Mfus006608.1
Basic Information
- Insect
- Mesopsocus fuscifrons
- Gene Symbol
- ZFX_2
- Assembly
- GCA_950004255.1
- Location
- OX465375.1:19904322-19909101[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 1.9 1.2e+02 3.4 0.1 2 23 6 27 5 27 0.94 2 16 0.0041 0.27 11.8 1.2 1 23 507 530 507 530 0.94 3 16 0.0034 0.22 12.1 0.1 1 23 537 559 537 559 0.98 4 16 0.071 4.5 8.0 2.1 3 23 591 612 590 612 0.95 5 16 0.0014 0.092 13.3 1.1 1 23 617 639 617 639 0.98 6 16 0.00014 0.0093 16.4 1.3 2 23 642 663 641 663 0.97 7 16 6e-05 0.0038 17.6 0.5 1 23 669 691 669 691 0.97 8 16 1.8e-05 0.0011 19.3 4.7 2 23 698 719 697 720 0.94 9 16 0.074 4.7 7.9 1.2 6 23 734 751 732 751 0.96 10 16 0.0073 0.47 11.0 1.8 2 23 757 779 756 779 0.96 11 16 0.00032 0.02 15.3 0.1 2 23 796 816 795 816 0.97 12 16 0.00023 0.015 15.8 1.2 1 21 822 842 822 844 0.92 13 16 0.86 55 4.5 1.2 1 23 852 874 852 874 0.91 14 16 0.0015 0.093 13.3 2.6 1 23 880 902 880 902 0.96 15 16 8.8e-06 0.00056 20.2 1.7 1 23 908 932 908 932 0.98 16 16 0.00095 0.061 13.8 6.1 1 23 938 960 938 960 0.98
Sequence Information
- Coding Sequence
- ATGAATCAGCTGCAAGAATGCCCTGTATGCACTCTCTATTTGAGGCCTGGCATTTCACTGAAGACACATCTCGACACCCATCCGAAGGACCAGGTTATCGATGCTTTATTACGGGCCAAGGAAGATAGGGGGGACGCGGAGACCCCCGCCGGGGGGCCGGGGACCCCACTCCTGCAGCCCCAGATGACGACCGCTGTTACCTACCAGCAGATACTCACTACCAACTCCTCCGGTGCTGTTGTTCCCCAGTTCCTACAgGTTCCTGCATTGGTCAACTCCTCCTACGGCGTTTCGCAAAACATGGGGTTTGCTCCGACGCTGTTCAATCCTATGTACAATCCGTACATACCTCAACCGTATTCCTTCGGCACTGCCCCTGTAAACACCACTCAAGCTCAAGATATCACCGAGGAGGAACCAACAATGGTCCCCAACGAAGAAGTTGGGAGTGAGATGGACCTCAGTGACGGGTCCCCTGTGGGTCCGAGCGCCCCCTCGTCTCCCTCCCCACCCTCTCCCCCACCACCGCCTCCCCCCCGCATCCCCGCAGCCTCCGTGATCATTGCCCGCTCCCACCACTCCCGCCCTGCCCCTTCTCCGCCGCCCTTACAGCGCAGCCCTTCCGGAGTGTCTTCGCCCCCCTCTCCTGTCTTCTCGACTTCGTGTGCCTCACCTACCTCCTTcccacctccccctcccctagtCTGCAAAGCAGAAGACAGCGTCATTGTTGAGCCTAGCTCAAACCAAAAGCCATCAAGGCAGAGGGAGGATGTCAAAATCGATGTGTGTAAAACGGAGCGAAAGGTGGCATCGGAATCAGAGCAGCACTCGTGTCATCGCTCCGACACAAACGCCACGTCGTTCAACGACCACGAAATAATCGCTCATTTGACACGCTTCCAAGCGAAGCTGCCCAGCGATGAAGTGGACTCGTTTGTTCCTCATCCCGAATTAAAAGATAACGGTGACGGGATTCTGGTGTGCCAAATATCCACAGATGAGCTGCATGAGCTGAGTTTGTCGCGGAACGAAATGAAGGACACATCGGAGGAGGACCTGGGTTTCTCCTACTCGGACGACGCTGCCAATTTTGACGAACCTGGCAGTTCCGGTGTGGTGTATGCTGATCTGGTGCCCTCCTCCAGCCCACGCCTTCTCCATGATTTGCTCCCCGCTACCAGCTCGCGCTTGCTTCAAGATCTCATGCCTACTGCGTCCTCGAGCAACGCCTTTATGGAGCTCGATGGGATCCGTATTTTCTTCAATGGAAGCTCCGCCTTGGCCGAAGCATCCCGGGTGCCGTCCCCTCCCTCTGTCATCCAGATGGCGGACTCTACGAAAGCGGATATGTCTCCCATGCCGCTGAACATCACAGCGGACGAGTCGATGCCTGCCAGGGGCGAGCTGTCTGAGCAGGAGAGTCTGGGCGCGGACTCAGCATGGGGATTATTCCAACAGGACGTGAAGATGGACGTGTGGCCGCCCCCGTCCTCACCGCCCATTGACGGGAAGCCGTTCCGCTGCTCTGACTGCCATGTGAGCTTCGCCGACGCGAAGGAGCGGCGCGCTCATAAACTTCAGATGCACACCAAACCCGGTAAAGTTTTCAAATGCGTGGCGTGCGGAGCCGTGTTTTCTACCTTGCGGGACCGGCGCTCGCATATGGCTGTTCACGCGGCCATCAAAACCCTGAAGGAGGAAGGTGATCGCCCGAGCAGGACGGCTGTGCTTACTGCCCCTGGGGAGGTCTCATCCACTGCCAAACATTGCCATACTTGCGCAGGGTCCTTCCCGTCCCTGCGAGAGCTTCGAGTACATCTCAGAGAAACCCATGGCGAAATAAGGTTCAAATGTGACGAGTGCGAGACTTGTTTCGATGAAGAGGTCGAGTTCAACCTCCACCTAAAGGTCCATCCTCTGAAATGTACGGAGTGCGCCAAACTTTTCTACAGGCGCGCCAACCTGAGTCTGCACATGAAGCGCCACCTACCCGTCAAACCGTTCGAGTGCTCGCTCTGCCCCAAATCGTTCATAACGAGACAGAAATTAGAGGAGCACACGAACGGGCACACGGGTGTCAGGCCCATAAAGTGCGTACAGTGCGACAAAACGTTCAGCCGTCACTCCAATCTCATTCAGCATAGGAATCTTCACCATCCCAAAACTAAGCGCAAGacGAGGGATTATGTGTGCCGGTGCGGGGAGGTCTTCCACAGCCAGCGGAAACTCGAGTGGCACCGCGAGATCCATGACAACAAACCCAAGTCGTGCCCGTTCTGCGCGCAGAAATTCATCCATTCTGCGAGTGTAACGCGCCACGTTCGCCGCTCACATTTTCCAGAATATCTGCCCGACGTCTCAGGCCGTGAATATGAGAATGTGTCTTGTCCTATCTGCGACCGTGTCTACCTCCGCAGCTCTCTGTCCGTCCATATGCGAGTTCACAACGGGGAGCGTCCGTTCCAATGCAACGTCTGTTCCAAACAGTTCACGACGAAATGGAACATGGAGCTGCACCAGTGGACACATCAGTCCCGCAGCGCCATGCCGTACAAATGCACCCAGTGCAAGAGTGCGTTCTTTCGCGAGGCTGACCACTTGGCCCATCTCAACGCCCACCGCAACCTCAAGCCTTTTATATGTAACGTGTGCGGACAAAAATTTATCCGGAAGTATAACTGTTTAAGACACCAAGAGGAACACAAGCGGGCTAAACGGTTTACGTGTCCGATATCTAATTGTGGGCGTGCTTTTCACCGTAGTTACTATTTGAAAGATCATATGAAAGTCCACACTGGGCTAAGACCTCATACGTGCCATATTTGTGGAAAAGCTTCAAGCACCAAATCGAATCATAATAAGCATGTTAGGATTCATGATACTAGGGAACTCGTTAACACGGAAAATTAA
- Protein Sequence
- MNQLQECPVCTLYLRPGISLKTHLDTHPKDQVIDALLRAKEDRGDAETPAGGPGTPLLQPQMTTAVTYQQILTTNSSGAVVPQFLQVPALVNSSYGVSQNMGFAPTLFNPMYNPYIPQPYSFGTAPVNTTQAQDITEEEPTMVPNEEVGSEMDLSDGSPVGPSAPSSPSPPSPPPPPPPRIPAASVIIARSHHSRPAPSPPPLQRSPSGVSSPPSPVFSTSCASPTSFPPPPPLVCKAEDSVIVEPSSNQKPSRQREDVKIDVCKTERKVASESEQHSCHRSDTNATSFNDHEIIAHLTRFQAKLPSDEVDSFVPHPELKDNGDGILVCQISTDELHELSLSRNEMKDTSEEDLGFSYSDDAANFDEPGSSGVVYADLVPSSSPRLLHDLLPATSSRLLQDLMPTASSSNAFMELDGIRIFFNGSSALAEASRVPSPPSVIQMADSTKADMSPMPLNITADESMPARGELSEQESLGADSAWGLFQQDVKMDVWPPPSSPPIDGKPFRCSDCHVSFADAKERRAHKLQMHTKPGKVFKCVACGAVFSTLRDRRSHMAVHAAIKTLKEEGDRPSRTAVLTAPGEVSSTAKHCHTCAGSFPSLRELRVHLRETHGEIRFKCDECETCFDEEVEFNLHLKVHPLKCTECAKLFYRRANLSLHMKRHLPVKPFECSLCPKSFITRQKLEEHTNGHTGVRPIKCVQCDKTFSRHSNLIQHRNLHHPKTKRKTRDYVCRCGEVFHSQRKLEWHREIHDNKPKSCPFCAQKFIHSASVTRHVRRSHFPEYLPDVSGREYENVSCPICDRVYLRSSLSVHMRVHNGERPFQCNVCSKQFTTKWNMELHQWTHQSRSAMPYKCTQCKSAFFREADHLAHLNAHRNLKPFICNVCGQKFIRKYNCLRHQEEHKRAKRFTCPISNCGRAFHRSYYLKDHMKVHTGLRPHTCHICGKASSTKSNHNKHVRIHDTRELVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -