Basic Information

Insect: Mesopsocus fuscifrons
Gene Symbol: zag-1_1
Assembly: GCA_950004255.1
Location: OX465375.1:14403632-14405695[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.39 25 5.6 1.6 2 23 60 82 59 82 0.87

2 17 0.0014 0.09 13.3 1.0 2 23 87 109 86 109 0.92

3 17 0.08 5.1 7.8 1.0 1 23 114 137 114 137 0.96

4 17 0.00015 0.0096 16.4 3.0 2 23 144 165 143 165 0.95

5 17 0.002 0.13 12.8 2.9 1 23 171 194 171 194 0.96

6 17 0.00019 0.012 16.0 0.2 1 23 200 222 200 222 0.97

7 17 0.00028 0.018 15.5 0.4 3 23 230 250 229 250 0.97

8 17 0.00034 0.022 15.2 1.1 3 23 258 279 256 279 0.96

9 17 7.4 4.8e+02 1.6 0.0 2 23 319 339 318 339 0.86

10 17 0.1 6.4 7.5 0.1 2 23 346 368 345 368 0.94

11 17 0.67 43 4.9 1.9 2 23 373 395 372 395 0.95

12 17 0.017 1.1 9.9 1.2 1 23 430 452 430 452 0.97

13 17 0.0027 0.17 12.4 2.9 1 23 458 481 458 481 0.95

14 17 0.022 1.4 9.5 0.3 3 23 489 509 488 509 0.92

15 17 4.6e-05 0.003 18.0 0.7 1 23 515 537 515 537 0.98

16 17 0.00013 0.0081 16.6 3.4 1 23 543 565 543 565 0.98

17 17 1.6 1e+02 3.7 0.8 1 12 575 586 575 595 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.39	25	5.6	1.6	2	23	60	82	59	82	0.87
2	17	0.0014	0.09	13.3	1.0	2	23	87	109	86	109	0.92
3	17	0.08	5.1	7.8	1.0	1	23	114	137	114	137	0.96
4	17	0.00015	0.0096	16.4	3.0	2	23	144	165	143	165	0.95
5	17	0.002	0.13	12.8	2.9	1	23	171	194	171	194	0.96
6	17	0.00019	0.012	16.0	0.2	1	23	200	222	200	222	0.97
7	17	0.00028	0.018	15.5	0.4	3	23	230	250	229	250	0.97
8	17	0.00034	0.022	15.2	1.1	3	23	258	279	256	279	0.96
9	17	7.4	4.8e+02	1.6	0.0	2	23	319	339	318	339	0.86
10	17	0.1	6.4	7.5	0.1	2	23	346	368	345	368	0.94
11	17	0.67	43	4.9	1.9	2	23	373	395	372	395	0.95
12	17	0.017	1.1	9.9	1.2	1	23	430	452	430	452	0.97
13	17	0.0027	0.17	12.4	2.9	1	23	458	481	458	481	0.95
14	17	0.022	1.4	9.5	0.3	3	23	489	509	488	509	0.92
15	17	4.6e-05	0.003	18.0	0.7	1	23	515	537	515	537	0.98
16	17	0.00013	0.0081	16.6	3.4	1	23	543	565	543	565	0.98
17	17	1.6	1e+02	3.7	0.8	1	12	575	586	575	595	0.86

Sequence Information

Coding Sequence: ATGAACGGAAAGAGTAGATGTTTTCAACAGTCCCTCGTCTCATCAGATGATCATCTGCGGCAGACGGACGTGCCAGCACGAAGACAGCGGCGAGTGCCATGCTCAAGATGTGGCGAGCTGATCCGGATTAGTGAACTTGATGCCCACGACGAGCGCCATGCCTCCTTCCCTAAGATGCCATGCGGCAAGTGCAGTAAAGTGTTTGTCTGCCACGTTGCTCTGAAGAAACACGGCGTTCGTGTCCATGGAAACGCTCTAAAGTGTGACGTATGCTTTCGCGTTTTTACGAAATCAGGATACTATTTCAGACACGTTACGTATGGTCATgctgaaaagaaattttcctgCCGATCTTGCAGCTATGCCACACCCGAGCGGAATCAACTGCGAATGCATATGGAGAAGCGCCACCTAAAAAACTACACTTTACATTGCAAGGTTTGCGGAAAaggcttttttgacaaaagcaGCTTACGAGAGCATGAACACGTCCATACCGGTTCAACTCCGTACCAGTGTGAGGCCTGTGGAGTCAGCTTTAAATTGAAATGCACTCTACGAGCACACCAATTTCGTTTTCATGCCCATTTATTTCCTCATGTCTGCACCATCTGTAAAAAAGGTCTGTCAACAGCTAAAGGGTTAGCTGCACACATTAAATTGCATGCCGAGGATAGGAAACCAATGTGTGACGTTTGCGGGAGGCAGTTGAAAACATCGAGGAGTTTGGAGGAACATCTACGACTCCACACTGGTGAACGGCCGTACGGGTGTCAATTATGCACAAAAGCATACCCATCCCAGAAACACTTGCTGCGCCATGTTAGGCTCATGCACAGCGTGCAGCAGCCACGGCGCCTGAGGGTACGAAAGCGAAGAAAGTGCAAGAAAACAAGACATACTCAAAAACGCAAGCGACttgaggaaaatggaaaaaagtaCATTCCAAGAGTAACTTGCGAGCTGTGTGGTGCTAGAATTCGAGCCCAAGATATAGAGGACCATCTTTACACACATCGCGTCAACCCTAAACTGCCCTGTCCCGATTGCAGCAGCGTCTTTGCCGAGGCAGGAGCTTGGCATGCTCACAGGCACCGCGTTCACAGTCACACGCTACGATGTGAAACCTGTTGTCGCGTTTACAACAACTTGCCACGATTCTTGCGTCACATTCGATACGGCCACGCTCTTAAAAACATAGTGTGTTCTATTTGCCACGTTTTTTCTACCAATCTATCCACGAGAATGAGGTTGCATATCGAACAAACACATCTCAAGAAATATTCTTACTATTGTGACGTCTGTTCCAAGGGTTTCTTTGAAAGACACTCCATTATCGAGCATTTAAATTTGCACTCGGGTGAAAGACCACACCAGTGTGAAACATGTGGCAAAAACTTTTCCCTGGGAACTACCCTCCGAGCACATCGGTTCCGAAAACATCCTGAACTATTCGACAATGTTTGCATCATTTGCTCTAAAGGTTTTGCTACGCGGGAGGGCCTCGTGGCGCACACACAGCATCATCAGGTCGCCAGGCGATTTACTTGTGATTTTTGTGGGAAGCAGCTGACTACAGCGGCCACTTTACGTGAGCATCGCCGACTCCACACTGGCGAGGCACCGTATACGTGCTCACTGTGCCCACGTGCGTTTTGCGCGAAAAAACACCTGACGCGTCATGTTGCATCTCACAGCGGCCTTCAGACGTCTCGAAAAAACCATGAATGTTTGCACTGCCGCAAGACGTATGCCACAATGGAAGCTTGCCTCATTCATTCCAAGAAGTGTCCCGTCGCCGAAGTGGCCATTTCTTGA
Protein Sequence: MNGKSRCFQQSLVSSDDHLRQTDVPARRQRRVPCSRCGELIRISELDAHDERHASFPKMPCGKCSKVFVCHVALKKHGVRVHGNALKCDVCFRVFTKSGYYFRHVTYGHAEKKFSCRSCSYATPERNQLRMHMEKRHLKNYTLHCKVCGKGFFDKSSLREHEHVHTGSTPYQCEACGVSFKLKCTLRAHQFRFHAHLFPHVCTICKKGLSTAKGLAAHIKLHAEDRKPMCDVCGRQLKTSRSLEEHLRLHTGERPYGCQLCTKAYPSQKHLLRHVRLMHSVQQPRRLRVRKRRKCKKTRHTQKRKRLEENGKKYIPRVTCELCGARIRAQDIEDHLYTHRVNPKLPCPDCSSVFAEAGAWHAHRHRVHSHTLRCETCCRVYNNLPRFLRHIRYGHALKNIVCSICHVFSTNLSTRMRLHIEQTHLKKYSYYCDVCSKGFFERHSIIEHLNLHSGERPHQCETCGKNFSLGTTLRAHRFRKHPELFDNVCIICSKGFATREGLVAHTQHHQVARRFTCDFCGKQLTTAATLREHRRLHTGEAPYTCSLCPRAFCAKKHLTRHVASHSGLQTSRKNHECLHCRKTYATMEACLIHSKKCPVAEVAIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -