Mfus015723.1


Basic Information
Transcription Factor Domain
Sequence Information
Similar Transcription Factors

Basic Information

Insect
Mesopsocus fuscifrons
Gene Symbol
ZNF236_1
Assembly
GCA_950004255.1
Location
OX465380.1:15559076-15567812[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.098 6.3 7.5 1.4 1 23 150 172 150 172 0.98
2 25 0.08 5.1 7.8 0.8 3 23 180 201 178 201 0.85
3 25 0.0004 0.026 15.0 0.7 2 23 206 227 205 227 0.93
4 25 0.0091 0.59 10.7 0.0 2 23 234 256 233 256 0.95
5 25 0.0016 0.1 13.1 2.4 1 23 278 300 278 300 0.97
6 25 1.7e-07 1.1e-05 25.6 0.7 2 23 328 349 327 349 0.97
7 25 3.7e-06 0.00024 21.4 0.8 1 23 355 377 355 377 0.98
8 25 7.6e-06 0.00049 20.4 0.3 1 23 383 406 383 406 0.96
9 25 0.46 30 5.4 5.1 1 23 416 439 416 439 0.93
10 25 2.1e-05 0.0013 19.1 5.5 3 23 556 576 554 576 0.98
11 25 5.3e-05 0.0034 17.8 0.6 1 23 582 604 582 604 0.99
12 25 0.029 1.8 9.2 4.1 1 23 610 632 610 632 0.98
13 25 0.0074 0.47 11.0 0.3 1 23 638 662 638 662 0.90
14 25 0.0004 0.026 15.0 4.4 1 23 707 729 707 729 0.98
15 25 0.00011 0.0068 16.8 4.0 1 23 735 757 735 757 0.99
16 25 0.0041 0.26 11.8 2.9 1 23 763 786 763 786 0.93
17 25 0.02 1.3 9.7 6.4 1 23 792 815 792 815 0.95
18 25 0.021 1.3 9.6 0.2 2 23 1030 1051 1029 1051 0.95
19 25 6.8e-07 4.3e-05 23.7 0.8 2 23 1118 1139 1117 1139 0.98
20 25 0.00089 0.057 13.9 3.5 1 23 1145 1167 1145 1167 0.99
21 25 1.6e-05 0.001 19.4 0.6 2 23 1174 1195 1173 1195 0.97
22 25 2.9e-05 0.0018 18.6 0.8 1 23 1201 1223 1201 1223 0.97
23 25 3.7e-07 2.4e-05 24.6 0.9 1 23 1327 1349 1327 1349 0.98
24 25 0.00021 0.014 15.9 1.7 1 23 1355 1378 1355 1378 0.95
25 25 0.00065 0.042 14.4 0.4 1 23 1387 1410 1387 1410 0.95

Sequence Information

Coding Sequence
ATGTTCGAGTGGACTCAGGCGGATGGGCAGTACATACAAGTTCCAGGCTTCGTCTCGCCGCAAGGAAGCGTCTCCATCTTCCTCCCACCGGAGTTTATGGACGTAAACGTCGAAAAGCAAGACGAACTTCTAAACATTCCAATGGGCGGTGACATGCAGGACGTCGAGTTTGAGTTCGATTCCCCGCCGGTTGCCATTTTAGAAGACAATACCCTCCTTGCCATCGAACATTTTCAAAGAATGGACGATGAAGAGTCCCAGTCTGGGTTAATTTACCAGAACCAAGTTATCGAAGAGGTCGAAGACGATGAAATGTTAACGAATTATTCGAAAACGTTAAAGTTGGACTCGGTTGACGAAGAGAAGGATGAACAAGACAAAACCGttcctgtaaaaaaaagtggaaGGCCCAAAAAAAACCCGCTTCCGCCAAATGGGTTGGGTCCTTTTCGGTGTGAGCGGTGCGATGACGAGTTCAAAAACTACGTGGATTATCTCacacataaaaaaattcattttgcccagaaaaaaattccctgtATTCATTGCAATGAAAGtttcaacaaagaaaaaaatttaaagctCCATGAAGCACTTCGGCACACTCACAATCTCATCTGTCCGGAGTGCCAAAAATGTTTCGCCCGTTTTGCCGCTTTTAAAGCTCATTTGGCGTTTCACGAAGAGGACGACACTATCCCTTGCCCCGTCTGTGGCGAAGAGTTTGAGCTAAACTTAATGCTGGAGCAGCACATTCTAAAACTCCACAAACCTAAAGAACAAGCTAAATCCTTCAATCCTACTTTTCGGGTCACCAGTACGCTGTCTCGGTTTTCCTGCTCGACTTGTAGCCGGCCATTTACAAACTACCTCAGTCTCAAAAACCACCGAAAAGAACACGACAGGTTCAAGGTGGAGTTCGATGTTTTTGGTCGGCCAAAACGGAAAAAACGAGCTGCGAAAAAAATTGGTCGGTTGCTCCCTTGTACCCAGTGTGAGAAGAAGTTCGATAGGCCGAGTCAGTTGCAGAGACACATGCGGGTGCACACGGGAGAGAAACCGTTTGTTTGTCACGTTTGCGACACTGCTTTTAACCAGAAGGGGACTCTGACTGTTCATATGGCGAAGCACAATGGGAGCAAGCCGTTTGAGTGTCCCTATTGTGGAAACAAATTCACACAGCGAGGAAATCTGATCTCTCACGTCTCTAAAGCTCATCAAtTCATTGAAAGAGGGAAAGATCGTTTCGACTGCCCAGACTGCCCTTGCAGCTTCGCCAAACAACAAGCTCTTCACTGTCACATCACCAGATTCCATGAAATCAGAAAGAAGGAAGCGCAGGAGCAGCAAGCCAAAGAACAGCAAAACGAGGAAATGATTCAGGAGGCTGATACTGTTGTCGATATGGACATACTACAGAAGGCGTTACGGGAAAGTGGTCTTCGTGCAGAAGAAATTCCTTCATTCGACATAGGATTGGTGGACCAGCAGCCGCCGTCATCACCGCTACCAGAGGAAGAAGCAGAACAAGAAGCAGAGgacgaagaacaagaacaagaagtagtcGAGACGCCTGTGTTGAACTTGAAAGAAGTCAAAAGTGATGGCAGCGCCGTCTGGCATACTGTCGCTGTACACTACGATGGAACGGGTCGGTGGTACGGTTGCCATACGTGCAAGAAACATTTCAAGAAACCGTCCGATTTGCTTCGTCACATCCGAACTCATACTCAAGAGAAACCGTACCGGTGCAACGTGTGCTACCGAGCGTTCGCTATGAAACCCACCCTCATATCTCATCAACGGACCCACACAGTCCGTCCCACATACGACTGCCACGTATGTAGCAAACAGCTGAGTTGTAAATCTGCTCTCCAGCGCCATCTCGAAACTCACGAAACTTCCGGAAACTTTCCCTGCTCGCCGTGTGAGTTGGCCTTCAGGTCAGCTAGTCAGTTAAAAGAACATCAGACAACGCAGAAACATAAAGCCACCTCGCAAGCAAGTCTCCCGCCGCCATATGTCCGGATGGAAAAAAATGGAGgattcaaaattgaaatttcacgGAAGGAgcggtttttggaaaatagtcAATCGGCGAGTTTTGAAGAGCGACCGCACAAGTGTGAGATATGCCTAGTGCGCTTTCGTAAAAGCAGCCACCTGAAGCAGCACTTGATGATTCATACTGGAGCGCGGCCGTTCAAGTGCAACGTCtgtgaaaaatcattctgcaaGTACGGAGTCCTGAAAACTCACATCAAGACTCACCTTGGTCTCAAACCATTCACATGCAAGGTGTGCCAAGCCACATTTTCAATGCGGGGAAGCCTGAATCGTCACTGCCAAACCCTGCATAGTGATGAGAGACCGTACCTGTGTCCTGTCTGCGAAAGAACattcaAAACTTCCCAGCagtgcaaaaaacacatgcacAGGACTCATATAAAAAACACTGAGAAGGTTTCGTATTCAAAAGAACCCGaggaaaaaacaaatgaagaaGTGGAAGAAGACGAACAAGAGATGGTGGAGGCTTTGCCCAGCGCTGTGGATATTGGGGCTGAGGATGTCAATCAGAGCTTTTTTGCGGATGAAACCGGAACTATCACGCTCCCGCCACTTTCAAAAGAGAGTATTCAGGAGTTGGAGCAAACGTTAAATCAGCAGTTCTTCTCTACAGTAGTAACCACCGTCGACCCTATAGCTAACGAAGTCTATCTTGAAAGCCCTAAGGAGTTACTGTTGGGTGTGAACATGGAGGTAAGTACCAAACTGACGGCGCTACAGTCCTTGCCTCTATTGCCTTTAAAATTTTGCGCAGAAACTTTAAGATCATTCTGGGCTGATGCTACTGAGCCTCCGGCCTATGACCGcGTGGGAGACTCCGTAACCGATGAAGATTACGGTGCTGCCGATGGCCTGACCACGGTAACTGACATGTTTCAAATTCTGCCGGACGGTACGGGGAACCTTTGCGGGTATCCCGTCCTCGCAGATGTCGAGTCCCGGCAAGTCACACCCGtagagggccctgaaaaaaagaTGGCCGACGTCGGATCGGAGCGAAAGACAGTCAGAGTTCTAACGTGCGACCAGTGCGGATGGAAAACCCAGTCTGAGCGAGCTCTCATGCGCCATTTAACTGAACATtatcagAATGTCCGCCCTCGCATAAAGAGGACCAAAGCGCCAGTGAAGGAATTCACGGCTGAAGAGACGGCCGAGCTCGCTACCAAGTACCTGAGTGCATGTGCCAGTGAGAGTGAGAAGATTCTCgtggctgctgctgctgaaaaaattggaaggGTGTCGGATCGTCGaggtaaaaagaagaaaagaccGAGCGTTCGATGTGAAAAGTGTGACCGAGGCTTTACGCGAAACTCGGACTTGATTCGTCACGAGCGCACGCACACGGGGGAGCGGCCGTACCAGTGCGAGCTGTGTGAACGCCGCTTTACGGTCAAATCCACTCTCGTGTGCCATATGAAGACGCACAGTACCAGGCCTATTCTCACCTGCCATGTGTGTGGCGCTGAGTTCTCTGCACGCAGCTCTCTAAAGGTCCACATGCGGCTCCACACAGGCGCCCGCCCGTTTCCCTGTCCTCTCTGCCTCGAACGTTTCCGAACGTCCGGCCATCTAAAAAACCACATAGAGTCTCACACCAGCAACAAGCCAATTCGGCCGTGGACCTCGGACGCCATCCACCACATCGCCAACTACTTCAGCTCAGGGCTGCCGAAACTCCAGGACGAAATCACTCCGATCgacgaaaaggaaaatttagaAAGCTCAGAGGGCGAAGTCAGGCTCCCAAATTTGTCCGACGCTCTTGTTCTACCCGACGACAGTGTCGCCCAACTCTTAAGCGATCAGTCGCCGTTCAATGAACAGTTTGTTGAGGTGTTTAGTGAGCCAGAGCCTCCGGTCATTGCTAAAAAACCGAGGCGAAAAAACGGCCCGCCTGTTTCTTACAGTTGTTCAACGTGTGGACGTTCCTTCAGTAAACAATCGTTACTAGTCCGCCACGTGCGGGTGCATACCGGGGACAGACCATTCGAGTGTCAGTACTGCGGGAAACGGTTCAACCAGAAACATGTACTTGGAGAACACATCAAAGCATACCACGAAGGTGTTCGGCCGAACAAACAGTATTCTTGTCCGTACTGTTCGTttaaaagtgtgcagaagggTAACTTGAAAGTTCATATTGGAAGGCTGCACCAGTTTGCGTACTATCTGGAGAAGTGCAAGGAGAAAGGAACCTCGAGGACGAGCGGGATTAAGTCGAAAGACGACGCTCTTGAAGAGACTGTTGTGGCGGGTATTGTGGAGAGTTTAGATTCGGGTGAAGACCGTAACCTGGGTTTAAGCATGACTGAAGATAGGAATACTGATCTGGAGCAGGTTATGGGAGAACTTTTCCCCCAGGTCACTTAA
Protein Sequence
MFEWTQADGQYIQVPGFVSPQGSVSIFLPPEFMDVNVEKQDELLNIPMGGDMQDVEFEFDSPPVAILEDNTLLAIEHFQRMDDEESQSGLIYQNQVIEEVEDDEMLTNYSKTLKLDSVDEEKDEQDKTVPVKKSGRPKKNPLPPNGLGPFRCERCDDEFKNYVDYLTHKKIHFAQKKIPCIHCNESFNKEKNLKLHEALRHTHNLICPECQKCFARFAAFKAHLAFHEEDDTIPCPVCGEEFELNLMLEQHILKLHKPKEQAKSFNPTFRVTSTLSRFSCSTCSRPFTNYLSLKNHRKEHDRFKVEFDVFGRPKRKKRAAKKIGRLLPCTQCEKKFDRPSQLQRHMRVHTGEKPFVCHVCDTAFNQKGTLTVHMAKHNGSKPFECPYCGNKFTQRGNLISHVSKAHQFIERGKDRFDCPDCPCSFAKQQALHCHITRFHEIRKKEAQEQQAKEQQNEEMIQEADTVVDMDILQKALRESGLRAEEIPSFDIGLVDQQPPSSPLPEEEAEQEAEDEEQEQEVVETPVLNLKEVKSDGSAVWHTVAVHYDGTGRWYGCHTCKKHFKKPSDLLRHIRTHTQEKPYRCNVCYRAFAMKPTLISHQRTHTVRPTYDCHVCSKQLSCKSALQRHLETHETSGNFPCSPCELAFRSASQLKEHQTTQKHKATSQASLPPPYVRMEKNGGFKIEISRKERFLENSQSASFEERPHKCEICLVRFRKSSHLKQHLMIHTGARPFKCNVCEKSFCKYGVLKTHIKTHLGLKPFTCKVCQATFSMRGSLNRHCQTLHSDERPYLCPVCERTFKTSQQCKKHMHRTHIKNTEKVSYSKEPEEKTNEEVEEDEQEMVEALPSAVDIGAEDVNQSFFADETGTITLPPLSKESIQELEQTLNQQFFSTVVTTVDPIANEVYLESPKELLLGVNMEVSTKLTALQSLPLLPLKFCAETLRSFWADATEPPAYDRVGDSVTDEDYGAADGLTTVTDMFQILPDGTGNLCGYPVLADVESRQVTPVEGPEKKMADVGSERKTVRVLTCDQCGWKTQSERALMRHLTEHYQNVRPRIKRTKAPVKEFTAEETAELATKYLSACASESEKILVAAAAEKIGRVSDRRGKKKKRPSVRCEKCDRGFTRNSDLIRHERTHTGERPYQCELCERRFTVKSTLVCHMKTHSTRPILTCHVCGAEFSARSSLKVHMRLHTGARPFPCPLCLERFRTSGHLKNHIESHTSNKPIRPWTSDAIHHIANYFSSGLPKLQDEITPIDEKENLESSEGEVRLPNLSDALVLPDDSVAQLLSDQSPFNEQFVEVFSEPEPPVIAKKPRRKNGPPVSYSCSTCGRSFSKQSLLVRHVRVHTGDRPFECQYCGKRFNQKHVLGEHIKAYHEGVRPNKQYSCPYCSFKSVQKGNLKVHIGRLHQFAYYLEKCKEKGTSRTSGIKSKDDALEETVVAGIVESLDSGEDRNLGLSMTEDRNTDLEQVMGELFPQVT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-