Mita000585.1
Basic Information
- Insect
- Metalampra italica
- Gene Symbol
- jarid2b
- Assembly
- GCA_949699065.1
- Location
- OX452969.1:10924040-10937034[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-20 6.9e-17 61.9 0.1 6 89 582 662 578 662 0.93 2 2 0.15 3e+02 2.2 0.1 1 28 668 698 668 702 0.77
Sequence Information
- Coding Sequence
- atgtTTCTATCTAGTTTGTTTTTTACAGAAGAAGAAATCAATGAAGCAGAGTTGAATTCAGAAGAAGAAGTCAATGAAGCAGAGTTCAATTCCCCGCAAAACAATGGAAGAGAGGATATTCACTTTTGGAACGATTCCGGTGTGGTACCAGATATTACAGAGTCAAGATGCCCTATAGAGAACCACATGACCCTGAGGGATGTTTACAATGCGCCAGCATACATTAAAGACAGATTCTGCCACAGCTGCAGCAACTGTAAAAGGCTACTGAAAATCGACAAGTTGTCAAAGCTCATGCTGATACCTCAAAGGCCTGCTAGCGATGTATACGAATTTGACGCCGAGAGAGAGGCCAGCGACTGTGGACCATCGGCTTACCGTAAGCGgggcgggaatcgaaccacCGAAGCAAGCGGGTCCAGTAAAGAGCACTGCAAATATTTCGATTTGCTGCCCCCGGAGAACCCTCATTATATTCTACAATTGCGGTTGGTTGAGataCCAAACAAGGAAAATGAAAACCAGAAAATTATACGAGCCAATTTAGTGCCGAAATCCAACGATATTCAAACGGAGGACATCTGTTTGGTGCAGCACGAGGATCTGGTTGATGGCCTTATTCGGTTCATGACAGAAACAGAACAGACAGAAACTGCCACTAAACCTCAAAAATCTCTTAGCCACCCTAAAATACCAGGCACAAATGACGTACAAAATGAAGTCGCAGCTTCAAACGGAAACCCTACAAGGCCACCTAATCGTCAAAAATCTAAACCATGTGGCCATAAAAACTCTCCATCTTGCGCCTCAAACAGCAAGAAAacgagaataaataaaaagactgCAGAAAAAGACATTAGAAAAAGGGCAGTTAACAACAGGAAGATTAAGAGAATTAGTAAGCTTAACAAAAGTACCCTGGGCAAACCCCCGACCACTCCGAATGCTCAGAATGGCGGCCAGGAGTCTTCACAAATACAGAAGATAAAGGTTGCTTTGCCTAAGAGCTTGGGGCCCGGTGAGGTTGTAGAAGCGCCTACGTTCCACCTCAGCGAAGCAGATTTTAgaataCCAAACAAGGAAAATGAAAACCAGAAAATTGTGCAGCATGAGGATCTGGTTGATGGCCTTATTCGGTTCATGACAGAAACTACCACTAAACCCCAAAAATCTCTTAGCCACGCTAAAATACCAGGCACAAATGACGTACAAAATGAGGTCGCAGCTTCAAACGGAAACCCTACAAAGCCACCTAATCGTCAAAAATCTAAACCACGTGGCCATAAAAACTCTCCATCTTGCGCCTCAAACAGCAAGAAAacgagaaaaaataaaaagactgCAGAAAAAGCCATTAGAAAAAAGGCAGTTAACAACAGGAAGATTAAGAGAATTAGTAAGCTTAACAAAAGTACCCTGGGCAAACCCCCGACCACTCCGAATGCTCAGAATGGCGGCCAGGAGTCTTCACAAATACAGAAGATAAAGGTTGCTTTGCCTAAGAGCTTGGGGCCCGGTGAGGTTGTAGAAGCGCCTACGTTCCACCTCAGCGAAGCAGATTTTAgaGATCCGATTGCGTTTTTCGAGAAGGTGATGCCTTTTGCTTCGAAGTATGGACTGTGCAAGGTGGTGGCTCCAGAGAGTTTCAAGCCCACCTGCGTGCTCAGCGACGACATCAAGTTCAAAGTGGCGAACCAATATATAGCCAGATTATACAGCCGATGGGGCCCGGCTGCACGCGAGATGACCGCTATTAAAGCGTATCTCGCCACGCAAAACGTGCCGTTTGCCAGAGCGCCTTTGCGAGAAGGCTTGGAGCTGAACCTGCCGAAGTTGTACCACATCGTGCAACGCAACGGCGGCCTCAAGCAGGTGATGGAGAAGAAGCGCTGGAGCCGCGTCGCCCAGGAGATGAAGCTCATCAAGGGCTCCAACCCAGAGAAGGCGCTCGACCAGATTTACGTCAAGTACCTGTTGCCGTACGACATATTATCGAACCAGGAGCGGCAACAGATAATGAAGTCCGTAGAGAAATTCTGGAACAAGAAGAACCAGAAACTTCTGGACTGGGCCAACAACCCGCTGCACCGGCAGAAGAAACTGCTTGGCGAGTCCGAGTCGGAGTCGTCTGATGAGGAGGACGACGAGGCGGAGGACTCGCCCGAGGTCGCCGACGCGCTGCTGCAGGCGGAGGACTGCGTCATGCAGGGCAGGCAGATGACCTTGCCGTCTTTCAAAAAGGTGGCAGCAAAAGCCTTGGAGGTCACCTTCCCCGATTCGTCTACGCCGCCGACTACGCGCGAGGTGGAGACCGAGTACTGGCGACTGGTGCTGCTCGGCACCGAGCACGTGTGCGTCAATTCAGCGTCCATAGACACGGGCGACGGGGGATACGGTTTCAGCAAGAACAAGACAGAGCCGGAAGGCTGCCACCCGTGGAACCTGAAGatgcTGAGCAAAAACCATCTGAACGTGCTCTCCTCCCTGGGCGCCGTGCTCGGCGTGACCGTGCCGACGTTCCACCTCGGCATGGTGTTCTCCACCTGCTGCTGGCACCGCGACCCGCACATGCTGCCCTGGGTGGAGTTTATGCACAACGGACCTCCCAAAATATGGTATGGGATCCCGAATGAGCAGAGTGCCAACTTCCGCAAGGCCGTTGAGACGCTTTGCCCGACCTCGTGCCAGAACAAGTCCATCTGGCTCCCGTCGGACATCACAATGATCCCGCCGAACCTGCTGCGCGAGCACCACGTATCGCTTTCAaggGTGGAGCAGAAGCCAGGAGAATACATTATTGTGTTCCCTACAGCATATTCGTGCTCAATCTCCACCGGCTACACCGAGTCGGAGAGTGTATACTTTGCGACCAATTCCTGGTTCAAGACCATGCAACAGGTGTTCCAGGAGGTGCGCGACAGCTGCGAGCCGACGACCTTCTCCCTGGAGCAGTTGTTGATCGCGCTGGCGCGGGACCCCACCGTGTCGCTGAGCGTGCTGCAGCAGGTGCACGCCAGCCTCAGTACCATCGTCGACGAGGAGCTGAGGAACCGCAACCAGATGATGGCGCTCGGGGTGCAGATTCGCACGTGCAACCAGATGAACAAGCGGCCGGGCACGTGGAACGTGCGCGAACAGAACGAGTGCGAGATATGCCGCACCACGCTCTACCTGTCCATGGTGACTGGCGTGATCGGCAAGAAATCCTCCGTGTGCCTGCAGCACGCCGTCCGACTTTTGGAGATGCCAAAGAACAAGCATCTGGACTTGTCCGTCCTTGAGCTCGTCATCTTTTACGCCGAGGACACACTCTTGGATATTATTACAGAGGTGCAAAAACGTCTGTCTCATTAA
- Protein Sequence
- MFLSSLFFTEEEINEAELNSEEEVNEAEFNSPQNNGREDIHFWNDSGVVPDITESRCPIENHMTLRDVYNAPAYIKDRFCHSCSNCKRLLKIDKLSKLMLIPQRPASDVYEFDAEREASDCGPSAYRKRGGNRTTEASGSSKEHCKYFDLLPPENPHYILQLRLVEIPNKENENQKIIRANLVPKSNDIQTEDICLVQHEDLVDGLIRFMTETEQTETATKPQKSLSHPKIPGTNDVQNEVAASNGNPTRPPNRQKSKPCGHKNSPSCASNSKKTRINKKTAEKDIRKRAVNNRKIKRISKLNKSTLGKPPTTPNAQNGGQESSQIQKIKVALPKSLGPGEVVEAPTFHLSEADFRIPNKENENQKIVQHEDLVDGLIRFMTETTTKPQKSLSHAKIPGTNDVQNEVAASNGNPTKPPNRQKSKPRGHKNSPSCASNSKKTRKNKKTAEKAIRKKAVNNRKIKRISKLNKSTLGKPPTTPNAQNGGQESSQIQKIKVALPKSLGPGEVVEAPTFHLSEADFRDPIAFFEKVMPFASKYGLCKVVAPESFKPTCVLSDDIKFKVANQYIARLYSRWGPAAREMTAIKAYLATQNVPFARAPLREGLELNLPKLYHIVQRNGGLKQVMEKKRWSRVAQEMKLIKGSNPEKALDQIYVKYLLPYDILSNQERQQIMKSVEKFWNKKNQKLLDWANNPLHRQKKLLGESESESSDEEDDEAEDSPEVADALLQAEDCVMQGRQMTLPSFKKVAAKALEVTFPDSSTPPTTREVETEYWRLVLLGTEHVCVNSASIDTGDGGYGFSKNKTEPEGCHPWNLKMLSKNHLNVLSSLGAVLGVTVPTFHLGMVFSTCCWHRDPHMLPWVEFMHNGPPKIWYGIPNEQSANFRKAVETLCPTSCQNKSIWLPSDITMIPPNLLREHHVSLSRVEQKPGEYIIVFPTAYSCSISTGYTESESVYFATNSWFKTMQQVFQEVRDSCEPTTFSLEQLLIALARDPTVSLSVLQQVHASLSTIVDEELRNRNQMMALGVQIRTCNQMNKRPGTWNVREQNECEICRTTLYLSMVTGVIGKKSSVCLQHAVRLLEMPKNKHLDLSVLELVIFYAEDTLLDIITEVQKRLSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -