Basic Information

Gene Symbol
Ncor2_1
Assembly
GCA_950004255.1
Location
OX465378.1:8976414-8991783[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.9e-14 9.6e-11 41.7 0.0 3 44 137 178 135 180 0.96

Sequence Information

Coding Sequence
ATGCCTATATActccccagGTCGGCCGGGTCCTCACAACTGTGCTATTTGCAATAGCGCAATTGACTCCATTGCTCACTCCCGCCATCTTCCACCCAGCCAGGCTTTCCAGTACGGTCTTACCGAAAAGGACATCCCTTCTGGAGCCCGCGTTTGCAACAGTTGCCGGTGCAAGAGCGTTCGATCCCGATGTATGGTTTGTCCTCTTCCTACATGCCCGAATGCGAAAGGCGTTGTCAAGAGACTAAGGACTGTCCCGTCCAAATGGGCTGTTCTTGCTCCACATGTCCTCGAACCCATTGTTCGTGACTTCAaaatccCGACTGGAACTTCAAAGTGTTGTTCAACGTGCTACGCACGGATCTCACGGCGACTCGCCCCCTTCATTCAGCCTGAAGAAGATTCCACGAGATGGACGGACGCTGAAATAGAAACTCTGCAATCGGCCCTGAGGCAAAATGGCACACAATGGCTCAAAGTCGCTGAAATGTTGCCGGGAAGGACACCCCAACAATGCAAAATCTTCTATTTCAATAGTCGAAAGAAATACAACCTGGACGCCATTGTGAGGGAGTTCGCGGCCAACGCTGGGGAGGATAGAAAACCAGCGGTAACCGACGAGGAGGAGTCCGGGTCGTCGACGTCAAGTTGTGACGAGCAGCCGGTGGGTGGTGTTGATACCAGTGATACTGCTAGCGCTGGAAGCCCTGCTAAACACACTGACAACCACCCATCTCTCCCTGGTAAAGAGCCTGCCAGGGTCACGGAACCCCGAACGCACGCCGGGGATAGAGACTACGATAGTTCCGCAACTGAGACAGCAGACGAGGGACAAACGACGGACAGCCATGTCTATTCCCATCTTCCGGGTACTTCTATAACTGCCGTAAACGGACCTCCGTCTCTCAGCCCACCTAGAACGGTGAAAGATCTAATGGGGACCGTGATTGAGAAACAGCTGATGAAGTCTCCGGGGGGAGTGCCAACTGCTTGCACTGGGCCTCCAACCATAAGCTCCATTCTTGGAACCGACCCTGCATATAAACGATCTCCCTGTGACGCTCTCGCCACTCTTTCGttggtGAACAACATAGACCTTGGAATGGCACCCTTGTCACCGATACCGGGTCCTGATGTGTCAAAAGAAGGTTTAGTAGTTGTTCAAATGCCGCAAGGTCTTCGCGAGCGCCGTGAGCCTGAACCTGAAACTCTGGACCTCAGCATCAAGAAGCGCGATAATCCTGGAGGCTACGCATCTGCTAGTTCCGTCCAACACTTTCCCTACACTCTGCCGTCTCATTCCAAGAGTAGTGCGAGTATTTACCAGAGGGACCCGCATTACTACGCTCCTCAGACAAGCAAGCCGCCCACTCTGCAGACGCCTCATCTCGTCATGTCCCACTCTCGGGCACCTCACATACCCAAGGTGaacaagCAGGGTCCCCCACCAGGGATGCCGAAACTCTCTCCGAAGATGCTCCCTACTGGGCAGAGTTCGAAACCTGGCTCGATAACACACGGCACTCCTGTGCAAGGTGGTCCACGGTATGACGCAGGAATGCTACGTCAGATTCAGCAAACTCAGCATAAGGAAACTGGATCGATAACCCAAGGGACACCCGTTCATCACATTATTCCCAATGCCAATGATAAGAGGCAGAACATGAGCTATGACTACTACAAGCGGGCTGCCCCGGTTACAACGACTACAGGGTTCAGTTCTCCATTCCCGCCCAACAGGCAGCCTACATCATACCCTCTCGAGCAACAGTTGTCATCACGCCAGATCATCATAAACGACTACATCACATCTCAGCAGATGCACGGGCCGCGCCGAGTGACAAtgcaaggaaatgaaaaagggGATGGTCGACAGATGTCGCAACTTTTCTATTCCGCCGCGCCTGGCAGTATGTACTTACCTAGTCGTTCAAGCGTTGAAAGTGCAACGCCACCACCACTACGGCAAGGCGTCATTCAGAGACACAACACGATTCCTCCATCAACTCAGAGCCAGGGCCGAGTTCACTCAACTCCCCCCTCTGGAAAAGTTCATTATCCACCTCCTGGACACGAGGCATTCAGCTCTCTAGTGGAGGCTGCAGTGCAGCAGCCTTCACTGCCTGTTCCTTCAGCTGACAAGAAACATCTCTCCCACCGCGAAAGCCATCATGAGGGCCTCGGGAAAACAATGGCTGACTCAATTTCTTCATCGCGTATGCTTGAGCATGGGCGGATGTCCACTAACCCTGCTGCAGAGCAGCAGCGGCTGCGACAGAACCACGAGCGCGAGCGCGAACGGATTATGTCGCAGCGTGAACAAGAACAACGCTATCAGCGTGAGAGAGAGCAAAGGGAGTCGCATCATCAGCAGCTTCAGTTGCAGATGCAACGTCAGCAACAAGCTCGCCTCGAGCAGCAGCGAATGGAGCAGCAAAATCAGCAAGCACGCATGGAGCaacaagcACGTATAGATTACGATAAAAGCCGAATGGAGCAACAGAGAATGGAAGCAGCGCGATTGGAGCAGGCCGGCCAAGCTCGAATTGATTACGAAGCTAAGCAACAACGCCATCAACAACAGTTGGCTGCTTTTATGGATGCGCAACAGAGGGCTACGACTGAGCGGGAAAGAGAAAAAGATTGGGACCGTGATCGTGACCGTGAAGCTACACGCATTCTTATGGGCAATTATCAGCGAGAACGCATGCAGCAAGCCGCCGCCCGCGCTGCCGCTGAGTCTCCATCTCCTAACAGAGGGACCCCTGGTGCAGGTCAACGCACTGAAGATTCCGCCATGACAGCAGCGAGCCTCATTGACGCGATTATCACTCACCAGATCAATCAGACTTCGGAAGCGGGTCCCACCACCTCTCAGACTACTGGCCCGTCCCAGACTCGTCCTGGCGATCGTCTCTTTCAGGGGTTTCTCCGCGAAGGACCACCTCAGCACTCTGAATCCAATGGGAAGTTGTCCCCTATGAAACGTGCTGGGAGTCCTTTAGAACGAGAGCCTATTAAAAACATCTCTTTGGCTGACCACATTGACTCCATCATCTCTAAAGACTACAACATGACTTTTCCACACTCGTTCAATTTGCCCCAAGACGGTATGAACGATCAGCAGAATTGGAAAATACGCCGCCCTGGAAATAAAGAAGCTGAGGCTCCTAGGGACCGTTCTTCAGAACGCCCTGAACGTGCAGAACGTTCTGATCGAGGAGAGCGCCCGGACAGATCGGATCGTCCGGAACGAGCTGAACGGGTGGAACGCGATAAGAGCGACGAGCGGCAAATCATTCGGATGGCACAGGCTCAGCCTAGTAGCAGCAAGCCCTACCATGAGCCTATGTCTCCCCCTGACCAATGGAGCAACAGATACTACCCTGAGAAACCGTCACACCTCTCTCCTCTGGACTATGTGAAGAATCGCATCGTGGAGGTGATGCGGACTTCCGAGGACAAGGAGAGTGATGAGAAGAGCAAGGAAAGCGGAAGTCCAACAGAGGCGACCCCAGATGAGGGAGCCAAGGGTGGGGACCCCCCTCCCACTTCCTCCGCCCCGCCACCTACTTCTTCTTCATTCTCCTACCCTTATGCTTCCATGGGCGTTCACGGAGGAATGGCCCCCCGCTCACCCACCCCAGCCAAGTCGGTGGATGAACAACCTCCCATCTTGTCCGCACAGTACGACCCTCTCAGTGACGAAGACGACTAA
Protein Sequence
MPIYSPGRPGPHNCAICNSAIDSIAHSRHLPPSQAFQYGLTEKDIPSGARVCNSCRCKSVRSRCMVCPLPTCPNAKGVVKRLRTVPSKWAVLAPHVLEPIVRDFKIPTGTSKCCSTCYARISRRLAPFIQPEEDSTRWTDAEIETLQSALRQNGTQWLKVAEMLPGRTPQQCKIFYFNSRKKYNLDAIVREFAANAGEDRKPAVTDEEESGSSTSSCDEQPVGGVDTSDTASAGSPAKHTDNHPSLPGKEPARVTEPRTHAGDRDYDSSATETADEGQTTDSHVYSHLPGTSITAVNGPPSLSPPRTVKDLMGTVIEKQLMKSPGGVPTACTGPPTISSILGTDPAYKRSPCDALATLSLVNNIDLGMAPLSPIPGPDVSKEGLVVVQMPQGLRERREPEPETLDLSIKKRDNPGGYASASSVQHFPYTLPSHSKSSASIYQRDPHYYAPQTSKPPTLQTPHLVMSHSRAPHIPKVNKQGPPPGMPKLSPKMLPTGQSSKPGSITHGTPVQGGPRYDAGMLRQIQQTQHKETGSITQGTPVHHIIPNANDKRQNMSYDYYKRAAPVTTTTGFSSPFPPNRQPTSYPLEQQLSSRQIIINDYITSQQMHGPRRVTMQGNEKGDGRQMSQLFYSAAPGSMYLPSRSSVESATPPPLRQGVIQRHNTIPPSTQSQGRVHSTPPSGKVHYPPPGHEAFSSLVEAAVQQPSLPVPSADKKHLSHRESHHEGLGKTMADSISSSRMLEHGRMSTNPAAEQQRLRQNHERERERIMSQREQEQRYQREREQRESHHQQLQLQMQRQQQARLEQQRMEQQNQQARMEQQARIDYDKSRMEQQRMEAARLEQAGQARIDYEAKQQRHQQQLAAFMDAQQRATTEREREKDWDRDRDREATRILMGNYQRERMQQAAARAAAESPSPNRGTPGAGQRTEDSAMTAASLIDAIITHQINQTSEAGPTTSQTTGPSQTRPGDRLFQGFLREGPPQHSESNGKLSPMKRAGSPLEREPIKNISLADHIDSIISKDYNMTFPHSFNLPQDGMNDQQNWKIRRPGNKEAEAPRDRSSERPERAERSDRGERPDRSDRPERAERVERDKSDERQIIRMAQAQPSSSKPYHEPMSPPDQWSNRYYPEKPSHLSPLDYVKNRIVEVMRTSEDKESDEKSKESGSPTEATPDEGAKGGDPPPTSSAPPPTSSSFSYPYASMGVHGGMAPRSPTPAKSVDEQPPILSAQYDPLSDEDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-