Mfus009014.1
Basic Information
- Insect
- Mesopsocus fuscifrons
- Gene Symbol
- -
- Assembly
- GCA_950004255.1
- Location
- OX465377.1:1765039-1771395[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-11 1.5e-08 34.2 0.0 3 41 13 51 11 54 0.94 2 2 9.1e-06 0.0036 17.0 0.0 1 37 450 489 450 494 0.92
Sequence Information
- Coding Sequence
- ATGGCCCCTGTGGCTGAAAGGAGAAAGTGGAACCAGGAAAGCATGAAAAAGGCAGCTGAAGTTGTCCAGAGGAAAGAGATTGGGTATTTAAAAGCATCCAAAATATTTGGAGTTCCTAAAGGCACTCTTGAACGATATGTGCGAAGAGGAGAGGGTTGGCAGGAGCAGATGGCCAAGAAGTTAAGACGCAGTCCGCTGCTGAATCATCCGGGCATACCAATAACCATCTACGAGGTTGCTGCTCTTGTGAACACAGCCTTTGACGCGTCCTTCACCCCGAGAAATATCAAGTCAGGCTTCGCCACAACTGGCATCTGTCCTTTTAATGATGTAATCTTCACTGATGCTGACTTTATAGAGTCATCAGTAACCGATAGACCTCTGCCGAGCGAATCAGTTACGTCAGAAAATGAGATTGCTCAGCCTGTTATAGACTCGGTATCAGCAACAACAGAAGAAAATGGCACTGAGGACCAGCCATCAGTTTCCAAACCATCGTGCTTGATTGTGTCACCCCAGGATATTCGAAGCTATCCGAAGGCGGGACCAAGGAAAAATCAGGGCCAGCGTCTGGATGGTAGAAGAAAGAAATCAGCAGTCTTTACAGACACACCTGAGAAAGAAAATCTGATTAAGAAAAGTGAAGAGAAAGAGAGCAGAAAGAGAAAAGCTGATgagaggaaaaaaatagcCGCAGAAAAGAAGCAAGAGAAGGCGAAGAAAACTTCACTGATTCAGAAACTTCCCCAGAAGAGGATGAGCTGGACGACAATGGAATCTGTGCTACTGATGAGGATgtttcctgcagGTGCAAACAAAGCAAGCGAGACTAGGGACATTCGTCACAACTTTGAAATATTTGGCACGAAATTTAAGATTAGCCGTTTACTGTCAACAATAACAATCAAAATCAAGATGGAGGAATCGCAAAGtgtcagtttgaaaaaaccgcGAGCCGGCCGCGTTTCGAATTTGCAAATCGAAATGCTCATTGATTATCTGGAGGCCCACCCTATGATGGCCAAGGGGAAACTTCTGGGGCTCCTCGGCCGTCATAGGGCGGGCCAGATGTGGGAGACCCTAGCCAAGAAGTTGGAGGAGGTGGGGCCCCCGAAAACTGCCAAGCAGTGGCAGAtaGTATGGAAAGATATGAAGATGCGGGCTCGAAAAAAAAAGGCCGACCTAAATGAAATACGGAGCGCCACTGGGGGAGGTTCTCCTCCAGCGGCCCTTACGGCGGGTGACCAGAGAGTACTAAATTTAATAGGGGAGGAGTCTTCGACAGGAATTGTCGGACTTCAAGAAATGCACAAAATGGGACCTAAGAAGAGAGAGTTTTTTTCCTCCACTGAGACGGACATGGCGTCTGCTATAGCAGAAATGAGGGCCCCAACAGGCAAACCTGCATCAGTAAGAAACGTCGCAAAGAAATTCAGTGTGCCGCATGTTACCTTGAGGAGGAAACTAGAAAATAATGAGGTTGTGGCGTGGTGA
- Protein Sequence
- MAPVAERRKWNQESMKKAAEVVQRKEIGYLKASKIFGVPKGTLERYVRRGEGWQEQMAKKLRRSPLLNHPGIPITIYEVAALVNTAFDASFTPRNIKSGFATTGICPFNDVIFTDADFIESSVTDRPLPSESVTSENEIAQPVIDSVSATTEENGTEDQPSVSKPSCLIVSPQDIRSYPKAGPRKNQGQRLDGRRKKSAVFTDTPEKENLIKKSEEKESRKRKADERKKIAAEKKQEKAKKTSLIQKLPQKRMSWTTMESVLLMRMFPAGANKASETRDIRHNFEIFGTKFKISRLLSTITIKIKMEESQSVSLKKPRAGRVSNLQIEMLIDYLEAHPMMAKGKLLGLLGRHRAGQMWETLAKKLEEVGPPKTAKQWQIVWKDMKMRARKKKADLNEIRSATGGGSPPAALTAGDQRVLNLIGEESSTGIVGLQEMHKMGPKKREFFSSTETDMASAIAEMRAPTGKPASVRNVAKKFSVPHVTLRRKLENNEVVAW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -