Mwes030475.1
Basic Information
- Insect
- Merzomyia westermanni
- Gene Symbol
- nfxl1
- Assembly
- GCA_949987695.1
- Location
- OX465291.1:31347155-31351985[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1.6 4.5e+04 -3.8 2.1 15 19 170 174 169 174 0.82 2 18 0.09 2.6e+03 0.2 0.4 4 10 205 211 204 211 0.96 3 18 5.5e-09 0.00016 23.2 15.1 1 19 219 236 219 236 0.98 4 18 1.4 3.9e+04 -3.6 1.4 5 10 261 266 261 266 0.92 5 18 1.6e-06 0.047 15.4 15.1 1 19 272 291 272 291 0.96 6 18 0.9 2.6e+04 -3.0 0.5 6 10 316 320 315 320 0.91 7 18 2.9e-08 0.00084 20.9 12.4 1 19 326 344 326 344 0.99 8 18 4.4e-07 0.013 17.2 12.3 1 18 379 396 379 396 0.97 9 18 0.32 9.1e+03 -1.6 0.4 1 5 406 410 406 415 0.75 10 18 2 5.8e+04 -5.0 2.3 5 10 420 425 420 425 0.91 11 18 0.0011 33 6.3 15.0 1 18 431 449 431 450 0.93 12 18 6.8e-08 0.002 19.8 15.3 1 18 459 476 453 477 0.86 13 18 0.006 1.7e+02 3.9 6.1 9 18 522 531 520 532 0.89 14 18 0.059 1.7e+03 0.8 5.7 3 11 545 553 535 554 0.85 15 18 0.35 1e+04 -1.7 1.2 6 10 615 619 614 619 0.85 16 18 1.8e-06 0.052 15.2 6.1 1 12 625 636 625 636 0.97 17 18 0.0021 62 5.4 17.5 4 18 666 680 664 681 0.93 18 18 0.0001 3 9.6 16.4 1 16 736 750 736 756 0.92
Sequence Information
- Coding Sequence
- atgtctGCACATTctacaaaagaagaaaaaacttcCGTCGAGGCCactcaacaaaaatcaattggCGTAAAACGTTTTGAGCAATCTCATGCTAAGCACATTGCTGCTGCGCAAAAAGTGCTTCAGCTATATACGCTTAGCTCTGACGAAGAAGAAGAGGATTTGGATGAAGGAACAATTTTGGATTCTCTTTACAAACATTATAAACCCGAAGCCAATAAGGGTGCAACTTCAGCGACCTTGCCACAAAAGAATGCAACTTTCTTTGAAAATGCTTTACATTCAGGATCAGCAACTTGTCTTATTTGCATAGGTAGTATAAGGCGAGTAGAAGCGATATGGGCCTGCAAATATTGctactgttttttccatctcaaCTGCATACAACGGTGGGCTAAAGATAGTGTTGCACAATTAAAAGCAAACTCTCATCATGATGAGCAGGGCTATTACAACAATTTGGGGGAATTCGTCCCTCCGAAACGCAAGCGAGCGTTACAATGGAGTTGCCCACAATGTCGGAAAAATTACACACCTGAAGAGAGGCCTGTGGAGTATAAGTGTTTTTGTGGCAAAGAGACAAATCCACAATCAACACCATTTCTATTACCACATTCGTGTGGAGAGTTGTGTGGAAAATTGTTACAACCAACATGTGGTCATACTTGCATGCTGCTCTGTCATCCGGGACCTTGTCCACCTTGTTCACAATATGCCAATACAAGGTGTTTGTGCGGTAAATCGGCAAAGAAATCTGTGCGTTGTATAGATAAAGAGTGGAAATGCAATAGAAAGtgtaATGAATATCTTCGATGTGGCGAACATAAATGCCAAGAATTGTGCCATAAGCCAAAAGAATGTCCACCATGTAGTAGTGCTAGTATGAAGGCATGTGAATGTGGAAGTGAGGTGAAAAAACGTAATTGTTCTGAACTGAAATGGCATTGTAATAAGgtATGCGGTTCTAAATATTCGTGTGGTTCACACAATTGTAAACGTATATGTCACTTTGGACCTTGTGGCGATTGTCCGTTGAGCTTGCCACGTTCCTGCCCATGTGGAAAAACTCAAAAAGTTGTGCCCTGTACTGAAGCTATTGACCCCTGCGGCGAAACATGCCAAAAACGTTTAACCTGTGGACTACATACTTGCACTCAACGTTGTCATCGAGGTGAATGCAATTTgTGCATAATCATAACCAAAAAGAAATGTCGCTGTGGCATGCATGAAAAAGAATTGCCTTGTTGGAAAAATTTCACATGCGAAACCAAATGCAAGCATATTCGTGATTGTGGAAAACATGCCTGCAATAAAAagtgCTGTGACGGCCGCACATGCCCGCAGTGTGATAAAGTGTGTGGCAAGCCACTGAATTGTCAAAAGCACAAATGTCAATCGATTTGTCATGAAGGTCCATGTTATCCATGCAATCAGCAATCACAGGTAAATTGTCGTTGTGGAAAAACATCAAAACGTGTGCCATGTGGACGTGAACGTACAGCACGTGTTATGTGCATGGAATTATGCCGTATTCCTTCAAAATGCCACCATCCAAACAAACATCGTTGTCACAAAAACGAATGCCCACCGTGCAATGAAAAATGCGGAAAACCAAATAGTACCACTCGTTGTGAACATATTTGTGAAGCTAAATGTCACGCCGCTGTTAAAGTTCCTAAACAAAATCCTACAAATGGCCAACATGCCAATGTGTGGGATGTAAGTAAAAAGTTTGAATTCAAAGCATTACCACATCCTCCATGTGAACAAAAAGTGAGCGTTACATGCATTGGTGGTCATGAAGTGGCCGATTGGCCCTGTTGGAATTCTAAGCCATCATCTTGCCAACGCCCATGTAACCGTTTATTACTTTGCGGTAATCACAAATGTGAGCTTGTATGCCATAGTGTGCCCGATATAAAGGATATGAAGGAGCAAATTGGTTGTGCTCAATGTCAACAGGGCTGCATTATACCCCGTCCTGAAGGTTGTTTACATCCTTGTTCACGGCCATGTCACCCACCACCATGTCAACCCTGcgataaattaatcaaaacaaaatgttATTGTGGCTTGACGCAGGTCATTTACAAATGTTCCGAATATTTTTCCATAGAAAGTGGTTCTGACGCTACAACAGAGGATTTACATGCACGACAAGAACGCTTGAAAAGCTGCGGCAATCGCTGTCTCAAGAATTTCCCATGCGGCCATCGCTGTCATACTCCTTGCCATCCTGGCAAATGTCCCAATCCGGAATTGTGTCGCAAAAAAGTACGCATTTATTGTACATGCAAACGTTTGAAAATCGAAATACCTTGTGATCGACAACGATCCAGTGGTCAAACAACTATACCATGCGATGCAAATTGTGTTGAGACGCAAGCCAAGTTAGCGGAACAGCAAAGGCGTGAAGCCGAAAAATTACGGAAATCGGAAGAAGCTAAAAATCGCGCTGAAGTCGAACAATTCGAGAAGAGATTCAGTAAACGTAAATATAAAGAACGCAAAATTGTTGTGGAAACGACGAAAAAGCATATCAATTGGCAATTGATAAGCATTTATGGTGGAATTGTTGCAGCGATTGTATTTGCCATTGCGGTGGcattttatgcagaaaattaa
- Protein Sequence
- MSAHSTKEEKTSVEATQQKSIGVKRFEQSHAKHIAAAQKVLQLYTLSSDEEEEDLDEGTILDSLYKHYKPEANKGATSATLPQKNATFFENALHSGSATCLICIGSIRRVEAIWACKYCYCFFHLNCIQRWAKDSVAQLKANSHHDEQGYYNNLGEFVPPKRKRALQWSCPQCRKNYTPEERPVEYKCFCGKETNPQSTPFLLPHSCGELCGKLLQPTCGHTCMLLCHPGPCPPCSQYANTRCLCGKSAKKSVRCIDKEWKCNRKCNEYLRCGEHKCQELCHKPKECPPCSSASMKACECGSEVKKRNCSELKWHCNKVCGSKYSCGSHNCKRICHFGPCGDCPLSLPRSCPCGKTQKVVPCTEAIDPCGETCQKRLTCGLHTCTQRCHRGECNLCIIITKKKCRCGMHEKELPCWKNFTCETKCKHIRDCGKHACNKKCCDGRTCPQCDKVCGKPLNCQKHKCQSICHEGPCYPCNQQSQVNCRCGKTSKRVPCGRERTARVMCMELCRIPSKCHHPNKHRCHKNECPPCNEKCGKPNSTTRCEHICEAKCHAAVKVPKQNPTNGQHANVWDVSKKFEFKALPHPPCEQKVSVTCIGGHEVADWPCWNSKPSSCQRPCNRLLLCGNHKCELVCHSVPDIKDMKEQIGCAQCQQGCIIPRPEGCLHPCSRPCHPPPCQPCDKLIKTKCYCGLTQVIYKCSEYFSIESGSDATTEDLHARQERLKSCGNRCLKNFPCGHRCHTPCHPGKCPNPELCRKKVRIYCTCKRLKIEIPCDRQRSSGQTTIPCDANCVETQAKLAEQQRREAEKLRKSEEAKNRAEVEQFEKRFSKRKYKERKIVVETTKKHINWQLISIYGGIVAAIVFAIAVAFYAEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01358570;
- 90% Identity
- iTF_01358570;
- 80% Identity
- -