Mfus015802.1
Basic Information
- Insect
- Mesopsocus fuscifrons
- Gene Symbol
- -
- Assembly
- GCA_950004255.1
- Location
- OX465380.1:16172637-16174933[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.6e-08 3.8e-05 23.3 0.0 2 39 22 58 21 63 0.87 2 2 7.7 3.1e+03 -2.0 0.0 2 12 436 446 436 448 0.86
Sequence Information
- Coding Sequence
- ATGGCGTCCCCTGAATGTTCGGAAAAACAGGAGACGAAGCGTGGAAAGTATGTTAAATGGGGACCTGATGACTTGAAAGCGGCATTGGAGGCAGTAAAGGATGGAAAAGGCGTCAATGCAGCTGCCAAAGTGCACAAGATTCCTTCGTCAACGCTCAAAAcgtatttgaaaaaaaaggcTGGCGAAAAAGTCGCCCAAGGTCGACCAAAGATATTTCTCCCAGACATGGAGAAAGAGCTAGTTAaacatattttgttatttgagGAGAGGATGTTCGGATTAACAATTAAAGACATAAAAAAGTTAGCTCATGATGTGGCCGAAAAATTGGGAATAGCCCATAACTTTAAGAATGGTTGTGCTGGAAATAAGTGGTATTATAACTTCATGAAAAGGAATCCCACCCTTTCCTTAAGGCAGCCAGAGTCTACGTCATTGGCAAGAATGCGAGGATTTAGCCGAGAAAgggtaaacaaatttttcgaTTTATTGGAGGACACGGCTGACAAACTGAAAATTGACGGTACTCGGATATTCAACGTAGATGAGTCTGGGTTCAACCCCGTCCAAAAGAAGCCTCAAAAAGTCGTTGGACTTAAAGGAAAGCATCAGGTGGGTGCAGCTGCTAGTGGCGAGAGGGGCGTCAACACAACAGTAGTTTGCTGCGTCAGCGCGTCTGGATTTTATGTTCCGcccatgtttatttttaaaaggaaGCGTCATGACGAAAGCCTAGCGGTTGGAGCGCCGACTGGAAGCGTCGTGACAATATCAGACACTGGTTATATCACttctgatttgtttttaacctGGCTGAAGCATTTTCAAAAGTCTGTCATGGCAACGAAGGAAAATCCTGTCTTGTTACTCCTCGACGGACATTCGACTCATAGTAAGAACCTGGAAGCTCTACTCTATGCTCGAGAACACGGCATTGCACTGCTGCAGTTGCCTAGTCACGCAACGCATCGAATGCAGCCTCTAGACGTTGGGTTCTTCCGGCCCTTAAATGTGTATTACATACAGGCTATTGAGAAATTCTTACGTCAGCATCATGGAACCGCCGTTAAGCCTTGTAACTTGGTTGCGTTGCTCTCAGAAGCTTACGGCCGCGCTGCTACTATGGTTACAGCGGAGAATGCATTCCGAGCGTCCGGTATCTGGCCTGTTGATCGACACATCTTCAAAGACTGTGATTTTGCTGCATCTGACGCCCTAGAGTATCCAGATTCTGGCATCAATTCGCCGTCTTCAACTAGCATTCCAAGTCGTATGGACCCAGTATCTTCCTCACCGTTAGTTCCTCCCACATCTTTTGCAGCTGCCTTGAAGGAAATCTCGCCGCTTCCGGCTGCAGGTTCAAATACTGTTACAAAAAGAAAGCAACAGGATGCAGTTCTTCTAACAAGCACTCCGTATAAAGACGAATTGGaaggcaaaaaagaaaaaatgtcaaagaAGGCTCCACAGAAAAAACGCCCACGCAGACGTCTTTTTCCTTCCGAAAGCAGTGATGAGGACTTCGACCTGCCCGTACAAGCAAAGAAGCGTCAGTGCGAAGCCAAACAGCGCAAGCGGCAACACAGAGATTTCGTTCTCGTACAGTTTGTTTGTGAAATGGACAAGAGAGTGAAGCATTATGTAGGAGAAATCATCGGTGATGCAGAAGAACGCGGCATTAAGGTGAAGTTCATGAGGAAAAAGCTGGAAAAAATGGTGTATTTCACTTTTCTCGACGAAGAGGACTTCGTTGAGTACAAGCAAATTGTTGCTACGATTGGGAACTGGACTTGCACTACAAGGGGGCTTTTCCAGTTCCCCAACTTACCCGATATGTTAGACAGCGGAATGACTACTGTTTATTAA
- Protein Sequence
- MASPECSEKQETKRGKYVKWGPDDLKAALEAVKDGKGVNAAAKVHKIPSSTLKTYLKKKAGEKVAQGRPKIFLPDMEKELVKHILLFEERMFGLTIKDIKKLAHDVAEKLGIAHNFKNGCAGNKWYYNFMKRNPTLSLRQPESTSLARMRGFSRERVNKFFDLLEDTADKLKIDGTRIFNVDESGFNPVQKKPQKVVGLKGKHQVGAAASGERGVNTTVVCCVSASGFYVPPMFIFKRKRHDESLAVGAPTGSVVTISDTGYITSDLFLTWLKHFQKSVMATKENPVLLLLDGHSTHSKNLEALLYAREHGIALLQLPSHATHRMQPLDVGFFRPLNVYYIQAIEKFLRQHHGTAVKPCNLVALLSEAYGRAATMVTAENAFRASGIWPVDRHIFKDCDFAASDALEYPDSGINSPSSTSIPSRMDPVSSSPLVPPTSFAAALKEISPLPAAGSNTVTKRKQQDAVLLTSTPYKDELEGKKEKMSKKAPQKKRPRRRLFPSESSDEDFDLPVQAKKRQCEAKQRKRQHRDFVLVQFVCEMDKRVKHYVGEIIGDAEERGIKVKFMRKKLEKMVYFTFLDEEDFVEYKQIVATIGNWTCTTRGLFQFPNLPDMLDSGMTTVY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -