Basic Information

Insect: Mesopsocus fuscifrons
Gene Symbol: -
Assembly: GCA_950004255.1
Location: OX465374.1:3028617-3039367[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.024 1.5 9.4 0.2 2 23 212 234 211 234 0.95

2 20 0.00038 0.025 15.1 5.4 1 23 241 263 241 263 0.97

3 20 1.4 90 3.9 0.0 2 19 270 286 269 289 0.88

4 20 0.00019 0.012 16.1 0.5 2 23 297 319 296 319 0.96

5 20 0.0064 0.41 11.2 0.7 2 23 326 347 325 347 0.93

6 20 2.1e-07 1.4e-05 25.3 0.8 1 23 353 375 353 375 0.99

7 20 0.51 33 5.3 0.1 1 23 435 458 435 458 0.95

8 20 0.005 0.32 11.6 1.2 1 23 465 489 465 489 0.97

9 20 0.12 7.6 7.2 0.1 3 21 494 511 493 512 0.87

10 20 0.00022 0.014 15.8 1.2 1 23 519 541 519 541 0.99

11 20 0.075 4.8 7.9 0.4 3 21 561 578 560 579 0.81

12 20 0.00032 0.02 15.3 0.4 1 23 586 609 586 609 0.98

13 20 0.00019 0.012 16.0 1.1 1 23 615 637 615 637 0.98

14 20 2e-05 0.0013 19.1 0.8 1 23 643 665 643 665 0.99

15 20 0.13 8.2 7.1 0.1 1 13 671 683 671 685 0.91

16 20 0.0051 0.32 11.6 0.5 2 23 802 824 801 824 0.93

17 20 0.0028 0.18 12.4 6.2 1 23 885 908 885 908 0.97

18 20 0.0025 0.16 12.5 0.1 3 19 916 932 915 936 0.93

19 20 2.3e-06 0.00015 22.1 3.1 1 23 942 964 942 964 0.99

20 20 0.00053 0.034 14.7 2.6 1 23 970 993 970 993 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.024	1.5	9.4	0.2	2	23	212	234	211	234	0.95
2	20	0.00038	0.025	15.1	5.4	1	23	241	263	241	263	0.97
3	20	1.4	90	3.9	0.0	2	19	270	286	269	289	0.88
4	20	0.00019	0.012	16.1	0.5	2	23	297	319	296	319	0.96
5	20	0.0064	0.41	11.2	0.7	2	23	326	347	325	347	0.93
6	20	2.1e-07	1.4e-05	25.3	0.8	1	23	353	375	353	375	0.99
7	20	0.51	33	5.3	0.1	1	23	435	458	435	458	0.95
8	20	0.005	0.32	11.6	1.2	1	23	465	489	465	489	0.97
9	20	0.12	7.6	7.2	0.1	3	21	494	511	493	512	0.87
10	20	0.00022	0.014	15.8	1.2	1	23	519	541	519	541	0.99
11	20	0.075	4.8	7.9	0.4	3	21	561	578	560	579	0.81
12	20	0.00032	0.02	15.3	0.4	1	23	586	609	586	609	0.98
13	20	0.00019	0.012	16.0	1.1	1	23	615	637	615	637	0.98
14	20	2e-05	0.0013	19.1	0.8	1	23	643	665	643	665	0.99
15	20	0.13	8.2	7.1	0.1	1	13	671	683	671	685	0.91
16	20	0.0051	0.32	11.6	0.5	2	23	802	824	801	824	0.93
17	20	0.0028	0.18	12.4	6.2	1	23	885	908	885	908	0.97
18	20	0.0025	0.16	12.5	0.1	3	19	916	932	915	936	0.93
19	20	2.3e-06	0.00015	22.1	3.1	1	23	942	964	942	964	0.99
20	20	0.00053	0.034	14.7	2.6	1	23	970	993	970	993	0.95

Sequence Information

Coding Sequence: ATGTGCAAGGTTAAGGTTGCTGATGATAAAGAGTCCTTCGAGTCAGAAGTAAGGAAGGCTGCGAGCTCGCCTGCCCTTCGTGACCTCAGCACACAAGAAGATaatttggccagaatcacACCAGAAAGCCGGGGTTTTCCCCGGCTGGTGATGGCCAAGTACCAGTCAGGGCTGATAGGCCCTGAGCCGGGcaaaattaccaaaataaatctGGACAAGTCGGGAATAGATCTGGGGTCAtcttgcttcatagcccaGTGCCGAGGGACTGCTGAAGTCGTCGCAATGGAGGTTAAGCGGGAACTGCCCGCCGAAGACTTTTACCAAATGATCAAGCGAGAGATGGATACGACGGATGCGGCTTCGGCCCAGCAGTCCGCGCCGACTGCCGCCACCTCTGCCGATGATGGACAGGACACCAATGCCACgAACTATGTCGATGTCGCCATCGTGAAGTGCGAACCGGCGGATTTACACGTGGAAATCTCATCAGATGGCGACGACAGTGATGACGACAGTGATGATAGTGAGTGGGAGCCTGGTGGAGCCAATAGATCAAACAAGGCAAAACATCATGACACTTCAGGGGTGTCCAAAGAcgaggaaaagaaaagaataagAACTAAAAGCCAAGTTTGTCGTATCTGCAATGAGAAAGTTGACGGGCAGAAAGCGCTGAGGGAACATATGAAACAGGAACACTGTGATGGCGCTGGTCGCTACGTCTGCCATATTTGTTCCCGCGCTTACTCCTATAGACCTCACCTTCTGCGTCACATGTCACACCACGGCGCCGTCCCCGACGTCGTTTGCGAGACATGCGGGAAACTTTTCCTAAAAGATTACGTCAAGCGCCATGCCGCCATTTGCAAAGTCGAGAGAACGTTAAAGTGTCCTTCGTGTGATAGGAAATTTGGGTATAGGAAAGCTCTGAAGGACCATATTAATCGGGTGCACAGTGATATGAGACCTTTTCTATGTGGTGCCTGTGGGAAAAGGTTCAAAGTTGAGTGTGCCTTAAGGCAGCACGCCATCACGCACACGGCAGAGCAGCCGTTCAAATGCCCTGACTGTGATCGCTCGTTCAATAAGCGGTGGAACCTGGCTCAGCATAGGCGGATACACACGGGGGCACTGCCCTACGAGTGCTCGAATCTGGATCTACGTACTGAGCCAACGCCATTCGACGCAGACTGGACAGTCAAACTTGAACCGGAAGAATTTGACTCTACTGAAACTTCAGAAGATTGGTTGATTGCGGTAGATCCCGTGGACGTCGTGAATTGTGAAGAACGCAAGGCGTATGAATGTTTCGTTTGCCACGTCGAAGCAGCTGACGAGCAATTGCTTCGTGATCATTTGATGGAGCAGCATTGTAACCAAGAAGGGCGCTACCCTTGCACTCACTCTGACTGTTCCGAGTCGTTCGAGACGGTAGAACTGTTCTCCAAGCATTTGAGACTGCATTCAGGACGCCTGTGCCCAACGTGcggcaaaattttcaaattgcaGTGGATGAACTATCACATGCGGGAATGCGGTAACAGGACgaaatttaaatgtactgTGTGCAACGCTGAGTTAAAATCGGAGAGAACACTCCGTAAGCATATTAAAACTCACAGCAAAGACAGACCGTTAGGACACTTTTCCAAGCAATTGCTCCACTCTGCGCGGTTGTGCCCAACATGCGGCAAAACCTTCAAATTACGATGGATCAACCACCACTTGCGCGAGTGCGGGACCAATACTACATACAAATGCACAGTGTGCGACGCTGAATTGAAATCAGAAAGAACACTCCGTAGGCACATTAACATCACACACAGTGAGGAGAGGCCTTTTATTTGCGCAACTTGCGGGAAAGGTTTTAAGGAGATGGTCTCTTTAACGCATCATGAACGAACACATACGAGCGATCTCCCGTACAAATGTGCCGATTGTGGGCGTGGCTTCAATAAAAACTGGAACTATGTTCAGCACAAACGGATGCACACTGGTGTGATGCCGTATGAGTGCACAGTGTGCGGCGCTAAGTTCCGTCATAACGTGCTGGCCCCGGATAGAACGACACACACCAGAGACGATGAACTTCCATCGGAAAACTATACTGATGATTTTTGGGAGGATGACTCCTTCGATACATACCTCGCACCTGGGGACCCGGAGGACCAATCTAATGATTCGGATGAGGAATCTGATGATCTATTTATCACGTCAGATAATCCTGGGGATGAGCACGCCTACCATAGACCTCCAAAAGAAGAGAAGgcgaaaaatattaaaagtcCCGATTGCCCGGAAAAGTTTTCCAACACACGCATATTGGATGTTCATTTAAAAAGAAAGGAGGATGAGCACTTCAGCCGTAAACCTCcagcaaagaaaaaattggaaacaaTTCAGTGTTCCTACTGcccggaaaattttcccagtAAACGCAAATTGGATGCTCATTTCAGCAGTAGACATATCAATGCGGATGGGCGTTACGTTTGTTTAATGCCAGGCTGTTCAGCTATTAAAAAAACCTACAGGGAATTTGGAATGCACAAAGCTGACCACGAGGATTGTATGTGTGAGGCGTGTGGTCAACTGATTAAGCGGTCTCGGTTTGATCACCATTTGAATCTCTGTCGAAATGGCAAAACTTTTGAGTGCCATTTATGCCACCGCAAATATTCTTCTGATTTTAATTTGAAACAGCATGTGAAAAGACTTCATAACAATCAGAGACAATTGCTATGTGGAGTCTGCGGCAAAACCTTCAAAAATGATCCCGCGCTTAGGCGGCATGATATAATCCATACCGAGAACCAGCCGTTCAAATGCCCTGACTGTGGCCGCTGCTTCAATAGAGACTGGAACTACACACAGCATAGGCGGATACACACGGGCGTGCGGCCCTACGAGTGTTCGGTTTGCGGAGAGAAATTCCGTCACAACGTCACTATGAAACAGCATCGTGTGAAATACCACCCGTTGGAGGCAAACCCTGCtgaggaagaaaagaaagaaaacggagtcagcagtcagctacCTTAA
Protein Sequence: MCKVKVADDKESFESEVRKAASSPALRDLSTQEDNLARITPESRGFPRLVMAKYQSGLIGPEPGKITKINLDKSGIDLGSSCFIAQCRGTAEVVAMEVKRELPAEDFYQMIKREMDTTDAASAQQSAPTAATSADDGQDTNATNYVDVAIVKCEPADLHVEISSDGDDSDDDSDDSEWEPGGANRSNKAKHHDTSGVSKDEEKKRIRTKSQVCRICNEKVDGQKALREHMKQEHCDGAGRYVCHICSRAYSYRPHLLRHMSHHGAVPDVVCETCGKLFLKDYVKRHAAICKVERTLKCPSCDRKFGYRKALKDHINRVHSDMRPFLCGACGKRFKVECALRQHAITHTAEQPFKCPDCDRSFNKRWNLAQHRRIHTGALPYECSNLDLRTEPTPFDADWTVKLEPEEFDSTETSEDWLIAVDPVDVVNCEERKAYECFVCHVEAADEQLLRDHLMEQHCNQEGRYPCTHSDCSESFETVELFSKHLRLHSGRLCPTCGKIFKLQWMNYHMRECGNRTKFKCTVCNAELKSERTLRKHIKTHSKDRPLGHFSKQLLHSARLCPTCGKTFKLRWINHHLRECGTNTTYKCTVCDAELKSERTLRRHINITHSEERPFICATCGKGFKEMVSLTHHERTHTSDLPYKCADCGRGFNKNWNYVQHKRMHTGVMPYECTVCGAKFRHNVLAPDRTTHTRDDELPSENYTDDFWEDDSFDTYLAPGDPEDQSNDSDEESDDLFITSDNPGDEHAYHRPPKEEKAKNIKSPDCPEKFSNTRILDVHLKRKEDEHFSRKPPAKKKLETIQCSYCPENFPSKRKLDAHFSSRHINADGRYVCLMPGCSAIKKTYREFGMHKADHEDCMCEACGQLIKRSRFDHHLNLCRNGKTFECHLCHRKYSSDFNLKQHVKRLHNNQRQLLCGVCGKTFKNDPALRRHDIIHTENQPFKCPDCGRCFNRDWNYTQHRRIHTGVRPYECSVCGEKFRHNVTMKQHRVKYHPLEANPAEEEKKENGVSSQLP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -