Mfus009685.1
Basic Information
- Insect
- Mesopsocus fuscifrons
- Gene Symbol
- bab2_1
- Assembly
- GCA_950004255.1
- Location
- OX465377.1:9921255-9926758[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.7e-12 1.9e-09 37.1 0.0 1 38 460 498 460 503 0.90 2 4 1.6e-12 6.2e-10 38.7 0.1 1 39 514 552 514 555 0.95 3 4 9.2e-17 3.7e-14 52.2 0.0 1 45 569 614 569 614 0.97 4 4 3.6e-18 1.4e-15 56.7 0.0 1 42 621 663 621 665 0.94
Sequence Information
- Coding Sequence
- ATGTCGGGACAGCATTATTGTCTGCGATGGAACAACTACCAAAGCAACATGACCTCCGTCTTCCATCAGTTGCTTCAGACTGAAGCTTTTGTGGATGTTACACTGTCCTGCAATGACAACTGTCTCAAGGCACATAAGGTGGTTCTTTCGGCGTGTTCGTCGTACTTCCAGAAGCTACTGATGCAGAATCCATGCAACCACCCCACTATCATTATGCCCCCTGACGTCTCCTTCAGCGACCTGCGGGTTATCATCGACTTTGTCTACCGAGGGGAGATTGATGTCGACCAGGCACAACTCCAGtcGCTGCTTAGGACGGCAGATCAGCTGAAAATCAAAGGGCTGTGTGAAGTGTCGGACTCACGGGAGGCAGAGGAGCCAGACCTGCCATACAAACACCACAACGTATTCGGCTCCGAACCTATAAAAACCGTCAGCTTTGAAAACGTGCCGCCACCGACCAGCTTTAAGAACGCGTTTGTACATTCCGATCTCCATTTTAATCAGACGCAGAGGTTCAAACAGAGTGGAAGCCCAACATCGTTCGGAGGAGAAGGATTTCTTTCTGTGCGTCACGTGACCGAGAGCAAGGACTTTGCATGTGGCACTGACATCCCTACTCATCACATCAAACGCCAGCTCACCAAAACTAAGGTGTGCGGGAGTGGGAACAGCTTGGCGGGAGGTGCGACTAGCCCAGTGCCTGTGCGGAAGAAAGCTCGGCCAGCCGTGCGGGACCGCGCGGTGCAGAGTGACGGCGAGCCCATGAATCTCCCTTCGCTGGCCATGGGCAGCCTCGGCGACCCCATGCGCCACGAGCCGCAGGTCTGGCGTTGGATTCAAAGCAACGGTGAACGTGTCCCGGAGTGTATCACGGTAGCGACCAACACTGAAGAGGACCAGAAGAACAACCCGATGGTGATCTTGGAGCGTCCTGTTGGAAACATGTCCATGATTGTACACAATCTGCCACATCCCCTGTCCCCTCACCAAGGTGTCGATGGCAGTAACAGCAACGCAAGCATCCACAGCTCTGGGGATCAGACCCCTCCTGAAGTGGAAATCCCTCCAGAGGCGCAGCCGCCTGCGCCTAGCGCTACTCTGGTGGAGAACTTGGACCTGTCAGAGCAACCGGAGCCAGAGACAGCGGAAGTCGATGCAGAAGAGTGTGGAAACGTTAAAGTCAAGTTTGAGACTCTCCGCTCCGTCGACCAAAGTGGTGACACAGTGGATATTGACAGCCATATGTCAGAACGGAATCAGGATGAGTCAGAGCAGTCGATGCAGACAATGATGATCACTCCAGAACTTCTAGGCCTTCTTCCTTCAAGCTCAGGGGAAGGTTGTGAGGGGGATGGGAAAGGCGGCAAAGGATGGACGCAAGAAGATATGGATCTTGCCCTGGACGCGCTGCGGAACCACAACATGTCGCTGACACGCGCCTCCTCCACGTATGGCATCCCCAGCACCACACTGTGGCAGCGCGCACATCGCATGGGCATCGACACTCCCAAGAAAGAGGGCAGTACGAAGAACTGGACAGAAGACAGTCTCAACAGCGCGTTGGAGGCTTTGCGCACCGGAACCATTTCCGCAAATAAAGCCAGCAAAGCGTACGGCATTCCCAGCAGCACACTGTACAAGATAGCGCGGCGAGAAGGCATTCGCCTGGCCGCGCCATTTAATGCGGCGCCAACCACATGGACGCAAGAGGACCTGGACCGTGCACTTGAAAGCATCCGATCCGGCCAGGCGAGCGTCCAGAGAGCTTCCACCGAGTTTGGCATTCCCACtgGGACTCTTTACGGCCGATGTAAAAGAGAAGGAATTGAACTTAGCCGAAGCAATCCAACGCCGTGGAGTGAAGACGCAATGGGAGAAGCCCTAGAAGCCGTTAGgGTTGGACAAATGAGCATCAATCAAGCAGCCATCCATTACAACCTTCCATACTCCTCCCTCTACGGTCGGTTCAAACGAGGTAAATTCGATACGGAAGACTCGAATCACAGCAACGGGGAAATGTCCCAGGGAATGATGCTTGTTAACTACCCCGACGGATACACTGGACTCCAGGCGTACCACCAGCAGCCGGGCAGTTGA
- Protein Sequence
- MSGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLSCNDNCLKAHKVVLSACSSYFQKLLMQNPCNHPTIIMPPDVSFSDLRVIIDFVYRGEIDVDQAQLQSLLRTADQLKIKGLCEVSDSREAEEPDLPYKHHNVFGSEPIKTVSFENVPPPTSFKNAFVHSDLHFNQTQRFKQSGSPTSFGGEGFLSVRHVTESKDFACGTDIPTHHIKRQLTKTKVCGSGNSLAGGATSPVPVRKKARPAVRDRAVQSDGEPMNLPSLAMGSLGDPMRHEPQVWRWIQSNGERVPECITVATNTEEDQKNNPMVILERPVGNMSMIVHNLPHPLSPHQGVDGSNSNASIHSSGDQTPPEVEIPPEAQPPAPSATLVENLDLSEQPEPETAEVDAEECGNVKVKFETLRSVDQSGDTVDIDSHMSERNQDESEQSMQTMMITPELLGLLPSSSGEGCEGDGKGGKGWTQEDMDLALDALRNHNMSLTRASSTYGIPSTTLWQRAHRMGIDTPKKEGSTKNWTEDSLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTQEDLDRALESIRSGQASVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRGKFDTEDSNHSNGEMSQGMMLVNYPDGYTGLQAYHQQPGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00993673;
- 90% Identity
- iTF_00993673;
- 80% Identity
- iTF_00993673;