Basic Information

Gene Symbol
osa_1
Assembly
GCA_950004255.1
Location
OX465373.1:16597802-16613858[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-25 5.8e-22 77.9 0.0 2 89 440 524 439 524 0.95

Sequence Information

Coding Sequence
ATGATCAGGCCGACCAAAGTTCCTCGTAGTCGTAGTCCCGACCCAACAGAACTGTCGGGCGCGAATAGCAATGATTCCAACAGCGGGCACGCGGGGCCTGCCACCCCCAACTCAGGAATGAGACCTACCCCCTCCCCTACAGGATCCACTGGCTCTAGATCCATGTCTCCTGCAGTTGGTCAGCAGAACATTCCGATGCCGCCGCGGCCGTCGAGCGGACAATCGGAGGCTCCACCGCCGCGGCTCAGCCACTCGCCGCTCACCTCGGGCGGGGGGTACCCGCAGCACCCGCAGCACCCACAGCATCAGTACAAGCAGCCTCCCTACCCCCAGCCCAACTACTCCCCCAGACCAGGGCCGGGTGCTCCCTACAGCCCGGCGCCTGCTGGCTACCCCCAGCAACCCAACAGCCAGTACCCTAGCAGACCGCATCAACCCGTCACCAATCACACACAATACCCtggGTACCAGACCTGGGGCCCGCAGCAGCCTGCACCTGGCCAGATGATGGCGAACCATGTGCCACCCAACGGAAAGGCGGGAGGCGCGCCGCCGTCCCAGGCGCCACCATCACCCAGTCAGCCGCCTGCCAACGCTGTGGGCCCGAGGCCGCACACACCACCGCTCTATTTAAAGCAGCACTTACAACACAAAATGGGATTCTCAGGGCCACCACCTCCACAGGGCCAGGGAGGTTACCCAGGGCAGGGAATGGGGCCACCGGGGGGCATGCACCACCCTATGGGCCCTCCTCCGCCGTCTGGTATGCATCACCCGGGAATGGGCCCTCCGCCTCCCCAAAATATGGGTCCTCCTCATGAAATGCCTCCACCACCTTCGTCTACTCCCAATTCGCACCCTTTGGCTGCCCATATGGAGGAGGCCCATGACAATGGAATCACCACAACTGCTGGAGGAGGCGGTAGCGCCACACACGTGTCCCCCGCGTCCCTCGGCAGCGTGACCAGTGTCGTCACCACGGGGCCTGACGGCCAGCCCATGGATGAGGGCTCGCAGCAGTCCACGTTATCAAACGCTTCTGCAGCGTCGGGAGAAGAGGCTGTGTCCGGGACAAGCGGGAAGGCGCGGAAAGAGATGGTGAGTCATCCCGCGACGCCGCAGAGCACCGCACCCTCGCCAGGGAGTGCGAGCGCCAACTCCGTGCACGAAGACTACGATGTCAACTCGAGCCCCACCAGCTGGCCGCGCACCCCCAACAGCCCGgtatttaaCAGCCACGTTCCCTCTGACACCTACAGATCCGGCAAGCAGCCTGACAGTCTGAGCAAGCTGTACGAGATGGACGATGCTCCGGAGAGGCGGCACTGGCTCGACCGCCTCCTCGCCTTTATGGACGAGAGGCGGAACCCCATTACAGCCTGCCCTACCATCTCCAAGAACCCCCTCGACCTCTTCCGCCTCTATCTCTATGTCAAAGAACGAGGCGGCTTCATGGAGGTGACGAAAAACAAAACGTGGAAGGACATAGCCGGGTTGCTGGGCATTGGCGCGTCTTCGAGTGCTGCGTACACGCTAAGAAAGCACTACACCAAGAACCTGTTGGCGTACGAATGCCATTTCGACAGAGGGGGAATCGACCCCCAGCCCATTATCAACCAGGTGGAGGCCCAGAGTAAGAAGAAGGGCAACAAAGTCATCTCTGTACCTTCCCCTGGTTCGTCGAACTCACAAGACTCTTTTCCGGCGGGAGGAAATAGCGGCAGTATGGATGGTTACCCCGGATATCCTGGGTATCCACCAGGTGGTGCCAATGCTGAATACCCAGGCTCCAACCAAAGGCCCTCCCAACCCACCCAACCATCTCCCATACCAGGTGGTATGCAACCAGGTGGGTACCCTGGGCAAGCGGGCTATCCTGGGCAGTACCCTGACTCGTATGGTCGAAGTGGGGAGTACAATCAGCAGTTCCCTCAGCAAGGCTACCCACCCTCCAGGCCTGGTCCCATGTACCCTCAGTACCCCCCTTCCGGGCCGCCCGCAGGGCCGCAGGAAGGGGATGCGAGGAACTACCCTCAAGGTGGAGCCGGAACACCGCCTGGTCCAGGAGGGCCTGCCCCAGCAACGGGAGGCCCGCCCGCCCCCGCGGGCGCCGCGCCGCAGGACCAGTACAGAAACTACCCCGGCAACTACTCTGGGCCACGCCCGGGCTACCCCACACCTGCGGGCGCCAGCCCCAACGCACCCGcgcccggggcttaccccccGGGCCAGCCTCCGCAACAAGACTATTACCGACAGGAACAGGTGGCCTATGCGGCGCAGGGCGGTTGTTACCCTCAGGCCGGTCCGTATGCTAGcggtagcagtagcagtagcgcAAGCGGTAGTTACCCCAACTCGCAGCTAGCGAGGCAGCTCGTGGCGCCGCAGCAAgcaTACGGAACAAATGGCAGCACGGGTAGCGGGGCAGCGGGAGCGACTCCTCAGCCTCCCGGAGGCGCCAGCCCTGCCGGGAAAACCATGACCACGATGACGATGCCCCCACCCGCACCCCAGCCCCGCAGACATCCTGACTTCTCCAAAGAACAACAGCCCTACCAGGGCTACCCTGGGCCACGCCCCGGTTATGGCCCGTGGCCTAATAGCCAGTTCCGGCAGCAATACCCGCAGCAGTGGCAGGGTGGCCCACGCTACCCCACGTCACAGGCGCCCCCTAACTCCTACCCTCCCCCACAGCCCATGCAGTCCTGGGGCAACTCTATGCCTGTACCCGGCGTCGGTCAGAGCTCGCCGCTACGACCCGCGGGGCCTCGGCCCCCTTTCAGGCCGCAATGTCCCCAGGCCCCGCCTAATAAGAGCTCAAGTCTGCCGCCGGGTGTGGCGGGATCGAAGCGGGAGCTGCAGTTCCCTGCAGAGTGCGTCGAGTCCGTGTCACCCGTGCTTTACAAGCGCCGCCGCCTCAACAAGCTGGACGTGGCTCCGCTGGAGGCTTGGCGGGTCATGATGGCCCTCAGGTCTGGCCTGCTGGCCGAGACTACGTGGGCTATAGACATCCTCAACATACTCCTCTTCGACGACTCCTCCGTCGCCTACTTTGGACTGAACCATATGCCCGGCCTACTTGAGGTGCTGTTGGAACATTGGCGCAAGACACTCGACGATGTGTTCGAGCAAATACCCGAGCAGAAAGCACCAAGTATAGTGGACCTCGGGGAGCCAACGCCAGAGCCGGGTGAGACGACGCGTGTGCTACCGGGCGTACCCGACAGAACTCTCGAACCTGTCAGAGGACGGCCTGTGGTTGTGGAGCCGCGGAGTGACCTTTTCGTTAAAGACGGGAGGAGAAATTGGGACGTGGACGACGACAGTGAGCCGCCAGACCCCGCGGCCCATATCATTTCGCCATACAGTGGCGAGTTTGTCCATCTACCTTTCGCCCGTCGTCTCCCAGACGGGAAGATCTTCAAGACTGAGCCTAGTGAGCGGACTGAGCCGGTACGCCTCCCCATTCGGCGTCGTAAAGACTCGCATTGTGAGGACGAGTGCTACTCGCGTGACGAGAGCAGTCTACTGCTTGCAACCGAGGCACAGGACAGCCTGGCGCGTCGCTGCGTCTGTCTGTCGACAATATTGCGTAATCTGAGCTTCGTGCCCGGCAACGAGGCGGAGATGGCGCGGTCTGTAGTACTGCTGGGGCTGCTAGGCCGTCTGCTGCTTCTACACCATGACCATCCGCCGCGCGTCACGCAAGCGCGCAACTACGACCGCGAGGAAGACGCTGACTTCTCCGACTCTTGCTCTAGCTTACAGGGGGAAAGTGAGTGGTGGTGGGACTATTTACACCACATACGGGAGAATGTGTTGGTTACTTGTGCGAATGTGGCCGGGCACATGGACCTGAGTTTGCACCCCGAGGAGTTGTCCAGGCCTCTGCTAGACGGTCTGCTGCATTGGGCAGTGTGCCCCGCTGCTGCCGGCCAGGACGCTTTCCCTACAGTGGGGCAGAACTCGGTGCTGTCGCCTCAGCGGTTGGCGCTTGAGGCACTGTGCAAACTCTGCGTCACGGATGGCAATGTCGATCTCTTGGTCGCCACGCCGCCTTACTCTCGCCTCGAGCGCCTTTGCGGTGTCCTCTCGAGGTTACTTTGCCGCGGCGAGGATCAGGTGCTTCGGGAAATGTCTGTAAATCTTCTGCACTACCTCTCATCGGCGGACTCGTGTATGGCTCGGACAATAGCCCTGCAGCCTCCTAGCGTGTCGTTGCTGCTGTCCTTCGTAGAACAGGCGGAGCAGAGCGCGCTGGGTGTCGCCAACCAGCTAGGCATCAACGCATTGCGCGACAACCCCGAGTCGATGGGTACCAGTCTAGACATGCTGCGGCGCGCGGCGGGCACACTGCTTCACCTCGCGAGGCACCCCGACAACAGGCCGCTGTTTGTGCAGCACGAGCCGCGCCTCCTGCAGCTCGTCATGAGCCAGATCTTGGACCAGCAGGTGGCCTGTGTCCTGGCGCGTGTACTCTTCCAGGTCTCCCGACCCGCCGCCGTCTCCTAG
Protein Sequence
MIRPTKVPRSRSPDPTELSGANSNDSNSGHAGPATPNSGMRPTPSPTGSTGSRSMSPAVGQQNIPMPPRPSSGQSEAPPPRLSHSPLTSGGGYPQHPQHPQHQYKQPPYPQPNYSPRPGPGAPYSPAPAGYPQQPNSQYPSRPHQPVTNHTQYPGYQTWGPQQPAPGQMMANHVPPNGKAGGAPPSQAPPSPSQPPANAVGPRPHTPPLYLKQHLQHKMGFSGPPPPQGQGGYPGQGMGPPGGMHHPMGPPPPSGMHHPGMGPPPPQNMGPPHEMPPPPSSTPNSHPLAAHMEEAHDNGITTTAGGGGSATHVSPASLGSVTSVVTTGPDGQPMDEGSQQSTLSNASAASGEEAVSGTSGKARKEMVSHPATPQSTAPSPGSASANSVHEDYDVNSSPTSWPRTPNSPVFNSHVPSDTYRSGKQPDSLSKLYEMDDAPERRHWLDRLLAFMDERRNPITACPTISKNPLDLFRLYLYVKERGGFMEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEAQSKKKGNKVISVPSPGSSNSQDSFPAGGNSGSMDGYPGYPGYPPGGANAEYPGSNQRPSQPTQPSPIPGGMQPGGYPGQAGYPGQYPDSYGRSGEYNQQFPQQGYPPSRPGPMYPQYPPSGPPAGPQEGDARNYPQGGAGTPPGPGGPAPATGGPPAPAGAAPQDQYRNYPGNYSGPRPGYPTPAGASPNAPAPGAYPPGQPPQQDYYRQEQVAYAAQGGCYPQAGPYASGSSSSSASGSYPNSQLARQLVAPQQAYGTNGSTGSGAAGATPQPPGGASPAGKTMTTMTMPPPAPQPRRHPDFSKEQQPYQGYPGPRPGYGPWPNSQFRQQYPQQWQGGPRYPTSQAPPNSYPPPQPMQSWGNSMPVPGVGQSSPLRPAGPRPPFRPQCPQAPPNKSSSLPPGVAGSKRELQFPAECVESVSPVLYKRRRLNKLDVAPLEAWRVMMALRSGLLAETTWAIDILNILLFDDSSVAYFGLNHMPGLLEVLLEHWRKTLDDVFEQIPEQKAPSIVDLGEPTPEPGETTRVLPGVPDRTLEPVRGRPVVVEPRSDLFVKDGRRNWDVDDDSEPPDPAAHIISPYSGEFVHLPFARRLPDGKIFKTEPSERTEPVRLPIRRRKDSHCEDECYSRDESSLLLATEAQDSLARRCVCLSTILRNLSFVPGNEAEMARSVVLLGLLGRLLLLHHDHPPRVTQARNYDREEDADFSDSCSSLQGESEWWWDYLHHIRENVLVTCANVAGHMDLSLHPEELSRPLLDGLLHWAVCPAAAGQDAFPTVGQNSVLSPQRLALEALCKLCVTDGNVDLLVATPPYSRLERLCGVLSRLLCRGEDQVLREMSVNLLHYLSSADSCMARTIALQPPSVSLLLSFVEQAEQSALGVANQLGINALRDNPESMGTSLDMLRRAAGTLLHLARHPDNRPLFVQHEPRLLQLVMSQILDQQVACVLARVLFQVSRPAAVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-