Mfus006967.1
Basic Information
- Insect
- Mesopsocus fuscifrons
- Gene Symbol
- stc_1
- Assembly
- GCA_950004255.1
- Location
- OX465376.1:937058-948453[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.5 1.4e+04 -3.7 1.8 15 18 251 254 250 255 0.73 2 14 1.9 1.7e+04 -4.0 1.6 15 19 278 282 277 282 0.81 3 14 0.22 2e+03 -1.0 1.7 4 10 311 317 309 326 0.78 4 14 1.9e-05 0.17 12.0 21.0 4 19 327 342 317 342 0.92 5 14 1.8e-09 1.7e-05 24.8 10.0 1 19 378 396 378 396 0.98 6 14 1.7e-05 0.15 12.1 15.8 1 18 436 453 436 454 0.92 7 14 2.4e-06 0.022 14.8 12.6 1 19 498 520 498 520 0.87 8 14 1.8 1.7e+04 -4.0 0.8 5 10 549 554 549 554 0.90 9 14 0.0012 11 6.1 8.1 1 11 560 570 560 571 0.97 10 14 1.1e-05 0.097 12.8 15.7 1 19 587 605 587 605 0.99 11 14 2 1.8e+04 -4.5 0.9 6 10 634 638 634 638 0.87 12 14 2 1.8e+04 -7.1 13.2 4 19 646 662 644 662 0.75 13 14 3.5e-06 0.032 14.3 13.9 1 16 698 713 698 723 0.87 14 14 0.041 3.7e+02 1.3 16.6 1 19 730 749 730 749 0.97
Sequence Information
- Coding Sequence
- ATGACCCAAAGAAGTGCCGAGAGTTTGGAAGCGGTCGCAGCCCGCTCCAACTTGGTAGCTACAGCTGGGGAATTTATTCCTAGAGCTTTCCGTACTGCTGCTGGTAGTGCAGAAACCCAGCATTTTGACGAGAATGACGGCTCCCAAGCCTCCAGTGGGTACGTTCGCAGCAATGAGTATTATTCACGGAATCGTGAACCAAAGTATTCCCGAGCTAGCGGTGGAAGAGCGAAGAGGAACGAGCGGGAAGTTGTTGGACCTCCCCTTCAAGATGGAAGACTGTGGCGAGATGGAAATCGGGAAGGGAAAAGGAAAGACCAATGGGCGGATAGTGAGTTTCAGGCCCATGCTTCGGGAGCAAGGGGTCGGCAGAAAGACTCTAGGGAAGGTGTCCAGTATTCTGAAGGTCCTTCTGAACCTGGGAATAGTGATCCGCAAAGGGCAAACAGTGGTATCACGCCTAGAAATGGTCCGCGACCAAGGCGACCAAATGGACAGTATGTTTCCCAAAACGGAGATCACCGCAACTACAACGGTAGAAATAACTCGGAGGATAAAGTAGTAACGCCTAAACCTCCCAAGGAGAACGTCAAAAACCATGGGCAGGCCTTCAGGTCAAATGAAGAGCAGAGGAACCAATCGGAGACGGGGAAGAACCAGATGGAAGTGCTGATTGGCCAGTTGACGCGTGGCACTCTCGAGTGCCTGGTATGCTGCGACCACGTGCGTCAGTCTCAATCCACGTGGAGCTGCCCCGTGTGTCACCACGTCATGCACCTGAGATGCGTCACGAAGTGGGCCAAGTCATCAAGGGCCGAAGAAGGTTGGCGGTGCCCTGCATGTCAGCACGTTTCCAGCGACACCCCAGCGGAGTACCGCTGTTTCTGCGGGAAGGCAGTGGAGCCTTCCTGGAACCGAGCTGACTGCCCGCACTCGTGCGGCGcagtgtgtgggcagcagcgcCCCGCTCCATGCCCGCACAAGTGCACGCTGCCTTGCCACCCCGGACCGTGCCCGCCATGCCAGCTGTACATGAGCCGGGAGTGCGGGTGTGGCCGTGCTTCCCGCACTGTGCCGTGCGCTGACGGTGAGGCTGTCCAGTGCGGCGCTCCCTGCCGCCGGACCCTCAACTGCGGCGTGCACAAGTGTGCAATGCTGTGCCATAGGGGCGACTGTGAGCCGTGTAGTGAGACTGTGGCTCAGGaATGTTTCTGTTGGTGGAAGAAGCGGGAGGTGGCCTGTACTAAGGAGACAGCAGGTGTGGAGGCCTTTTCTTGCAGGACGACTTGCTCTAAAATACTCAGCTGCGATAGCCATGGATGCACCCTGAAATGCCACGAagGACCATGCCCTCCGTGTGGACTTCTTCCAGGCAGAATCAGTCACTGCCCGTGCGGTAAAAGTTCGTTAACTCAACTcaaattcgaacccaggaatAGCTGCACCGACCCTATTCCGACCTGCGGGAATCTCTGCGGGAAACAGCTGGCTTGCGGAGAACCTGGTGCTCGGCACGAGTGTGAGAGTGAGTGTCACATCGGTGCATGTCCCCCCTGCACTAAGGAGACGAATGTGCGGTGCAGGTGTGGCCACATGAATAAAGCGCTGCCGTGCTCTCAACTGCTGGCGCGATCCGATGACGCTCGGTGTGACCGAAAGTGCAATAAGCTACGAAGCTGCGGTAAGCACAAATGTCGGGAGCCATGCTGCATCGACGTAGACCACCTGTGCCTACTGCCTTGCACGCGGACTCTGAACTGCGGCCTGCACCACTGCGGAGCTCCTTGCCACATGGGCTACTGCCGCCCCTGTCCTCGAGACTCCTTCCAAGAGCTGTCTTGCGAGTGCGGCGCAGAGGTGAAGCTCCCCCCTGTGCCGTGCGGGTCTCGCCGCCCCATGTGCTCCCGCCCGTGCACGCGCGCTCATCCCTGCACGCATACTCCTACGCACACCTGTCACTCTTCACCTAAATGCCCGCCCTGTACTTTGCTGGTGTCGATGTGGTGTCATGGCGGCCATGAGCTGCGAAAAGCCGTGTTCTGCCACATGCAGGCGTTCTCCTGCGGCATCGCCTGCGGGAAAGCCTTACCTTGCGGACGGCACAGCTGCCCCCTCCCCTGCCACGCGGGACCTTGTCTGAAGGACGGACAGTCGTGCACGCTGCCCTGTCTAGTGTCACGTCCAGGCTGCGGCCATCCCTGCGGCGTCTCCTGCCACGAACCGCCCTGTCCTGATGCCCCGTGCAAGGAAATGGTTAAGGTGAGCTGTGAATGTGGTCACCGTTACAGCACACGAGTCTGTGTAGACAATGCGCGGGAATATCAGCGCATTGCTACTGCGCAGCTAGCTTCCAAGATGGCGGACCTCGCTGCTGGACAGACTGTGGACTTGAATGAGGTCGCCACCAGTAGTAAGAAGATATCCTTTAAAACGTTAGAGTGCACCGAGGAGTGCAAAGTACTGGAGCGGAATAGGCGTCTTGCTGTAGGTCTCCAAATACGCAACCCAGACCTCTCGGCCAAGCTGACCCCCCGATATTCCGACCTCCTACGCCAATGGGCCAAGAAAGACGCGCGCTTCTGTCAGATGGTCCATGACAAACTCACTGACTTGGTCCAACTGGCCAAACAGTCTAAACAAAAGTCTCGAAGTTACTCGTTCGACTCGATGAACTGGGAGAAGAGACAGTTTGTGCACGAGTACTGTCAGCACTTCGGCTGCGAGTCTGTGGCCTATGACCAGGAGCCTAATCGTAATGTCGTCGCTACGGCACTCAGAGATAAGtctTGGTTGCCGGGGCTGTCTCTGCTAGAGGTGATACAGAGAGAAAATGGTGCTCGAAAAGTTCCTCTGCCTTCAAACGCCAAATCAAAACTGGTGCCTACTCTAAAGTCTATGGAAGTTTTACCTATGAAGGTGCCTAGTGCTTCAGGTGCTTCAGGGTCGGCTTGGGGTCAGCCTACCGCCCCCCCTGGCCCTTCCGCTCACTCCGCCTCTGCGTCCACTACGGACTTTCACCCCCAGGTAGACTATTTCGATATGGCGCCTCTAGAGTAG
- Protein Sequence
- MTQRSAESLEAVAARSNLVATAGEFIPRAFRTAAGSAETQHFDENDGSQASSGYVRSNEYYSRNREPKYSRASGGRAKRNEREVVGPPLQDGRLWRDGNREGKRKDQWADSEFQAHASGARGRQKDSREGVQYSEGPSEPGNSDPQRANSGITPRNGPRPRRPNGQYVSQNGDHRNYNGRNNSEDKVVTPKPPKENVKNHGQAFRSNEEQRNQSETGKNQMEVLIGQLTRGTLECLVCCDHVRQSQSTWSCPVCHHVMHLRCVTKWAKSSRAEEGWRCPACQHVSSDTPAEYRCFCGKAVEPSWNRADCPHSCGAVCGQQRPAPCPHKCTLPCHPGPCPPCQLYMSRECGCGRASRTVPCADGEAVQCGAPCRRTLNCGVHKCAMLCHRGDCEPCSETVAQECFCWWKKREVACTKETAGVEAFSCRTTCSKILSCDSHGCTLKCHEGPCPPCGLLPGRISHCPCGKSSLTQLKFEPRNSCTDPIPTCGNLCGKQLACGEPGARHECESECHIGACPPCTKETNVRCRCGHMNKALPCSQLLARSDDARCDRKCNKLRSCGKHKCREPCCIDVDHLCLLPCTRTLNCGLHHCGAPCHMGYCRPCPRDSFQELSCECGAEVKLPPVPCGSRRPMCSRPCTRAHPCTHTPTHTCHSSPKCPPCTLLVSMWCHGGHELRKAVFCHMQAFSCGIACGKALPCGRHSCPLPCHAGPCLKDGQSCTLPCLVSRPGCGHPCGVSCHEPPCPDAPCKEMVKVSCECGHRYSTRVCVDNAREYQRIATAQLASKMADLAAGQTVDLNEVATSSKKISFKTLECTEECKVLERNRRLAVGLQIRNPDLSAKLTPRYSDLLRQWAKKDARFCQMVHDKLTDLVQLAKQSKQKSRSYSFDSMNWEKRQFVHEYCQHFGCESVAYDQEPNRNVVATALRDKSWLPGLSLLEVIQRENGARKVPLPSNAKSKLVPTLKSMEVLPMKVPSASGASGSAWGQPTAPPGPSAHSASASTTDFHPQVDYFDMAPLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -