Mita000480.1
Basic Information
- Insect
- Metalampra italica
- Gene Symbol
- SNAPC4
- Assembly
- GCA_949699065.1
- Location
- OX452969.1:8789026-8791479[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.62 5.4e+02 1.1 0.1 22 43 262 284 255 287 0.89 2 5 4.1e-10 3.5e-07 30.5 0.2 1 45 293 339 293 340 0.95 3 5 5.6e-08 4.8e-05 23.7 0.2 2 45 347 394 346 395 0.95 4 5 1.5e-11 1.3e-08 35.1 0.0 1 44 399 442 399 444 0.96 5 5 6e-05 0.052 14.0 0.0 4 45 455 498 454 499 0.94
Sequence Information
- Coding Sequence
- ATGGACAGTGATTCTGAAGATGAAATTGCTGATTTATGTCAACTCACAACTGTTAAAGAACCCGAAGAGCCCCAACCTTCGACAAGTGGGAGCCGCTCACAATATTCAGTCAGCGAAAGTGAAGCCGACATTGCTGCTTTATGTCAGCTTACATCTGTTAAAGAAGCCGAAGAGCCCCAACCCTCGACAAGTGGGAGCCGCTCACAATATTCAATCAGAGGTCTCTGCAACACCTCTTCAAATGTTCAACAGGAGTGCTTAAAAATTCAAGCTGCCATAAGTCTTAATAAATTGGTCGATGAAAAGCTAAAAAATCTTCAAGACCTACTAACTTTGAAACTGCGCGAGTGTCGGCAACAACTGAATAACTTCCATAGCTCTCCAGATACGCCCACTAAAAGTACTGACAAGAGCTTCAAGTATTTCCACTGTGGCAAACCATACTTCAAAGACCCTGCCAATTTTGCGGCTCCAGACAATGAGGATACTGTGCTAATGGCTAAGTCGCACATGTATGATTACACTAGCATTACATCCGTCCCAGGTTGGACTCTAAAAGAGAAGAGTGAATTAATCACCATACTCCACAAAAtgtctgttgatttgaaaaagAATGAATTAAACTCAAACATATCACAGTTACAACAAGAatccaataatacaaaaaaaactgctaAAACTGATAACAATAGAGAAAAGCATATAGCAGCAATTAGAAAAGAAATTTGTGATCTCCATAAAAAGCCTTTAGGTGATTTGGCCTTGCCAATTCATATGGAATATGATTGGGATATGGTGGCGAATAAAAGCAAATGCAGGCACAGCCCTCAGGAGTGCAGGGCTCTTTGGAGGTTATTTTTACATccattaataaacaaaaatagttGGAATAACACTGAGcatgaaaatttgaaaaaaattgctcATGCTAATGAGTTCCAAGATTGGGACAAGATTGCTGAAGAACTTGGTACTGGGAGGACTGGTTAccaatgttttgtttatttccgGACCAATATGAGGAATACTTTCACAGGACAAAAATGGTCTAACGAGGAGGAAGAATATCTCAAAACAATAATTGAGTACTATAGAGAAGGTGACTACATACCTTGGGGTAAAATATCATCTTTCATGGAAAACAGaactaaaattcaaatttacaaTAAGTACCTTCGACTCATGGAGCAAAGAAAGGGCAGGTTTCTGCCTGAAGAAGACGCAGTGATTCTCACTTGTGTCAAGAAATTTGGTCCAAACTTTAGAAGGGTGATGAAATATCTACCTGGCCGTTCTATGGCTCAGTTGCGTGCAAGATATAATGTGCTATTTACTGGAAATGGAAGAAAGACTTCGATTGTATGGACCGCAGATGAAGATAAGAAACTGATTCAATTTATGGCAAATCAGGATAGCATATTGAACTACTCCAGTTTAACTAAACATTTCCCAGGAAAAGACAGGGGTAATCTAAGAGCCCGGTACACAACTTTGGTTAAATGGATGAGAAAACATCCCAATGTAGATATTTCCAAGGCACCACGTAGAGGCGCACGTCGCCTTGTCCACGGTGTAGCTTCACAAGACCTAAATAACGCTGTTGAGAAGCTAACGAATAGAATGCAATTAAAAGTTGAAAACAAGAAATCTACAAAACTCAGCAAATATTCTACCCACGAAGAAGTAGACGCTGCTATTGTGGCTGCTCTAATTAATGAAAAGAATAAAGCCGAGGAAGAAGAGAAATCAAAAACATCTGACATGGAACAATCAGTTTTAAAAGAATATTGGGGGGTAACCTCAACTCCTCCAAATATAACTAACTTGCAAAAAgcacttattttattaaaagcaaAATTGGATAAAACGAAGTTCCTGAATAGCCCTGTTAGTCAGGTATTTCCAGAATTACTACAGGACAGCCAAGAAACGTGTGTTCAAGTAAAAAAGACTTATTCTAGAAATACAAGAATGGAGGTTTTGAATCAGGATCAACCGGACATATGGGGAAATAAAACCCTGGAGTCAACAGAGTATGTGCTCCCTCCAAACTATTCTACAATCACTGCTTGCAGGAAACTATTAGATTACTCCAATACTTCATCTGAAGACAAACAACCCATAGAGTTGAGTTCACTGGCAAAGAGAAACGTTGTCTTGAAGGATCAACTCGATCTTTTCATGGATCGCTGTAAGGTTTTATTCATGTGGCCAATGTTGCTTTCCAATGAAAGTCCTCCTACAAGACCAGTTCAGGAAGGTATGAAAATGGAACCACCGCCAGTGAAGACGTCAGTACTGCTTGGGGACCCTGGAATAGCCATTCCTGTCACACCTTGCACACCTTTTATCaatgaaaatattgatttatcTGAGTCCACTAAGAAAGAGGAAGACGTAACTGTAAAAGATATTTATGTTGGTAATGATGATCCCTTGTATAAGGAGCATTAA
- Protein Sequence
- MDSDSEDEIADLCQLTTVKEPEEPQPSTSGSRSQYSVSESEADIAALCQLTSVKEAEEPQPSTSGSRSQYSIRGLCNTSSNVQQECLKIQAAISLNKLVDEKLKNLQDLLTLKLRECRQQLNNFHSSPDTPTKSTDKSFKYFHCGKPYFKDPANFAAPDNEDTVLMAKSHMYDYTSITSVPGWTLKEKSELITILHKMSVDLKKNELNSNISQLQQESNNTKKTAKTDNNREKHIAAIRKEICDLHKKPLGDLALPIHMEYDWDMVANKSKCRHSPQECRALWRLFLHPLINKNSWNNTEHENLKKIAHANEFQDWDKIAEELGTGRTGYQCFVYFRTNMRNTFTGQKWSNEEEEYLKTIIEYYREGDYIPWGKISSFMENRTKIQIYNKYLRLMEQRKGRFLPEEDAVILTCVKKFGPNFRRVMKYLPGRSMAQLRARYNVLFTGNGRKTSIVWTADEDKKLIQFMANQDSILNYSSLTKHFPGKDRGNLRARYTTLVKWMRKHPNVDISKAPRRGARRLVHGVASQDLNNAVEKLTNRMQLKVENKKSTKLSKYSTHEEVDAAIVAALINEKNKAEEEEKSKTSDMEQSVLKEYWGVTSTPPNITNLQKALILLKAKLDKTKFLNSPVSQVFPELLQDSQETCVQVKKTYSRNTRMEVLNQDQPDIWGNKTLESTEYVLPPNYSTITACRKLLDYSNTSSEDKQPIELSSLAKRNVVLKDQLDLFMDRCKVLFMWPMLLSNESPPTRPVQEGMKMEPPPVKTSVLLGDPGIAIPVTPCTPFINENIDLSESTKKEEDVTVKDIYVGNDDPLYKEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -