGAGGTACATAATAATCAAAGTCATAATTATGATACTGTTGACATGGATTCCGATAACGAAATTGAAATTGCTAGACAAAAAGGAAATGATGCTGAAGCTAATGAACATGAAACGGAGGAAAATATGCaacatgatgatgaaaatatagATGATAATGAAAATGATGAGAAAGAGTCGAAAGtagatgaaaatgaaaatccaGAAATTGATAATGTTGAACCTACAGTTGATAACGAAGTGAAGGAAGAGGAAGATGCCAGTGAGGGTCGAGATAATGATGATCAAGAGGTTAACCACGAAGGAAACGAAGATGACGACGATGAAGAGCTCCCACCAATTGGTTTAGCTCCAGTTGTGGAGATAAATGAGGACATGCAGACCAATTCGTATAATAGCGAAGTGAATGAAGAAGAGGAAGAAGATCAAGACGAAACAATCGATGCCAATGATACCATAGAGGGTGAAGATAACGTCAAGGAACTTGATCCTGACAAACTATATGTGACAAAGACACAGAGggattttataacaaaatatcgCGATATAATTCAGCAGATCAACACTAAAAGATGTCTTTGCTGTGATCGAGAACATCCTCGCAGGAAAGCAGTCATTCagcatttacaaaaaaatggaCACAAGGTTCCAAAGCATACATGCTATAACTGCGTGGTCACATTTGGACATATTGGCGCGTTACTCAGCCACATGAGATCCAATACCTGCACAAATTTATGGAAAATCATTTACAACGAAAATGGTATAACCGATGATTTAGTCCTTGAAGATGAGCCCAAAGATGTTAAAGTACAGTATAAAGACATTTTAAATGCTAGGTCTTATGCCTGTAAACTATGCCCAGCTAAATTCCAACTTAAACAGTTTATAATGAAGCATGTATTGGATGTCCACGAGGATGGCCAATCTATGGTACCACTAGCCTGTGTCCACTGCAGAGCCAGGTTCAAGGAGAAGAATTCATGGAAAAAACACATTCGTAATGGGGACTGTACAGTCAACATAGCTTGCGACTTGTGTAcagagaaatttaaaaatttactgtCTTTTAATGATCATGCCATAGCTGTACACGCCGGGGACTTCGATCAAGATAATCAGAGCAAACGCGTCGACGGGAGACCTACCGACTGTCCTTTATGCGGAAAAAGGAACAATAACTATGTTAATTTGGTAAAGCATTTAAAAGCTGTACACAGTGAAGAAAAGCCACATTATTGCCAACATTGCGACGCTAAATTCGAACAAACTCCCGAGCTTAATAAGCACATTTATATGGCTCATTCTGATAAATCTTTGGGCGTTCAAAGCACTGAACCGGATATGTCGCTTGTCAAAGAGGAAGCTGAAGAATACCATTATTCTTGTACAGAATGTAATGCCATATTCGAAACCGTCGACGCTTGGACTGATCATCAGGTGGATGAACATAATCAAGTTGCTCATCATTGTGATCAATGtgacaagaaatttttgaGGCCTTCGGAGCTTGCTGAACATAAGAACACGCACTTGCGAGTCAAGTTCTATCCTTGCAGCGTGTGTACTAACTCTTACAGCACTCCTCAGAAACTATCGGAACATGTGCAACAGTCTCACCCGGGAGCTGGAGCGTACTCGTCGGCTGAAGCAGAATTTTATTGCGACATATGCATCAGATCATTCAAAAGTCGCCAGGCCTATTCCAATCACATGCGCATACACGCTAAAGTGCCCACTACTAACAGGAAACCAGGGGAATCGAAAGGTTTCGCTCCGCAGATCATTGGAAAACCTATTCGACAATTCAACATGGCTCAGCAGGGTTTCGTCTTTAAACCAAACTGCAACGTTCCTAATGCTCCCTACTCATGTGACATTTGTGGAAAAGGGTTTATGcataagaaaaatatatggaaACATAAAAAGGTATTACATGCTGATCTGTTAAACGACAGAAATGACAGTGAGGAGAACACCATGCAGGCATCAACTGAGGAAGACGAATACAATATCGATGAGAATGGTACCATACTGTCGACGCCACAGTTCAACAGTTTTAACTTCACTAACATTGCTAATAATACACAGCAGACCCAGTCGCAAACCGAAGTGTACACGTGTGATATCTGCTACCAACGATTCTCGTTTAGAGATAGTTTGAGAAAGCACAAACGTGCTAAACATGGTGTCGGAAATGCTGGCGCAGGCAGCAGCTCTGAAAGTCAGACGCAAGTGCCTATTTCTGATGGTACCAGGTCGAGTTGTACTATCTGCAAGATCACCTTCTCCGACAAGAAGTCGTACTATCGCCACAGGAAGAACGTCCACAAGTCGTCAGCGCAAATGTGTAAAATATGCGGCAAACCTCTCAACTCTACATTGGAGCTATATGAGCATTTGAAAGCAGCCCATGCTCGAGAACTGCTTGGCTATAATGCTAATCAAGGTTCCAGCAAATCACAAGAGATAGCCCCTGAAATGGAAATGGAGTATGAGGGTGATCAAGATTGTGCAGACCCCAGCGTGGACTATCAAGCGCGCTATCCTTGTGACACGTGCGGCAAACAATTTGTTGGTCTACTTGCATTGCAGAACCATCAATGTATATCGCAAATCACATCGTCGCCGCAAACGTTTGATTGTGAGATATGTCATAAGAGTTATACGTCCATAGCTGCACTTAAGAGTCACCGCGGCTGGCATTTACGCTCGCCCGACGGTAAAGCAGCTGCCAATAATTCCGGCCTCTGGATGCCTCAGCACAAAGTGACGAGTAAGGTTAGCAAACATGAGGTCCTCGACCCCTCTCAGCTCGCTCGGGTCCAGCACTCAGCTCCTGCCGCCGCAGTTACTGCTAAGAGGAGACTTCCACCTGAAGTGGAAGTTACTGTGGTCAACCCAAACAAGAAATTGCGCTCCGATGACTCGGTCGAGATGGACCAGCAGAATATGGGTGGTGTACTTGAAGATAGGTACTGCACGATATGTGACAAGGAGTTCACTAAGCGAGCGGCATACCAACGCCACATGGATGAGGTCCACCAGCCGAACTCGGTATTTTGTCCCATATGCGATAAAAGTTTCACACGCAAATCGACTTTGCTCGTTCATATGAAAAAGCACTACGAAGGTGGCGAAGGTAGCTCCTCTGTAACCGGCCAAATGGAAGATGATGCGTACCCGTGCGACCTGTGCGGCGCTCAGTACGACAACGAACAGGCGCTAAGGGCGCATCGGGTGCGGCACCACGGGGAGGAGTCGGAGCACGAGTCCGAGGACGAGGCTCACAACGTCGCTCCCCCGGGGGAGTTCACGTGCGCGCAATGCGGCGACGGCGTGGCCACCCCTCGCGACCTCATCGCCCACCGCACCATGCACGCCACCCCCACTAAATACTTTTGTAACATTTGCAAAGTTTATTTCGCTAGAGCTTTGGACCTTTCCTCTCACACTCGGGCGCGCCACTCTGACACTGATAAACATGCCTCGTTCCCCTGCGCCATGTGTGACCGTTTCTACATGAACAAGAAAAGCTTGCAACGGCACATCGAGATGGCTCACTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELLPIFPTTSPDDTGPPVLASKIKDCVSVQINENDDLPTNVCRKCMNNVNNWHIFKTVCERTQNKLQFLIKKDGSLLEEVKVKSEPFSDEAYDGVFIDGSYPDSENAAGSSSKVQPEGPPILASLGLTPRSDKKYVDPRMDWHRVHAILDMVQDDEGLESDKEEDEEEEGMIDSTQSFAKVPHIPEVSITVMRPTGETLQSRQGIQQLASKDCLVCGRSYRYSHNARRHELTSHGFDRYTNKVTVKKSHSRMQPKLRPNPFNPKARLMPNPISHKMRLLPKSMPTKMIPHKVIAPPKPIPIKQSKVSQNNLPYPLRIKALKDLQIRKKEPQILKTLLTTKPEVLVSEPEILNSAPESPETLISEPEIASFQVEAILTEPDTYDQQPSDEVDGEVHNNQSHNYDTVDMDSDNEIEIARQKGNDAEANEHETEENMQHDDENIDDNENDEKESKVDENENPEIDNVEPTVDNEVKEEEDASEGRDNDDQEVNHEGNEDDDDEELPPIGLAPVVEINEDMQTNSYNSEVNEEEEEDQDETIDANDTIEGEDNVKELDPDKLYVTKTQRDFITKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNTCTNLWKIIYNENGITDDLVLEDEPKDVKVQYKDILNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSMVPLACVHCRARFKEKNSWKKHIRNGDCTVNIACDLCTEKFKNLLSFNDHAIAVHAGDFDQDNQSKRVDGRPTDCPLCGKRNNNYVNLVKHLKAVHSEEKPHYCQHCDAKFEQTPELNKHIYMAHSDKSLGVQSTEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVDEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCTNSYSTPQKLSEHVQQSHPGAGAYSSAEAEFYCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGESKGFAPQIIGKPIRQFNMAQQGFVFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLLNDRNDSEENTMQASTEEDEYNIDENGTILSTPQFNSFNFTNIANNTQQTQSQTEVYTCDICYQRFSFRDSLRKHKRAKHGVGNAGAGSSSESQTQVPISDGTRSSCTICKITFSDKKSYYRHRKNVHKSSAQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKSQEIAPEMEMEYEGDQDCADPSVDYQARYPCDTCGKQFVGLLALQNHQCISQITSSPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVLDPSQLARVQHSAPAAAVTAKRRLPPEVEVTVVNPNKKLRSDDSVEMDQQNMGGVLEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPICDKSFTRKSTLLVHMKKHYEGGEGSSSVTGQMEDDAYPCDLCGAQYDNEQALRAHRVRHHGEESEHESEDEAHNVAPPGEFTCAQCGDGVATPRDLIAHRTMHATPTKYFCNICKVYFARALDLSSHTRARHSDTDKHASFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -