Basic Information

Insect: Mesopsocus fuscifrons
Gene Symbol: su(Hw)_1
Assembly: GCA_950004255.1
Location: OX465373.1:2558219-2566164[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.013 0.82 10.3 0.2 1 20 83 102 83 104 0.91

2 13 0.036 2.3 8.9 0.1 2 23 132 154 131 154 0.95

3 13 6.9e-05 0.0044 17.4 0.2 1 23 160 182 160 182 0.98

4 13 0.0011 0.068 13.7 2.1 2 21 189 208 188 209 0.93

5 13 4.6e-07 3e-05 24.3 0.4 2 23 221 242 221 242 0.97

6 13 0.079 5.1 7.8 1.0 1 23 252 275 252 275 0.97

7 13 1.5e-05 0.00097 19.5 1.9 1 23 281 303 281 303 0.99

8 13 1.4e-05 0.00088 19.6 0.8 1 23 309 331 309 331 0.98

9 13 2.3e-05 0.0015 18.9 2.6 1 23 337 359 337 359 0.96

10 13 8.4e-05 0.0054 17.2 4.9 1 23 365 388 365 388 0.97

11 13 0.00064 0.041 14.4 2.4 2 23 395 416 394 416 0.96

12 13 2.8e-06 0.00018 21.8 0.2 1 23 422 444 422 444 0.98

13 13 8.6e-06 0.00055 20.3 2.7 2 23 451 473 451 473 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.013	0.82	10.3	0.2	1	20	83	102	83	104	0.91
2	13	0.036	2.3	8.9	0.1	2	23	132	154	131	154	0.95
3	13	6.9e-05	0.0044	17.4	0.2	1	23	160	182	160	182	0.98
4	13	0.0011	0.068	13.7	2.1	2	21	189	208	188	209	0.93
5	13	4.6e-07	3e-05	24.3	0.4	2	23	221	242	221	242	0.97
6	13	0.079	5.1	7.8	1.0	1	23	252	275	252	275	0.97
7	13	1.5e-05	0.00097	19.5	1.9	1	23	281	303	281	303	0.99
8	13	1.4e-05	0.00088	19.6	0.8	1	23	309	331	309	331	0.98
9	13	2.3e-05	0.0015	18.9	2.6	1	23	337	359	337	359	0.96
10	13	8.4e-05	0.0054	17.2	4.9	1	23	365	388	365	388	0.97
11	13	0.00064	0.041	14.4	2.4	2	23	395	416	394	416	0.96
12	13	2.8e-06	0.00018	21.8	0.2	1	23	422	444	422	444	0.98
13	13	8.6e-06	0.00055	20.3	2.7	2	23	451	473	451	473	0.95

Sequence Information

Coding Sequence: ATGTCTACCACAGTGAAGAAGGAGACCAAGGGCGATCGCAGCGACCCTTATGATATCTCTCAAGATGCAGACATCATCAAGGATACGGATCGTGAGAAGCGGTATAGGAGAGCGaatcagaaaaagaaaaaggatgCAGCGGCTGTTAAAGCGAGGGAAAGCATGATGGTGAAAATGGAGCCCTCGGCTGAGCAGTCTACAATAGAAATTGAGGAAGTTGGTGTTGTGGTGAATGAAACGGGCGATTTCCTGTGCCCTACTTGCCCGAAAGGTTTCAAGACCTTGCTCGGGAGGCAGCGTCACATGGGGAAATGCCGCGCGTCCGTGATAGATGAAGGCAACTGTCCCTGCTGCCACGAAAACGTCAACAGCGCTCATCAGGAAGGAGAGTTAGAATGCAGTGAGTGTAGTGGGTATTTCATCACTGAGGAGAAGCTGGCGCACCACATAGAAGTCATTCACAAGGCAGGCACGACTTTCAGCTGCGCCGTCTGTCCAAGACTCTTCTCCACCAAACCGCACCTCGTCGCCCACTTGGCCACTCACGGTGATGAAAAGCCATGGATGTGTAAGAATTGTAACTCGGTGTTCACCCGGAAATATCACCTGGATCGCCATTTCCGCCAATCCGGCTGCGACGGACTTCCGCAGGAAACCAACGTCTGCCAGGTATGCGGGCGCGAGTTTACCCGGAAAGACAACCTCCGGGAGCATTTGCGCGCGCACGCGGGCATCAACAGACGTCTCACCGTCTACACATGCGAGTTTTGTAACGAGGCAATTGCCGGGCTCCACAACTTCAACATGCATAAGCGAAACCTGCATGTGGGGGACCGCCCGTACAAATGCTCCTACTGCCCCTTCTACTTCCCAACCAGCGGTGCCATGAAGAAGCATCAGCGCAGACATACCGGCGAGAAGCCGTACGAGTGCCGAGAGTGCTTTAAGAAGTTCGCCGCGAAGGAGACTCTGAACCGTCACATGATGATTCATACGAGGGAGCGCCCGTTCAAGTGTCAGGTCTGTGGCAGAGGCTTCATTCAAAACACGCAGCTTCGCAATCACCTCTACCATCATACTGGAGAACAAGAGCACACCTGCAGTCGGTGCGGGGAGCAGTTCCGCCGGAAGCAGAAACTGAAGCTCCACATCAAGACCTTCCATAAGAAGGCGGAGCCGCTGGAGTGTGCCCACTGCTCCAAGCGATACTTCCTCAAGTCGGACCTCGAGAAGCACATGATGTTTCACACTGGGGACAAAGTATTCAAATGTGACATTTGCGGCAAGGAATTCGGACAAAGGCCGTACCTGCGAGCCCATCTGGTGACCCACACGAAGGAGCCGCCGCGGAGCTGTAACTACTGTAACCGCGCCTTCATACGGCAGGATTGCCTGCTGCGCCACATGCGCGCCAAGCACCGCGACAAGGTCGAACGCATTCTCGTCGAGGCTGAGCGAAAGAAACTCCAGCTGCAGTTGATGTCATTCGCCGGACGTGAGTCAGCCCTGCCTACAAGCGCCCCCCCGGCTGAGCTTGCTGACGCGCTGCCCGCCTCCATAGCTGACCTTCTCAGCATTCTTGTGGATGAAGACACGCTACAAAGCTTTGGCGCTCCTGACGCCCCCGTCGATGACGTTCTAAAAATGGTGATTAAGCGATGTGGGCACAGCCCTGTGGAGGACCCTCTGATGGAAGAACTGGATCGTCTCCGCGAGAACGCAAAACTTCTCTTCACGGTCGTAATTGATGATGCGGGTGTGAAGGCGTTACTGAACAACCAGTCCGTGGACGAAGTCATCCAGCACGTCCTTAACCTGGTTAAATCGTGA
Protein Sequence: MSTTVKKETKGDRSDPYDISQDADIIKDTDREKRYRRANQKKKKDAAAVKARESMMVKMEPSAEQSTIEIEEVGVVVNETGDFLCPTCPKGFKTLLGRQRHMGKCRASVIDEGNCPCCHENVNSAHQEGELECSECSGYFITEEKLAHHIEVIHKAGTTFSCAVCPRLFSTKPHLVAHLATHGDEKPWMCKNCNSVFTRKYHLDRHFRQSGCDGLPQETNVCQVCGREFTRKDNLREHLRAHAGINRRLTVYTCEFCNEAIAGLHNFNMHKRNLHVGDRPYKCSYCPFYFPTSGAMKKHQRRHTGEKPYECRECFKKFAAKETLNRHMMIHTRERPFKCQVCGRGFIQNTQLRNHLYHHTGEQEHTCSRCGEQFRRKQKLKLHIKTFHKKAEPLECAHCSKRYFLKSDLEKHMMFHTGDKVFKCDICGKEFGQRPYLRAHLVTHTKEPPRSCNYCNRAFIRQDCLLRHMRAKHRDKVERILVEAERKKLQLQLMSFAGRESALPTSAPPAELADALPASIADLLSILVDEDTLQSFGAPDAPVDDVLKMVIKRCGHSPVEDPLMEELDRLRENAKLLFTVVIDDAGVKALLNNQSVDEVIQHVLNLVKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -