Mfus004247.1
Basic Information
- Insect
- Mesopsocus fuscifrons
- Gene Symbol
- retn_1
- Assembly
- GCA_950004255.1
- Location
- OX465374.1:17350756-17360387[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-19 1.1e-15 57.8 0.0 17 89 36 106 32 106 0.94 2 2 2.4 8.7e+03 -2.8 0.0 32 38 254 260 240 277 0.61
Sequence Information
- Coding Sequence
- ATGTTGATACGAGGTGCCGCTGAGCAGGCTGCGGGTGAGGGCAGGTGGGCCGTGGGGCAGCCCGGAGCGAGAGCGCAACCCAGCGCAGTTGGGATCCAAATTGATCGAACTCCGATTAATCGGTTGCCCATCATGGCCAAGTCAGTATTAGACCTGTACGAATTGTATAACCTGGTGATCGCGAGAGGAGGTCTCGTCGACGTCATCAACAAGAAGTTGTGGCAGGAGATCATAAAGGGGCTGCATTTGCCCTCTAGCATCACGTCTGCAGCCTTCACGCTTAGAACACAatATATGAAATATCTTTACAACTACGAGTgtgagaagaaaaaactcaGCTCCCCGTTGGAACTGCAGGCGGCTATCGACGGAAACAGGCGGGAGGGGCGGCGCACAAGCTATGGCGGGTACCCAGACCTTATGAGGCGAAGCCCCGGGCCTCCCATGCCCCCTCAGATGAGCCAGATGAGCCCCCTGGGCCACCTGAGGCCGCAGATCAATGGCAATGGGCATATGCCCCACCCTGCTCTGCACCCTGCCCTCGCTCAGCCCCCCCTAGCAGCAGGACCTATCTCTGGTTTAGCGCCCGCAGACTTCGAAGTCCGCGTGGTCGAGTACATGAATAAAATGCTCGGCAGGGGAGTTGGTTTATCGGCAGGAGCTTCACCCCCGGGCAAGCCAGCGCTCCATTCGTCCCCTTCACCCCCCACCAGCACCTCTCCAAGGGAAGCCCTCAGCGCCCTGGAGATGTCCAGGCTTACGTTATGGAACCTCTACAACAACAATCACACGCCCACAACGCCAGAGCCACAGAAAGAGGCGCTGGACTTAGGTCTCAAAGAAGAGACTAAGCACCAGattacaAATGTAAAACGAGAACCCCAAGAAATAGGTCCCAACGGTCCACCAAGTAAGAAGTCCCTTATTCTTGATGAATCTataataaaagaagaaagcgGTGGTGGAGGGGGTAACGGAGGGGCCCACATCAAAATCAACAGCAGGAGTGACTCAAGGAGTCAAGACGGGTCTCTGTCCGTCAGCATGGAGATCAACGGGACTACGTATCAGGGCGTCCTCTTCGCTCAGACCTCGCGCGCCCACTGA
- Protein Sequence
- MLIRGAAEQAAGEGRWAVGQPGARAQPSAVGIQIDRTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYNYECEKKKLSSPLELQAAIDGNRREGRRTSYGGYPDLMRRSPGPPMPPQMSQMSPLGHLRPQINGNGHMPHPALHPALAQPPLAAGPISGLAPADFEVRVVEYMNKMLGRGVGLSAGASPPGKPALHSSPSPPTSTSPREALSALEMSRLTLWNLYNNNHTPTTPEPQKEALDLGLKEETKHQITNVKREPQEIGPNGPPSKKSLILDESIIKEESGGGGGNGGAHIKINSRSDSRSQDGSLSVSMEINGTTYQGVLFAQTSRAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -