Basic Information

Insect: Mesopsocus fuscifrons
Gene Symbol: -
Assembly: GCA_950004255.1
Location: OX465373.1:18583611-18588926[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.00098 0.063 13.8 0.9 3 23 334 354 333 355 0.95

2 20 0.0052 0.34 11.5 3.4 2 23 361 383 360 383 0.95

3 20 0.0026 0.16 12.5 0.4 2 23 390 411 389 411 0.96

4 20 2.8e-05 0.0018 18.7 2.5 1 23 417 439 417 440 0.96

5 20 5.4e-05 0.0035 17.8 1.6 1 23 447 469 447 469 0.98

6 20 0.00096 0.062 13.8 3.5 1 23 475 498 475 498 0.96

7 20 0.00014 0.0092 16.4 1.8 1 23 504 527 504 527 0.93

8 20 0.16 10 6.8 0.6 2 19 535 552 534 552 0.95

9 20 0.0004 0.026 15.0 0.5 2 23 670 691 669 691 0.97

10 20 2.5e-06 0.00016 22.0 0.4 1 23 697 719 697 719 0.99

11 20 0.0011 0.071 13.6 3.7 1 23 725 747 725 747 0.96

12 20 3.6e-06 0.00023 21.4 0.1 2 23 754 775 754 775 0.97

13 20 9e-05 0.0058 17.1 0.2 1 23 781 804 781 804 0.94

14 20 7.2e-05 0.0046 17.4 0.7 1 20 810 829 810 831 0.93

15 20 7.1e-07 4.6e-05 23.7 2.2 1 23 885 907 885 907 0.98

16 20 5.4e-07 3.5e-05 24.1 0.6 1 23 913 935 913 935 0.98

17 20 0.00015 0.0096 16.4 1.2 1 23 941 963 941 963 0.96

18 20 0.0052 0.33 11.5 3.6 3 23 971 991 970 992 0.96

19 20 0.013 0.85 10.2 4.2 1 23 996 1021 996 1021 0.95

20 20 0.0025 0.16 12.5 1.1 2 23 1028 1049 1027 1049 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.00098	0.063	13.8	0.9	3	23	334	354	333	355	0.95
2	20	0.0052	0.34	11.5	3.4	2	23	361	383	360	383	0.95
3	20	0.0026	0.16	12.5	0.4	2	23	390	411	389	411	0.96
4	20	2.8e-05	0.0018	18.7	2.5	1	23	417	439	417	440	0.96
5	20	5.4e-05	0.0035	17.8	1.6	1	23	447	469	447	469	0.98
6	20	0.00096	0.062	13.8	3.5	1	23	475	498	475	498	0.96
7	20	0.00014	0.0092	16.4	1.8	1	23	504	527	504	527	0.93
8	20	0.16	10	6.8	0.6	2	19	535	552	534	552	0.95
9	20	0.0004	0.026	15.0	0.5	2	23	670	691	669	691	0.97
10	20	2.5e-06	0.00016	22.0	0.4	1	23	697	719	697	719	0.99
11	20	0.0011	0.071	13.6	3.7	1	23	725	747	725	747	0.96
12	20	3.6e-06	0.00023	21.4	0.1	2	23	754	775	754	775	0.97
13	20	9e-05	0.0058	17.1	0.2	1	23	781	804	781	804	0.94
14	20	7.2e-05	0.0046	17.4	0.7	1	20	810	829	810	831	0.93
15	20	7.1e-07	4.6e-05	23.7	2.2	1	23	885	907	885	907	0.98
16	20	5.4e-07	3.5e-05	24.1	0.6	1	23	913	935	913	935	0.98
17	20	0.00015	0.0096	16.4	1.2	1	23	941	963	941	963	0.96
18	20	0.0052	0.33	11.5	3.6	3	23	971	991	970	992	0.96
19	20	0.013	0.85	10.2	4.2	1	23	996	1021	996	1021	0.95
20	20	0.0025	0.16	12.5	1.1	2	23	1028	1049	1027	1049	0.96

Sequence Information

Coding Sequence: ATGGATCGTGAAGTAGCTGTCGACTTTAACAAGATCTGCCGGTTATGCATGTGTGAGGAACCGAAAATGACTTCGATCTTTATTGAACAATCTGGTGCTGTGCCACTACCTCTCAGAATAATGGCTTGTGTATCAATAGAGATAACTGCTGCTGATCCACTACCCAGTCAGATCTGCAATACGTGTTTATGTCAAGTGGACAACTGGTACAAATTTAAAGATCTTTGTGAAAACGCCGATGCTGCGTTGAGACGATTAGCTTCCAGTGATGCAATGAATTATGATGTTATAACGCAGATCCAAGAAACAGGGCGGTGTCTAAAGAAAAAGTTCCAGTCATTGCAAGACTTCTCAGATAGGACAGGGATGGCAGAAGCAGAAAACACTACGGACGGTGGAGAGCAAAAAACGAAGTCAGGTGATTGTAGACAGGAAGAGAATTTCAAGACTTGGAGAAATATGGGCACGCAGGTGGTCGTAGTTGATGTGGATATCAAAACCGAACTGAACCAGAACTCGGGTGACTATAAACAGGAAGAGAGTTACATGACGATGAGGAGTACGGGTACACAGATGGGCGATGTCAAGCCCGAACCACTCCACGCTCTAAATCTCCAGTACAATTCGTGGCCCGCCCCTGGTGATTCTTCAGAAGCCAGTGAGGCTAGCGAGAGTGACTCAGGTGCTGAAAATCATCCCGCACCTGACGGCTACTCTTCTGATGACTCCCTCACCCTCCTCGCTCACAAGGAAAAactcctgaaagaaaaacagaCCCGTAAAAGAGTGAGGAGAAAAAAGGAGCCGGGTGAGAGTGGTGACGGGGTGCGTGTGTCTCGAACCATGCAGACTCAGACCGGAGATGATGGCGCCGACAGtgctttggaaatctctattgAAGAAGTAGCAGAAGAAGGCAAGAAAAAGAGACGAAATAAACGAACACAAACTGGGGGAGCAAAGAAGCGGTTTCGGATCCGGCCTGCAGTGCCGAGTGCGTGCACGCTATGCGACAAGGTCTACAAGAACGCGGAGATTTTGCGCCAGCACATCAAGTCGCACCACGTCAGCGGCAACATTGAGTGCCAGCACTGTCAGACCAAGTTTTCCTCCCTACGCAGCCTCAAATACCATGAGCAGAGGAACCACAGCAATCTCGAGCCCGTACCCTGCTCCTTTTGTGGCAAAAAGTTCTTGGATAAAAAATACTTGCGAATTCATGAAAACATTCACAGCCAAACGAATCAGTACGTGTGCCAATTTTGTGGTCGGAAGTTCATCATGAAGACGAATCTGACGGTGCACATTAGTCGCCATCATACCCAAAAGACTAACGACTTCATCTGCCAGGTTTGCGGCAAAGCCTTCCCCTTCAAGCTATACCTAAAGAAACATTTTAAGACTCACACTGACTACAAGCCTCACAGTTGCTCTCACTGCGAGGCGCGGTTCCGCGAGAGCACGCTTCTTCGTAAACATATTAACAGCATCCATCTGAAGCTCCGCCCTTTCCTCTGCCAGTACTGCCAAAAGACGTTCACCCGGAGCCTCTACTTACGGGAGCACTTGGAATCGCAGCATTTGGGAATCCCAAAGAAGATGGAGTGCATGCGGTGCGGTGAAAATTTCCATAACCGTAGCCGCCTCCGGCAACATGACTGCGAGGGGCGCCTGGAGACCGTCGAGAAGCATTCCGCATGTGAGACTGAGAGTGATTTTGTCCACTCAGTGCTCCTAGTGACACTTCACGAAGAGCCCTCTCATCTTCAACACTCCACTATCTCTCCTACTCTAGTTACCATTCCTCTAAAACCAAGTGATGTAGAAGAGAATGCTGAAAATTTGGCGGAGCAGTCAGCGCTTCTCCTACGTTCTCCAGTCCACGATCCAAACCCTTTTTTGACACCGAGTAAGCGATACTGGTGTGAGGAGTGCGGGACTGAgctacactctaaagtggcgcTGCGTTGTCACCGCGCCCTCGTTCACAAAATCGACGTCAAGTGGTCCTGTGAGCAGTGCGGCAAGGGCTTCTATTACCGGTCCCGGTACCTTAATCATGTTCGGGTCCACGGCTCTGACAGACCGTACCCATGTTCGGTGTGTGACAAAACGTTCGGCAATACGTCTAATAGAATCGTTCACATGAGGACCCACACCGGAGATAAACAGCATTGTTGCACCTCGTGCGGCTACGCGTCCGCCACGCGCAGCAACCTACTTAAGCATTTGCGGCTCCATGCCGGTCAGAAATCCGCCGTTTGCTATATATGCGGTAAGGGGTTTGCTACTCCCGAATACCTGTCACGTCACCTAAACACCCACAAGAACAAACGCGACTTTACCTGCGGGCAGTGTGACGCTGCCTTTAAGAGCTCCAAAAGCCTCAAAAGTCACATCAGCGCTGTCCACCTCAGAGCACGGCCATACAACTGCCCGACTTGTAAGAAGGGTTTTAGTCGAAAATCAAACATGATTGAACATAAAACCACTGGCCCTGCCGCCCACGAATTCGACAGCACCATGCTGTTTGTTAGCGTTCATGAGCAGCGAGAAGAGCGATTCATTTCAGAATTGTACAGACGGCGTCCAAGACAAAAAACTAGTAAAAGAGAAAATACCGCCCCCAAAGCAGAAAAGGCTGAAAAGCGGTACCAGTGTGAGCAGTGCGGTAAAGAGTTTAAGCAAAAGTGTAACTTGGAGAGGCACGCGATGGTGCATACTAAAGCTCGCCCCTTCACCTGCCCAAAGTGCCCCAGAACCTACCCCGACAAGTCTTACCTCAAGGACCATCTCAGGATTCATGCTGGAGATAAGCGGTTCTTTTGTACGTTATGTGGTTGGGGAACCGTTAGAAAATGCAATCTGAACAGGCACATGATTGGTCATGAGGCAGCCCGCAACGTACTGTGCCCGGTTTGCGGCAAAGCATACAAATGTCGCGACTCGCTAAAGCGACACTCCAAGATTCATCATGATGAGCGACATATTTGTCATCTATGCGACACGGCCACCGTGTATAAGTCGCGGAAATCACTGCGACGGCACCAGCGGGTCCGCCATCCTGGCTTTACTCCGCTGTCGTGCTACATCTGCCGCAAGTCTTTTGATTTCAACAACACCTATGCTGAGCATATGACCACGCATCAGCAGCCGAGTCAGCACCATCACCAGTGA
Protein Sequence: MDREVAVDFNKICRLCMCEEPKMTSIFIEQSGAVPLPLRIMACVSIEITAADPLPSQICNTCLCQVDNWYKFKDLCENADAALRRLASSDAMNYDVITQIQETGRCLKKKFQSLQDFSDRTGMAEAENTTDGGEQKTKSGDCRQEENFKTWRNMGTQVVVVDVDIKTELNQNSGDYKQEESYMTMRSTGTQMGDVKPEPLHALNLQYNSWPAPGDSSEASEASESDSGAENHPAPDGYSSDDSLTLLAHKEKLLKEKQTRKRVRRKKEPGESGDGVRVSRTMQTQTGDDGADSALEISIEEVAEEGKKKRRNKRTQTGGAKKRFRIRPAVPSACTLCDKVYKNAEILRQHIKSHHVSGNIECQHCQTKFSSLRSLKYHEQRNHSNLEPVPCSFCGKKFLDKKYLRIHENIHSQTNQYVCQFCGRKFIMKTNLTVHISRHHTQKTNDFICQVCGKAFPFKLYLKKHFKTHTDYKPHSCSHCEARFRESTLLRKHINSIHLKLRPFLCQYCQKTFTRSLYLREHLESQHLGIPKKMECMRCGENFHNRSRLRQHDCEGRLETVEKHSACETESDFVHSVLLVTLHEEPSHLQHSTISPTLVTIPLKPSDVEENAENLAEQSALLLRSPVHDPNPFLTPSKRYWCEECGTELHSKVALRCHRALVHKIDVKWSCEQCGKGFYYRSRYLNHVRVHGSDRPYPCSVCDKTFGNTSNRIVHMRTHTGDKQHCCTSCGYASATRSNLLKHLRLHAGQKSAVCYICGKGFATPEYLSRHLNTHKNKRDFTCGQCDAAFKSSKSLKSHISAVHLRARPYNCPTCKKGFSRKSNMIEHKTTGPAAHEFDSTMLFVSVHEQREERFISELYRRRPRQKTSKRENTAPKAEKAEKRYQCEQCGKEFKQKCNLERHAMVHTKARPFTCPKCPRTYPDKSYLKDHLRIHAGDKRFFCTLCGWGTVRKCNLNRHMIGHEAARNVLCPVCGKAYKCRDSLKRHSKIHHDERHICHLCDTATVYKSRKSLRRHQRVRHPGFTPLSCYICRKSFDFNNTYAEHMTTHQQPSQHHHQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -