Mita019100.1
Basic Information
- Insect
- Metalampra italica
- Gene Symbol
- -
- Assembly
- GCA_949699065.1
- Location
- OX452997.1:3190832-3192990[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.082 2e+02 2.4 0.8 12 28 13 29 7 41 0.77 2 9 0.93 2.3e+03 -1.0 5.8 5 39 93 124 76 129 0.73 3 9 0.00088 2.2 8.7 0.9 13 40 129 153 118 162 0.83 4 9 5.2e-06 0.013 15.8 1.6 14 43 158 184 147 185 0.85 5 9 0.24 5.9e+02 0.9 0.6 18 29 205 216 196 238 0.79 6 9 0.37 9.2e+02 0.3 0.1 18 27 263 272 261 274 0.86 7 9 0.0063 16 6.0 1.0 3 24 277 298 275 301 0.87 8 9 0.00043 1.1 9.7 3.0 10 40 313 339 304 342 0.85 9 9 1.3e-05 0.031 14.6 0.8 2 44 333 371 332 371 0.90
Sequence Information
- Coding Sequence
- ATGTCGTGCATTGCTGGCTTCTACCGTACTTCTAACACCACGGAGGACCAGTACTGTTGCAATGCGTGCGGCAAAGGATTCTCGTCTCAGCCTCTGGTCGCGCAGCATTACAGATGCGTCCACCTTAAGAAACGACCTGATGAGAGCAAGTGTCCTCTATGCGATGTCCGACTCCCTGGGTATAAGAAAGCGTACCACATGGAAGAGGCGCACGGGATACCACCGCCGACTTGCGGAGTGTGCCAGAAGAAGTACAGATACCCGTATCAGGTTGTGCAGCATCAGAAAAGAGCTCATATGGGAGAGAAAACGGTCGTCTGCAGTGTTTGCGACAAAGGTTTCTTCGATAGTAAACGGTTGAAGGTGCACATGGCGACGCACTCGAGTGAGAAGCAGTTCACGTGTCAATATTGCGCGAAAGAATTCAAATGGGAGACCAATTTGCAGGCtcatattaaaatacatacaggaGACAGGAAATATCCGTGCGGGCTGTGCGGGAAGGCGTACATCCGGAAGTCTAACCTGCTACAACACATGGCCAGTAACCATGATGATGAGGACGGGGACAAGCAACTTGCCGACTATTACGCTGTCCAAGGCGGCCAATACTGTTGCAATGCGTGCGAGAGAAGTTTCTCGTCGCAGCCTCTCGTCTCCCAGCACTACCGATTCGTCCATCTAAAGAGACGCCCTCGTGAGAGAAAGTGTCCTAAATGCGATGCGAGACTCCCCGGATACATGAGGGCGTACCACATGGAAGAAGCGCACGGCATACCAGCTCCGACTTGCGGAGTATGCCAGAAGAAGTTCAGATACCCGTGCCATGTTCTGCAGCACCAGAAAAAAGTTCATATGGGGGAGAAAACGGCTGTCTGCCGAGTTTGTGATAAAGGTTTCTTTGAcgtcatcaggttgaagttgCATATGGCCACGCATTCGAATGAGAAGAAATTTAAGTGCCATTACTGCGCGAGAGAGTTCAAATGGGATAACAACCTGAAGGCTCACTTGAAAATACATACAGGCGACAAGAGATATGTCTGCGGCGTGTGCGGGAAGGCGTTCGTTCAGAAATCTACACTGAAACAACACGCTGCTAGAAATCATCCTGGAGTTGACGTTTCGTAA
- Protein Sequence
- MSCIAGFYRTSNTTEDQYCCNACGKGFSSQPLVAQHYRCVHLKKRPDESKCPLCDVRLPGYKKAYHMEEAHGIPPPTCGVCQKKYRYPYQVVQHQKRAHMGEKTVVCSVCDKGFFDSKRLKVHMATHSSEKQFTCQYCAKEFKWETNLQAHIKIHTGDRKYPCGLCGKAYIRKSNLLQHMASNHDDEDGDKQLADYYAVQGGQYCCNACERSFSSQPLVSQHYRFVHLKRRPRERKCPKCDARLPGYMRAYHMEEAHGIPAPTCGVCQKKFRYPCHVLQHQKKVHMGEKTAVCRVCDKGFFDVIRLKLHMATHSNEKKFKCHYCAREFKWDNNLKAHLKIHTGDKRYVCGVCGKAFVQKSTLKQHAARNHPGVDVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00994583;
- 90% Identity
- iTF_00994583;
- 80% Identity
- iTF_00994583;