Mita019125.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Metalampra italica
Gene Symbol
-
Assembly
GCA_949699065.1
Location
OX452997.1:3335803-3355113[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 47 0.1 5.9 7.9 1.7 3 23 32 52 30 52 0.95
2 47 0.015 0.88 10.5 0.1 1 23 56 78 56 78 0.95
3 47 0.37 21 6.1 0.3 1 15 83 97 83 106 0.78
4 47 0.098 5.6 7.9 0.2 1 23 112 135 112 135 0.94
5 47 0.001 0.057 14.2 0.4 1 23 217 240 217 240 0.97
6 47 0.07 4 8.4 5.3 1 23 311 333 311 333 0.97
7 47 0.00015 0.0086 16.8 0.8 1 23 337 359 337 359 0.98
8 47 0.17 9.8 7.2 0.2 1 23 440 462 440 462 0.97
9 47 0.086 4.9 8.1 0.4 2 23 487 509 486 509 0.94
10 47 0.022 1.2 10.0 0.1 2 23 534 555 533 555 0.97
11 47 0.00025 0.015 16.1 5.1 1 23 559 581 559 581 0.98
12 47 0.0058 0.33 11.8 0.7 1 23 586 609 586 609 0.89
13 47 1.2 69 4.5 2.0 1 23 615 638 615 638 0.95
14 47 0.0039 0.22 12.3 0.4 1 23 741 763 741 763 0.94
15 47 0.11 6.4 7.8 0.0 2 23 787 809 786 809 0.96
16 47 0.0075 0.43 11.5 1.7 2 23 832 853 831 853 0.96
17 47 0.001 0.058 14.2 0.4 3 23 859 879 858 879 0.97
18 47 0.0016 0.094 13.5 2.6 1 23 887 909 887 909 0.99
19 47 0.45 26 5.8 4.0 1 23 915 938 915 938 0.96
20 47 0.13 7.2 7.6 4.3 1 23 944 967 944 967 0.96
21 47 0.0025 0.14 13.0 0.2 1 20 973 992 973 994 0.95
22 47 0.00086 0.049 14.4 0.8 1 23 1006 1028 1006 1028 0.97
23 47 0.028 1.6 9.6 0.0 2 23 1052 1074 1051 1074 0.96
24 47 0.00089 0.051 14.4 0.8 1 23 1110 1132 1110 1132 0.97
25 47 0.023 1.3 9.9 0.0 2 23 1156 1178 1155 1178 0.96
26 47 0.13 7.6 7.5 1.7 3 23 1202 1222 1200 1222 0.92
27 47 0.002 0.11 13.3 0.6 3 23 1228 1248 1227 1248 0.97
28 47 0.0054 0.31 11.9 3.5 1 23 1259 1281 1259 1282 0.96
29 47 1.2 72 4.5 1.3 2 23 1288 1310 1287 1310 0.92
30 47 0.066 3.8 8.5 1.4 3 23 1318 1339 1316 1339 0.96
31 47 0.005 0.29 12.0 0.3 1 20 1345 1364 1345 1366 0.95
32 47 0.0015 0.087 13.6 0.4 1 23 1378 1400 1378 1400 0.97
33 47 0.034 1.9 9.4 0.0 2 23 1424 1446 1423 1446 0.96
34 47 0.0075 0.43 11.5 1.7 2 23 1469 1490 1468 1490 0.96
35 47 0.003 0.17 12.7 0.5 3 23 1496 1516 1495 1516 0.97
36 47 0.027 1.5 9.7 4.7 1 23 1524 1546 1524 1547 0.96
37 47 0.82 47 5.0 0.7 2 23 1553 1575 1552 1575 0.92
38 47 1 60 4.7 2.5 1 23 1581 1604 1581 1604 0.97
39 47 0.14 7.8 7.5 0.0 1 20 1610 1629 1610 1631 0.94
40 47 0.0015 0.087 13.6 0.4 1 23 1643 1665 1643 1665 0.97
41 47 0.034 1.9 9.4 0.0 2 23 1689 1711 1688 1711 0.96
42 47 0.0075 0.43 11.5 1.7 2 23 1734 1755 1733 1755 0.96
43 47 0.0016 0.093 13.5 0.8 3 23 1761 1781 1760 1781 0.97
44 47 0.022 1.3 10.0 2.5 1 23 1792 1814 1792 1815 0.95
45 47 1.2 72 4.5 1.3 2 23 1821 1843 1820 1843 0.92
46 47 0.075 4.3 8.3 2.1 1 23 1849 1872 1849 1872 0.95
47 47 0.0054 0.31 11.9 0.1 1 20 1878 1897 1878 1899 0.96

Sequence Information

Coding Sequence
ATGCGCAATCATGTCGTCCAACACGGCCACACTTTCGATTCGAACCATCCAGACGGTGTGATACCGTTTTGTCTGGACAAAGAATCTTGGTGTTGCTTGATATGCCAAGAGAAGTTCAATAATTTCCTGAAGCTGTACGAGCACATGAACGTGCATTATCAGCATTACATATGCGCGATTTGTGGCAAAGGATACATGACCGCTCCAAGGTTGAGGAAGCATTCGGAAGTCCACGTGTCGGGTTCATTTCCGTGCACAGTCTGCGGTAGGATATTTAGCATGCGCGCTGCCAGGGACTACCACAAAGCTCACGCTCATGCCAAAGCTCCCCGCTACGAATGCCCACAGTGCAACATGCGATTCGGCGGGTACTATGACCGCATGAACCATTTGAACGAAGCCCACCGGGAAAAAGAGGTTGCATACAATTgttCCGCTATAGCGGACGCGGAGGGAAATGTAGGAGTTAGGCGCGTTAGGAAGTTAAAGGAGAACGTTAGCGCCAGACAGATGCGCCGGCGTCGCCGCGCTAACAACCAACTGCCCGAAGAGTCCGAGAAACGCATCTCGAAAACTATGATGCGAAGAAACGCTATGACCATTCTAGAATGTTCCACAGCGTGGGCGTTCAGATGGTTCCACAGCGCCTTTTACTGTTCCTACTGTGATACAAAATTCGTCGATGTCGCCCCTTTGCGTCAACATGTCAGATCTAACCACTTGATTGAAACCCCAACCAAAGGGATATTTGCTAAGTTAACTGAAAATAATATGGTCAAAATAGACATAGCTGAACTTACATGTAGACTTTGCAATTTGCTGGTAGACGGGATAGATAATTTGAAATCGCATCTAGTAACGGTTCATGGTAAAGTTTTGTACCAGGACTACAGCGACGGAGTCCTTCCTTTTAAATTGGATCAGACCGGATTCTTTTGTCAAAAGTGCTTTGCACATTTCTCGAGTTTCTCCAAAATGAACGAGCACATGAATACTCACTACCAGAACTACATTTGTGACTCGTGCGGGAAGGCATTCGTGTCCAAATCTCGGTTTCGTACTCACGTACAGTCTCACGAGACAGGCACTTTTCCTTGCGGCGAGTGTGACGAGATTCTGGACACTCGAGCGGCTCGCATGTGCCACAGGCTGCGAATACATAGGAAAGaaCCGGAGGTCACAGAGAGCGAAGATACCACAGGGAAATCTGTTCGAATAAAGTGGAAGCGGCTTCGCAGACTTGTTGAAGATAAAGCTAACGCGGCGTTTATATTAGAGCACTCGAATGCAGTGGCGTTTAGATGGTTCCGTGGTAAATTCATGTGCGCTTACTGCCCTACGGTCTGCCCTAACGTCACTGAGGTCCGCAACCATACAATAATACATGACAATCGCAACGTTTTCAAAAACCCAAATATTCGCAACTCGTTTCCACTCAGAGTCGATATAACAGATCTATCTTGTAGTCTCTGCAATGAAAGAGTTGAGACTCTGAAGAATTTGAAGGGCCATCTAATGAACAATCATTCAAAGTGCATAGATCCAGATGAGAACTACGGCGATGGAGTAGTACCTTACGTTTTAACTGGAACCGAACTAAAGTGTGTACTTTGCGGGGAACTGTTTGAAAGTTTCATGTCACTCATATTGCATATGAACAGTCATTATCAAGATTATGTTTGTCACACATGCGGGAAAGGCTTCTCTGGGAAGCACAAGCTTCGTACACACCGCATGAATCATGAGTCTGGTCAATTTTCGTGTCCaaaatgcgggttggtgttTACTAATCGCATGGCGAGGAGTAGGCATACATATGAGAGTCATGGACCAAAAGAACGACACCGTTGTCCAATCTGCGAAGATCGCTTTGATTCGTACCACGCGAGATTGAGACACCTGGAGAGAGTGCATGGACTGAAAGTCATGGACGGCGAAGATACCGCAGAGAAATCGATTAAGATAAAATGGAAGCGACAGCAATTGGAAAATACTGCTGAAAAATCTATTCAAATAAAGTGGAGGCGACGACTTGTTGAAGATAAAGCTAACGCGGCGTTTATATTAGAGCACTCGAATGCAGTGGCGTTTAGATGGTTCCGTGggcCCGTCTTTGTCAAAAAATGGGTTCCAAGGCGCAAGTACGGCGATCAACGGGACAATgcggttattatttttcagtgcTCCAACGTGTGCCCTTTTAGATGGAAACACGGGGCGTACACGTGTGCGTATTGCCCTAAGAAATTTGGTGACTTCCCACAACTCAAAGAGCACACGGTGGAACACCCCAACAGAGTCGAAGTAATGCGTTACGCCCGGCCTCTCTACGCTATTAAAGTAGACATCACTGATCTCAGATGCACTATCTGCCCTGAACCTCTCGAAGACATAGACGCTCTGGCGAACCATTTGATCACTGTACATCAGAAGCCGATCGTCAAAGACCATGAAATGGGCGTTACGCCTTTTCTACTGAGCTCAAATAAGCTGGTTTGTGTACACTGCCAAAAGCAATTCGAGCTTTTCACTAACTTAAACAGTCATATGAACGAACACAATCCTAACAACATATGCTTCCAGTGCGGCAAATCTTTTACAGCAGTATCGCGACTGAAGGCTCACCTGAAAATCCACGAAGCTGCCAAAAATGGACAGTACAAGTGCTCCAAATGCTACAAGACTTTCGCCTCAAAAATCTTAAGACAACAGCACTTATTGACACATCAGAAAGaattgaaatataaatgtCCTTTTTGCAATGAATACTTCAAAGCTTACCACGAGAGAATGAAACATCTAGAGAAATACCATGGCAAGAAAGTGGAATACGCTTGCCATATATGTCCGGCGAAGTTTGCTTTGTTTCATCACAGGACCAGGCATATCAGGCAAGTCCATATCCAGAAAAAGCCGTTTACTTGTGAACTGTGTGCGTATCAGTTCGTTACAGCAGTACAGTTGAAACGGCATATGtactcCAACGTGTGCCCGTTTAGATGGAAACACGGGGCGTACACGTGCGCGTACTGCCCTAAGAAGTTTGGTGACTTCACACAACTCAAAGAGCACACCTTGGAACACCCCAACAGACTCGAAGTAATACGTTACGCCCGGCCTCTCGACGCCATTAAAGTAGACATCACTGATCTCAGATGCACTATCTGCCCTGAACCTCTCAAAGACATAGACGCTCTGGCGAACCATTTGATCACTGTACACCAGAAGCTGATCGTCAAGGACCATGAAATCGGCGTTATGCCTTTTCTATTGAGCTCAAATAAGCTGtactcCAACGTGTGCCCTTTTAGATGGAAACACGGGGCTTACACGTGCGCGTACTGCCCTAAGAAGTTTGGTGACTTCACACAACTCAAAGATCACACGCTGGAACACCCCAACAGAATCGAAGTAATACGTAACGCCCGGCGTCTCGTCGCCATTAAAGTAGACATCACTGATCTCAGATGCACTATCTGTCCCGAATCTCTCGTAGACATAGATGCTCTGGCGAACCATTTGATCACTGTACATCAGAAGCCGATCGTCAAAGACCATGAACTGGGCGTTATGCCTTTTCTATTGAGCTCAAATAAGCTGGTTTGTATACACTGCCAAAAGCAATTCGAGCTTTTCACTAACTTAAACAGTCATATGAACGAACACAATTCTATCAACATATGCTTCCAGTGCGGTAAATCTTTTACAGCAGTATCGCGACTGAATACTCACCTGAAAATCCACGAAGCTGCCAACAATGCCAACAATGGACAGTACAAGTGCTCCAATTGCTACAAGACTTTCGCCTCAAAAATCTTAAGAGAACAGCACTTATTGACACATCATAAAGAAAAGAGAAATAAATGTCCTCTTTGCAATGAATACTTCAAAGCTTACCACGAGAGAATGAAACATCTAGAAGAATACCATGGCAAGAAAGTGGAAATCGCTTGCCATATATGTCCGGCGAAGTTTGCTTTGTGCTCTCTCAGGAACAGGCATATCAGGCAAGTCCATATCCAGAAAAAGCAGTTTACCTGTGAACTGTGTGCGTATCAGTTCGTTACAGCAGCACATTTGAAAGAGCATATGtactcCAACGTGTGCCCTTTTAGATGGAAACAAGGGGCTTACACGTGCGCGTACTGCCCTAAGAAGTTTGGTGATTTCCCACAACTCAAAGAGCACACGCTGGAACACCCCAACAGAATGGAAGTAATACGTAACTCCCGGCGTCTCGACGCCATTAAAGTAGACATCACTGATCTCAGATGCACTATCTGCCCTGAATCTCTCGAAGATATAGACGCTCTGGCGAACCATTTGATCACTGTACATCAGAAGCCGATCGTCAAAGACCATGAACTGGGCGTTATGCCTTTTCTATTGAGCTCAAATAAGCTGGTTTGTGTACACTGCCAAAAGCAATTCGAGCTTTTCACTAACTTAAACAGTCATATGAACGAACACAATCCTAACAACATATGCTTCCAGTGCGGCAAATCTTTTACAGCAGTATCGCGACTGATGACTCACCTGAAAATCCACGAAGCTGCCAAGAATGGACAGTACAAGTGCTTCAATTGCTACAAGACTTTCGCCTCAAAAATCTTAAAACAACAGCACCTATTGACACATCATAAAGAAAAGAGAAATAAATGTCCTTTTTGCAATGAATACTTCAAAGCTTACTACGAGAGAATGAAACATCTAGAGGAATACCATGGCAAGAAAGTGGAATACGCTTGCCATTTATGTCCGGCGAAGTTTGCTTTATGCTCTCGCAGGACCCTGCATATCAGGCGTGTCCATATCCAGAAAAAGCCGTTTGCCTGTGAACTTTGTGCGTATCAGTTCGTTACAGCAGTACAGTTGAAAGGGCATATGtactcCAACGTGTGCCCTTTTAGATGGAAACTCGGGGCTTACACGTGCGCGTACTGCCCTAAGAAGTTTGGTGACTTCCCACAACTCAAAGAGCACACGCTGGAACACCCCAACAGAATCGAAGTAATACGTAACGCCCAGCGTCTCGTCGCCATTAAAGTAGACATCACTGACCTCAGATGCACTATCTGTCCTGAATCTCTCGAAGACATAGATGCTCTGGCGAACCATTTGATCACTGTACATCAGAAGGCGATCGTCAAAGACCATGAACTGGGCGTTATGCCTTTTCTATTGAGCTCAAATAAGCTGGTTTGTGTGCACTGCCAAAAGCAATTCGAGCTTTTCACTAACTTAAACAGTCATATGAACGAACACAATCCTAAAAACATATGCTTCCAGTGCGGCAAATCTTTTACAGCAGTATCGCGACTGAAGACTCACCTGAAAATCCACGAAGCTGCCAACAATGCCAACAATGGACAGTACAAGTGCTCCAATTGCTACAAGACTTTCGCCTCAAAAATCTTAAAAGAACAGCACTTATTGGCACATCATAAAGAGAAGAGAAATAAATGTCCTCTTTGCAATGAATACTTCAAAGCTTACCACGAGAGAATGAAACATCTAGAGGAATACCATGGCAAGAAAGTAGAATTCGCTTGCCATATATGTCCGGCGAAGTTTGCTTTGTGCTCTCTCAGGAACAGGCATATCAAGCAAGTCCATATCCAGAAAAAGCAGTTTACCTGTGAACTGTGTGCGTATCAGTTCGTTACAGCAGCACATTTGAAAGAGCATATGGTGAGTCTTCAGTCGCGATACTGCTGTAAAAGATTTGCCGCACTGGAAGCATACGTTGTTAGGATTGTGTTCGTTCATGTGACTGTTTAA
Protein Sequence
MRNHVVQHGHTFDSNHPDGVIPFCLDKESWCCLICQEKFNNFLKLYEHMNVHYQHYICAICGKGYMTAPRLRKHSEVHVSGSFPCTVCGRIFSMRAARDYHKAHAHAKAPRYECPQCNMRFGGYYDRMNHLNEAHREKEVAYNCSAIADAEGNVGVRRVRKLKENVSARQMRRRRRANNQLPEESEKRISKTMMRRNAMTILECSTAWAFRWFHSAFYCSYCDTKFVDVAPLRQHVRSNHLIETPTKGIFAKLTENNMVKIDIAELTCRLCNLLVDGIDNLKSHLVTVHGKVLYQDYSDGVLPFKLDQTGFFCQKCFAHFSSFSKMNEHMNTHYQNYICDSCGKAFVSKSRFRTHVQSHETGTFPCGECDEILDTRAARMCHRLRIHRKEPEVTESEDTTGKSVRIKWKRLRRLVEDKANAAFILEHSNAVAFRWFRGKFMCAYCPTVCPNVTEVRNHTIIHDNRNVFKNPNIRNSFPLRVDITDLSCSLCNERVETLKNLKGHLMNNHSKCIDPDENYGDGVVPYVLTGTELKCVLCGELFESFMSLILHMNSHYQDYVCHTCGKGFSGKHKLRTHRMNHESGQFSCPKCGLVFTNRMARSRHTYESHGPKERHRCPICEDRFDSYHARLRHLERVHGLKVMDGEDTAEKSIKIKWKRQQLENTAEKSIQIKWRRRLVEDKANAAFILEHSNAVAFRWFRGPVFVKKWVPRRKYGDQRDNAVIIFQCSNVCPFRWKHGAYTCAYCPKKFGDFPQLKEHTVEHPNRVEVMRYARPLYAIKVDITDLRCTICPEPLEDIDALANHLITVHQKPIVKDHEMGVTPFLLSSNKLVCVHCQKQFELFTNLNSHMNEHNPNNICFQCGKSFTAVSRLKAHLKIHEAAKNGQYKCSKCYKTFASKILRQQHLLTHQKELKYKCPFCNEYFKAYHERMKHLEKYHGKKVEYACHICPAKFALFHHRTRHIRQVHIQKKPFTCELCAYQFVTAVQLKRHMYSNVCPFRWKHGAYTCAYCPKKFGDFTQLKEHTLEHPNRLEVIRYARPLDAIKVDITDLRCTICPEPLKDIDALANHLITVHQKLIVKDHEIGVMPFLLSSNKLYSNVCPFRWKHGAYTCAYCPKKFGDFTQLKDHTLEHPNRIEVIRNARRLVAIKVDITDLRCTICPESLVDIDALANHLITVHQKPIVKDHELGVMPFLLSSNKLVCIHCQKQFELFTNLNSHMNEHNSINICFQCGKSFTAVSRLNTHLKIHEAANNANNGQYKCSNCYKTFASKILREQHLLTHHKEKRNKCPLCNEYFKAYHERMKHLEEYHGKKVEIACHICPAKFALCSLRNRHIRQVHIQKKQFTCELCAYQFVTAAHLKEHMYSNVCPFRWKQGAYTCAYCPKKFGDFPQLKEHTLEHPNRMEVIRNSRRLDAIKVDITDLRCTICPESLEDIDALANHLITVHQKPIVKDHELGVMPFLLSSNKLVCVHCQKQFELFTNLNSHMNEHNPNNICFQCGKSFTAVSRLMTHLKIHEAAKNGQYKCFNCYKTFASKILKQQHLLTHHKEKRNKCPFCNEYFKAYYERMKHLEEYHGKKVEYACHLCPAKFALCSRRTLHIRRVHIQKKPFACELCAYQFVTAVQLKGHMYSNVCPFRWKLGAYTCAYCPKKFGDFPQLKEHTLEHPNRIEVIRNAQRLVAIKVDITDLRCTICPESLEDIDALANHLITVHQKAIVKDHELGVMPFLLSSNKLVCVHCQKQFELFTNLNSHMNEHNPKNICFQCGKSFTAVSRLKTHLKIHEAANNANNGQYKCSNCYKTFASKILKEQHLLAHHKEKRNKCPLCNEYFKAYHERMKHLEEYHGKKVEFACHICPAKFALCSLRNRHIKQVHIQKKQFTCELCAYQFVTAAHLKEHMVSLQSRYCCKRFAALEAYVVRIVFVHVTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-