Basic Information

Insect: Mesopsocus fuscifrons
Gene Symbol: -
Assembly: GCA_950004255.1
Location: OX465380.1:15082898-15091853[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 8.8e-06 0.00056 20.2 3.4 1 23 230 252 230 252 0.97

2 16 4.4e-05 0.0028 18.0 3.6 1 23 258 280 258 281 0.95

3 16 5.4e-05 0.0034 17.8 4.8 1 23 287 309 287 309 0.98

4 16 3.5e-07 2.3e-05 24.6 3.0 1 23 315 337 315 337 0.99

5 16 6e-06 0.00038 20.8 1.5 1 23 343 365 343 365 0.97

6 16 8.9e-05 0.0057 17.1 4.1 3 23 373 393 371 393 0.98

7 16 0.0052 0.33 11.5 2.8 1 23 399 421 399 421 0.96

8 16 0.00064 0.041 14.4 7.1 1 23 428 450 428 450 0.97

9 16 1.9e-05 0.0012 19.2 4.2 1 23 456 478 456 478 0.98

10 16 2e-05 0.0013 19.1 4.3 1 23 484 506 484 506 0.98

11 16 1.1e-06 6.9e-05 23.1 1.5 1 23 512 534 512 534 0.98

12 16 2e-06 0.00013 22.3 2.1 1 23 541 563 541 563 0.99

13 16 2.5e-06 0.00016 21.9 3.7 1 23 570 592 570 592 0.99

14 16 1.2e-06 7.7e-05 23.0 3.9 1 23 598 620 598 620 0.98

15 16 6.2e-06 0.0004 20.7 1.7 1 20 627 646 627 648 0.94

16 16 0.014 0.89 10.2 0.2 1 12 741 752 741 757 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	8.8e-06	0.00056	20.2	3.4	1	23	230	252	230	252	0.97
2	16	4.4e-05	0.0028	18.0	3.6	1	23	258	280	258	281	0.95
3	16	5.4e-05	0.0034	17.8	4.8	1	23	287	309	287	309	0.98
4	16	3.5e-07	2.3e-05	24.6	3.0	1	23	315	337	315	337	0.99
5	16	6e-06	0.00038	20.8	1.5	1	23	343	365	343	365	0.97
6	16	8.9e-05	0.0057	17.1	4.1	3	23	373	393	371	393	0.98
7	16	0.0052	0.33	11.5	2.8	1	23	399	421	399	421	0.96
8	16	0.00064	0.041	14.4	7.1	1	23	428	450	428	450	0.97
9	16	1.9e-05	0.0012	19.2	4.2	1	23	456	478	456	478	0.98
10	16	2e-05	0.0013	19.1	4.3	1	23	484	506	484	506	0.98
11	16	1.1e-06	6.9e-05	23.1	1.5	1	23	512	534	512	534	0.98
12	16	2e-06	0.00013	22.3	2.1	1	23	541	563	541	563	0.99
13	16	2.5e-06	0.00016	21.9	3.7	1	23	570	592	570	592	0.99
14	16	1.2e-06	7.7e-05	23.0	3.9	1	23	598	620	598	620	0.98
15	16	6.2e-06	0.0004	20.7	1.7	1	20	627	646	627	648	0.94
16	16	0.014	0.89	10.2	0.2	1	12	741	752	741	757	0.89

Sequence Information

Coding Sequence: atgacgtcacttccaGACTTCAACATCTCCATAGAGCCACGGGACACGTGTTCAGAGTCAGGCAACACTATGACGTCGCTTCCAGACTTCAACATCTCCATAGAGCCACGGGACACATGCTCAGAGTCAGGCAACactatgacgtcacttccaGACTTCAACATCTCCATAGAGCCACGGGACACGTGTTCAGAGTCAGGCAACactatgacgtcacttccaGACTTCAACATCTCCATAGAGCCACGGGACACGTGTTCAGAGTCAGGCAACactatgacgtcacttccaGACTTCAACATCTCCATAGAGCCACGGGACACGTGTTCAGAGTCAGGCAACactatgacgtcacttccaGACTTCAACATCTCCATAGAGCCATGGGACACATGCTCAGAGTCAGGCTACactatgacgtcacttccaGACTTCAACATCTCCATAGAGCCACGGGACACATGCTCAGAGTCAGGCTACactatgacgtcacttccaGACTTCAACATCTCCATAGAGCCACGGGACACATGCTCAGAGTCAGGCAACactatgacgtcacttccaGACTTCATCTCCATAGAGCCACGGGACACATGCTCATCAGAGTCAGTCAACCCTACTACGTCACTTCCGGACATCAACATCTCCGTACAACCACGTGGAGTACGTACCAACGACCGGTCATTTCCATGTGATCAGTGTGGGCGGAGGTTTGTTAGGAAACAGAACCTTCATCGACATTTTAAGATTCATTCTGTCAAGAAACCTTTCGAATGTCACCACTGCGGGCGGCGATATGGGAGAAAAGACGACCTTAGCGCACATGTCATGGCTCATCATACGGGTCAAAAGCCATTTAAGTGTCGACACTGCGGGCGGAGGTTCAGGTTCAAAGATAAGCTTCTCCGTCATGAGATGATTCATACTGGTGAGAAACCTTTCGAATGTCACCAGTGCGGGCGGCGATTTGCGAGAAAAGAGCAACTTGCACAACATAGGAGGACTCATACCGGTGAGAAACCATTCAATTGTCACTATTGCGGGCGGAGGTTTGGGAGGAATGAAAACCTTTCCCTACATCTGATAGTTCATACTGGTGACAAACCTTTCGGATGTCACCAGTGTGGGCGGCGATTTGCGAGAAAAGGGTACCTTGCCCACCATAAGATGACTCATTCTGATGACAAACCTTTCGAATGTCACCACTGTTGGCGGCGATTTGAGGCAAAACACGACCTTATTGGGCATGTCATGGCTCATATGGGTCAGAAGTCACCATTTAAGTGTCACCATTGCGGGCGGAGGTTTGGGAGCACACAAAAACTTCGCCGTCATAAGGGGACTCATACTGGTGACAAACCTTTCGAATGTCACCACTGCGGGCGGCGATTTGGGAGAAAAGATAAACTTGTCCTACATGGAAGGACTCATACTAGTGAACAGCCTTTCGAATGTCACCAGTGTGGGCGGCAATTTGCGAGAAAAGGGTACCTTGCCCACCATAAGATGACTCATTCTGATGACAAACCTTTCGAATGTCACCAGTGTGGGCGGCGATTTGCGAGAAAAGGGTACCTTGCCAACCAtgtgatgactcatacagatGACGACAAACCTTTCAAATGTCACCAGTGTGGGCGGCAATTTGCGAGAAAAGGGTACCTTGCCAATCAtgtgatgactcatacagatGACGACCAACCTTTCAAATGTCACCAGTGTGGGCGGCGATTTGCGAGAAAAGGGTACCTTGCCCTCCATAAGAGGACTCATTCTGATGACAAACCTTTCGAATGTCACCACTGCGGGCGGCGATTTGGGAGAAAAGATAAACTTGCCGaacatatgatgactcatacagatGACGACAAACCTTTCAAATGTCACCAGTGTGGGCGGCGATTTACGAGAAAAGGGTACCTTGCCAAACATGAGATGAATAAGTGCTCCAGTGTGGGCGgtgatttacaaaaaaaagATGACGGAGCCGGCAATGCATTGGAATCAAAACAACAGGACAAAGAGGAATTGTTTAGCATTCCTAATGTAGCGATCAAGGAGGAGCTAAACATCGACTGGGTGAAGATGGAGTTCGAAAATCCATGTGTGAAGCAGAAGCGGTCAGCGAGAAAAGTAAAGAGAAAGAAGTCATTACCGAAAAAATCTCGAATCAACGTCTCCACACCGTCTCAGGGAACATCTGCTAATGCAAAACCGTTCGTCTGTCACCACTGTGGGCGGAGGTTCGCCAACATTGTTTTCCTGGTGCAGGATGTGACCAAACCGTCTGTCCCGACCCTCGAGCAAACGCGGTCACAGTTACCTCAGTTTACCTCGCTGTATTACCTCAGTCGCAGTTGTCAGTTTACCCAGTTAATTATACCCAGTTTATGCGCGTGGTGTTCCAAACTCTCTACAGCTGCCGCCTACGTCGTCCTCAGCGGGCCCCGCTAG
Protein Sequence: MTSLPDFNISIEPRDTCSESGNTMTSLPDFNISIEPRDTCSESGNTMTSLPDFNISIEPRDTCSESGNTMTSLPDFNISIEPRDTCSESGNTMTSLPDFNISIEPRDTCSESGNTMTSLPDFNISIEPWDTCSESGYTMTSLPDFNISIEPRDTCSESGYTMTSLPDFNISIEPRDTCSESGNTMTSLPDFISIEPRDTCSSESVNPTTSLPDINISVQPRGVRTNDRSFPCDQCGRRFVRKQNLHRHFKIHSVKKPFECHHCGRRYGRKDDLSAHVMAHHTGQKPFKCRHCGRRFRFKDKLLRHEMIHTGEKPFECHQCGRRFARKEQLAQHRRTHTGEKPFNCHYCGRRFGRNENLSLHLIVHTGDKPFGCHQCGRRFARKGYLAHHKMTHSDDKPFECHHCWRRFEAKHDLIGHVMAHMGQKSPFKCHHCGRRFGSTQKLRRHKGTHTGDKPFECHHCGRRFGRKDKLVLHGRTHTSEQPFECHQCGRQFARKGYLAHHKMTHSDDKPFECHQCGRRFARKGYLANHVMTHTDDDKPFKCHQCGRQFARKGYLANHVMTHTDDDQPFKCHQCGRRFARKGYLALHKRTHSDDKPFECHHCGRRFGRKDKLAEHMMTHTDDDKPFKCHQCGRRFTRKGYLAKHEMNKCSSVGGDLQKKDDGAGNALESKQQDKEELFSIPNVAIKEELNIDWVKMEFENPCVKQKRSARKVKRKKSLPKKSRINVSTPSQGTSANAKPFVCHHCGRRFANIVFLVQDVTKPSVPTLEQTRSQLPQFTSLYYLSRSCQFTQLIIPSLCAWCSKLSTAAAYVVLSGPR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -