Basic Information

Insect: Mesopsocus fuscifrons
Gene Symbol: -
Assembly: GCA_950004255.1
Location: OX465375.1:14424936-14429539[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 35 0.00014 0.0089 16.5 0.9 1 23 17 39 17 39 0.99

2 35 0.0081 0.52 10.9 0.5 2 23 46 67 45 67 0.96

3 35 0.00017 0.011 16.2 0.9 2 23 72 94 71 94 0.95

4 35 0.00015 0.0093 16.4 0.1 2 23 103 124 102 124 0.96

5 35 0.0082 0.52 10.9 3.1 2 23 130 151 130 151 0.98

6 35 0.00015 0.0094 16.4 0.4 1 23 157 180 157 180 0.97

7 35 6.3e-06 0.00041 20.7 0.1 2 23 188 209 187 209 0.96

8 35 7.5e-05 0.0048 17.3 1.3 1 23 218 240 218 240 0.97

9 35 7.5e-05 0.0048 17.3 0.5 2 23 256 278 255 278 0.95

10 35 0.15 9.8 6.9 0.4 2 23 288 308 287 308 0.94

11 35 2.7 1.7e+02 3.0 3.3 2 23 314 336 313 336 0.94

12 35 0.34 22 5.8 5.6 1 23 342 365 342 365 0.98

13 35 0.00091 0.059 13.9 3.6 3 23 371 391 369 391 0.95

14 35 0.0013 0.086 13.4 1.4 1 23 400 422 400 422 0.98

15 35 1.3e-05 0.00081 19.8 0.2 1 23 429 451 429 451 0.98

16 35 2.3e-05 0.0015 18.9 0.1 1 23 457 479 457 479 0.99

17 35 0.001 0.067 13.7 0.2 1 21 485 505 485 510 0.93

18 35 0.0002 0.013 16.0 0.1 3 23 520 541 518 541 0.95

19 35 7.4e-06 0.00048 20.5 1.3 2 23 546 567 545 567 0.95

20 35 1.3e-07 8.2e-06 26.0 1.8 1 23 577 599 577 599 0.97

21 35 0.13 8 7.2 3.5 1 23 605 627 605 627 0.97

22 35 0.01 0.66 10.6 1.2 5 23 690 708 680 708 0.90

23 35 3.9 2.5e+02 2.5 0.5 3 23 713 734 712 734 0.84

24 35 1.8e-05 0.0011 19.3 2.0 1 23 741 764 741 764 0.98

25 35 0.24 15 6.3 0.0 1 21 770 790 770 791 0.94

26 35 0.0011 0.069 13.7 2.6 1 23 799 822 799 822 0.94

27 35 6.6e-05 0.0042 17.5 1.2 2 23 826 848 825 848 0.96

28 35 0.0012 0.077 13.5 0.4 3 23 858 878 856 878 0.96

29 35 0.004 0.26 11.9 0.5 2 23 884 905 883 905 0.97

30 35 1.9e-05 0.0012 19.2 0.1 3 23 913 934 911 934 0.95

31 35 0.0027 0.17 12.4 0.8 3 20 941 958 939 961 0.93

32 35 0.0013 0.085 13.4 0.7 1 23 970 992 970 992 0.97

33 35 1.7e-05 0.0011 19.3 0.2 1 23 999 1021 999 1021 0.98

34 35 2.3e-06 0.00015 22.1 0.1 1 23 1027 1049 1027 1049 0.99

35 35 0.00014 0.0091 16.4 0.2 3 23 1057 1077 1055 1077 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	35	0.00014	0.0089	16.5	0.9	1	23	17	39	17	39	0.99
2	35	0.0081	0.52	10.9	0.5	2	23	46	67	45	67	0.96
3	35	0.00017	0.011	16.2	0.9	2	23	72	94	71	94	0.95
4	35	0.00015	0.0093	16.4	0.1	2	23	103	124	102	124	0.96
5	35	0.0082	0.52	10.9	3.1	2	23	130	151	130	151	0.98
6	35	0.00015	0.0094	16.4	0.4	1	23	157	180	157	180	0.97
7	35	6.3e-06	0.00041	20.7	0.1	2	23	188	209	187	209	0.96
8	35	7.5e-05	0.0048	17.3	1.3	1	23	218	240	218	240	0.97
9	35	7.5e-05	0.0048	17.3	0.5	2	23	256	278	255	278	0.95
10	35	0.15	9.8	6.9	0.4	2	23	288	308	287	308	0.94
11	35	2.7	1.7e+02	3.0	3.3	2	23	314	336	313	336	0.94
12	35	0.34	22	5.8	5.6	1	23	342	365	342	365	0.98
13	35	0.00091	0.059	13.9	3.6	3	23	371	391	369	391	0.95
14	35	0.0013	0.086	13.4	1.4	1	23	400	422	400	422	0.98
15	35	1.3e-05	0.00081	19.8	0.2	1	23	429	451	429	451	0.98
16	35	2.3e-05	0.0015	18.9	0.1	1	23	457	479	457	479	0.99
17	35	0.001	0.067	13.7	0.2	1	21	485	505	485	510	0.93
18	35	0.0002	0.013	16.0	0.1	3	23	520	541	518	541	0.95
19	35	7.4e-06	0.00048	20.5	1.3	2	23	546	567	545	567	0.95
20	35	1.3e-07	8.2e-06	26.0	1.8	1	23	577	599	577	599	0.97
21	35	0.13	8	7.2	3.5	1	23	605	627	605	627	0.97
22	35	0.01	0.66	10.6	1.2	5	23	690	708	680	708	0.90
23	35	3.9	2.5e+02	2.5	0.5	3	23	713	734	712	734	0.84
24	35	1.8e-05	0.0011	19.3	2.0	1	23	741	764	741	764	0.98
25	35	0.24	15	6.3	0.0	1	21	770	790	770	791	0.94
26	35	0.0011	0.069	13.7	2.6	1	23	799	822	799	822	0.94
27	35	6.6e-05	0.0042	17.5	1.2	2	23	826	848	825	848	0.96
28	35	0.0012	0.077	13.5	0.4	3	23	858	878	856	878	0.96
29	35	0.004	0.26	11.9	0.5	2	23	884	905	883	905	0.97
30	35	1.9e-05	0.0012	19.2	0.1	3	23	913	934	911	934	0.95
31	35	0.0027	0.17	12.4	0.8	3	20	941	958	939	961	0.93
32	35	0.0013	0.085	13.4	0.7	1	23	970	992	970	992	0.97
33	35	1.7e-05	0.0011	19.3	0.2	1	23	999	1021	999	1021	0.98
34	35	2.3e-06	0.00015	22.1	0.1	1	23	1027	1049	1027	1049	0.99
35	35	0.00014	0.0091	16.4	0.2	3	23	1057	1077	1055	1077	0.98

Sequence Information

Coding Sequence: ATGTCGCGTTGGCTGCATACCAAATCAGTGCACAAAAACAACTGGCGCTTCCGATGTACCGTTTGTGACTACGGCACAGCCCAAGAATCGCTCTTTAACAACCATATGAAAAAACACGATGCTCCATCCAGTATGAGGTGTGGGAAGTGTGACCAAGAATTCAAGAGCTGGTGGCGCTTTGAGGTGCACAACAAAATTCACCAAAAGAGCCTCAAGTGCGAGGTGTGTGGAAAAGAGTTTGATAAGCGAAAGAATATGCTCCGGCATGTCAGTCGAAATCATGTTGCGAGAAAGGAGCGCGACGTGCCCTGTCCCAAGTGTAGCAAACTGTTTTATGACAAATGGGCTCTCCGTGTGCATATGGAAGTGCACAGTGAGAAGAAGGAGCAGTGCCCATATTGTCTGTATACAACCTGTCACCCGAAAAATATGCGAGCCCATGTGAAAATCCACATAAAGCAATATGACTATGTGTGTGAGCAGTGCGGGCGTGGCTTTGTATACAACTTCATGCTCCGCGATCATCGGCTCAAAGAACATGGAGACGGCATGCCTCGCATTCCCTGCGGTGATTGCGGCAAGACCTTTGCGTCTCAGACCTATCTCAATGTTCACAAAATGTCTCATGAGCCGGGATATGAAAATCGCAACCATCAGTGTGGGATTTGTGGAAAAAAGTTTCTCACTCGTAGCATGCTGTTACGCCACGTTCGGGGGCACTCGCGTATCGTCGAATTTGAGATGTGTCTTACGAACATCAAGTTACGGTGTGAAATATGTAACCAGGAATTTAGCAAGCGGTATGAGCTACGTGCTCACCGTGCTCGTGAACACGGTGAGAAAGCTGGACAGCTTCGAGTTCCCTGCCAGCACTGCGGCAAGGCGTTGCTCCCTTCCTACATGAAGACTCATCTCCAAGCTCATTTGGGGAACTTGAAAAAGTGTCCACATTGCAGCTATGCGACGCCGTTCAACAGGACCCTCAAGTTTCACATCAGTAAGAAACATACTATGCAGTTCACATATAAGTGCGATTTATGTCAGTGTGGTTTCATGGAAAAGTGTGTTCTCAAAGAGCACATGAAAAGGAGGCATGGAGATGGTATCTGCTGCTCTGACTGTGGTCGATCTTTTCACTCTGAATATTACTTGAAACTCCATACGGAAATGCACAAACCCGACTACGAAATGAGAAATTATGTTTGCGATGTGTGTAGCAAAAGGTTTCTCTCGCGTAAAATGTTGCGACAACATTTACTAAGACATTCAGGGTTGAAAAAGGTGTACAGGTGCACCTACTGCGGAAAAGAACTGGCATCTAATGCCTCTCTGAAGGCGCACACGAACATTCACACGGGGTTGCGACCTTACGTCTGTGCGGTTTGTGGCAGTGGGTTCGCTAGGAGAAACTACCTAGTCGTACACATGCGCACCCACACCCAAGAGAAGCCCTATGTCTGCGCGGGATGTGGTGCAGCCTTTACCCAAAAGTCATCCCTTACTTTTCACTTGCGGCAGTTACGTTCCCATGGGGATGAGGCGTCACTGACCTTTGGCTGTGATGATTGCGGACGTCGCTTCATGTCGAGTGAAACACTAGAGCAGCACATCGTGCGAGGGCATGGGGCACGTTTGCCTTGTGAAATCTGCCATAAAACGTTCGCCAATAGCAAGAATCTACGCGTTCATAAGGAGTCGCACACTTTGAGCTTCGTTGAGCGAAGCTGCCATCAGTGTGAATTGTGTGGTAAACGCTTCGCATCCAGAAGCAACCTTTTGCGCCATATGAAGGCGCATTTGGGTGGGTGCATTCATCAGTGCAGATTTTGTAGGAAAAACCTCTCCTCGGAGACAACTCTAAAAGACCACGAAAAGATCCACACAGGGGAGAAACTCTTTGTCTGCGAGATGTGTGAAGCTGCCAAATTTAACCTTTCCTGGCTCGATGATATGGACGCTGCCTTAGATTTGGGGCCGTTGGACCAGGCACTGATTGTCGCTGATCCAATCATACTTCGTGGCGACGGCCTAGTGGCAAAATGCACGTTAGGCCGGAACTTGTGCATCGTATGCGACCAACAGTTTAGCACGAAACAAGAGTTCGAAATGCATGCGAGAACCCATCGGAAGGTGGCGTGTCCTCTTTGCAACAAAGTGTGTCTTACTGGGCTGCGGTTGATTAGCCACATTCGTAATGGTCACACTCCTCGTGCGAAGCCCTACCAATGCCCGTCTTGCGAAAAACACTTCTCCACCTCAAATTCTCTGTGGGTCCATAAAAAGACGGTGCACAAAAGTATGTTTGCATACACGTGCGATCGCTGTGGTTATGGAACAGACGTGTTGGCACTGCTCAGTAATCATTTGCAAATGGCAGGGGAGACTCATGCCGAGTTTCAATGCGACGCGTGCAGCAAGGTTTTTACAACGCACCAAAACCTTGACAAGCACACTTTACTTTTTCACACCGTACAGACGTGCACGTTGTGTGATAAAGAGTACAGCTCACGCAACAATCTTCTTCGGCACGTTCAGCGCTCTCATGGCAAGatgaaacgaaaaaatatCGCTTGCCCTCACTGCCCCAAACTCTTTCACGCGCCCTGGCAGCTCAAAGTTCATATGAATGCTCACAACAACACCCGACTTCAATGTTCTTTGTGCAAATATAGTACAGTGTATCCCCAAGCGCTTAAAACGCACACCAAGATTCATTTGAAGCAGTACCATTCCATCTGTGATGGGTGCGGTAAAGGATTTATGAACAAGAGTGCGCTTAAGAATCACTTGGCACGAGAACATTTGGGTATGTCATTGGCATGCTCTGTGTGTGGCAAATCATTCTACGCAGCCAAATATCTAAATCTTCACATGGAGTGTCATCAGCCCGACTACTGGAAGCGCAATCATCCATGTGAACTGTGTGGACGACGTTTCCTTCGCAGACCTATGCTTTTGCGACATTTACGTGCCCATGAAGGACTAGTGCGctcctacaagtgtgccgacTGTGGAAAAATTCTCTCATCCTCAGCCTCCCTAAAAGACCATCGCAATATCCATACAGGCCTGCGTCCCTACGTGTGCGAATTATGTGGAAACGCGTTTGCTCGGAAAAACTACCTCATTGCTCATATACGAACGCACACCAAGGAAAGGCCATTTGGTTGCGGGGTCTGTGGTGTGCGTTTTTCACAGCGTGGAGCTCTCACCATGCATCTCAAGAAGCATTGA
Protein Sequence: MSRWLHTKSVHKNNWRFRCTVCDYGTAQESLFNNHMKKHDAPSSMRCGKCDQEFKSWWRFEVHNKIHQKSLKCEVCGKEFDKRKNMLRHVSRNHVARKERDVPCPKCSKLFYDKWALRVHMEVHSEKKEQCPYCLYTTCHPKNMRAHVKIHIKQYDYVCEQCGRGFVYNFMLRDHRLKEHGDGMPRIPCGDCGKTFASQTYLNVHKMSHEPGYENRNHQCGICGKKFLTRSMLLRHVRGHSRIVEFEMCLTNIKLRCEICNQEFSKRYELRAHRAREHGEKAGQLRVPCQHCGKALLPSYMKTHLQAHLGNLKKCPHCSYATPFNRTLKFHISKKHTMQFTYKCDLCQCGFMEKCVLKEHMKRRHGDGICCSDCGRSFHSEYYLKLHTEMHKPDYEMRNYVCDVCSKRFLSRKMLRQHLLRHSGLKKVYRCTYCGKELASNASLKAHTNIHTGLRPYVCAVCGSGFARRNYLVVHMRTHTQEKPYVCAGCGAAFTQKSSLTFHLRQLRSHGDEASLTFGCDDCGRRFMSSETLEQHIVRGHGARLPCEICHKTFANSKNLRVHKESHTLSFVERSCHQCELCGKRFASRSNLLRHMKAHLGGCIHQCRFCRKNLSSETTLKDHEKIHTGEKLFVCEMCEAAKFNLSWLDDMDAALDLGPLDQALIVADPIILRGDGLVAKCTLGRNLCIVCDQQFSTKQEFEMHARTHRKVACPLCNKVCLTGLRLISHIRNGHTPRAKPYQCPSCEKHFSTSNSLWVHKKTVHKSMFAYTCDRCGYGTDVLALLSNHLQMAGETHAEFQCDACSKVFTTHQNLDKHTLLFHTVQTCTLCDKEYSSRNNLLRHVQRSHGKMKRKNIACPHCPKLFHAPWQLKVHMNAHNNTRLQCSLCKYSTVYPQALKTHTKIHLKQYHSICDGCGKGFMNKSALKNHLAREHLGMSLACSVCGKSFYAAKYLNLHMECHQPDYWKRNHPCELCGRRFLRRPMLLRHLRAHEGLVRSYKCADCGKILSSSASLKDHRNIHTGLRPYVCELCGNAFARKNYLIAHIRTHTKERPFGCGVCGVRFSQRGALTMHLKKH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -