Basic Information

Insect: Merzomyia westermanni
Gene Symbol: -
Assembly: GCA_949987695.1
Location: OX465291.1:45187736-45195728[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.67 1.1e+02 5.1 0.9 2 23 267 289 266 289 0.94

2 8 0.017 2.8 10.2 0.7 2 20 1166 1184 1165 1188 0.93

3 8 1.1e-05 0.0018 20.2 2.7 1 23 1224 1246 1224 1246 0.98

4 8 0.0011 0.19 13.9 4.4 1 21 1300 1320 1300 1321 0.94

5 8 6.8e-05 0.011 17.7 0.6 2 23 1328 1349 1327 1349 0.97

6 8 0.01 1.7 10.9 2.9 1 23 1355 1377 1355 1377 0.99

7 8 0.11 19 7.6 1.5 1 23 1384 1407 1384 1407 0.95

8 8 0.17 28 7.0 0.8 1 23 1416 1438 1416 1438 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.67	1.1e+02	5.1	0.9	2	23	267	289	266	289	0.94
2	8	0.017	2.8	10.2	0.7	2	20	1166	1184	1165	1188	0.93
3	8	1.1e-05	0.0018	20.2	2.7	1	23	1224	1246	1224	1246	0.98
4	8	0.0011	0.19	13.9	4.4	1	21	1300	1320	1300	1321	0.94
5	8	6.8e-05	0.011	17.7	0.6	2	23	1328	1349	1327	1349	0.97
6	8	0.01	1.7	10.9	2.9	1	23	1355	1377	1355	1377	0.99
7	8	0.11	19	7.6	1.5	1	23	1384	1407	1384	1407	0.95
8	8	0.17	28	7.0	0.8	1	23	1416	1438	1416	1438	0.96

Sequence Information

Coding Sequence: ATGAACGAAGGAGTTATCTCCAACTATGAGAATTATTTTGGTGGTTCCGGTTTGCCACCTGATTTGGCTGCGGAAATGGCGATGACAACTTCAATACATGCCTCATTCGAAGCAGATTATCAGCTTAAAGAAGCATCATCCCAACAGATGCATCATCAAAATTCACGCCGTTTCCATCATCATCATTCAACAAACTTAAATAGTTCCTTCGTATCTCCAAGTGATGTTACATTACAAACAGTAAATAATGCCACGCAAATGAATTATAATAGTGCCGTATCGAATACTGGTCATGGTGTTCCTGGAAACGTATTTACACAAATTCCTTTCGTACAAATTCATACGACCGACGTGCAACCACAGAGTGCATTTAATAGCACACGATTTCGACGAAATGCTACTAATAACCATGAGATAAAAGCAGAACCTATAAAGTCGGAAAATGCAGAAACTGCTAAAGATCGCATAAATGCAACACCTACACCACCAGCAGCCACTACAGCCCAACAGCGTAATGATAGCACCACATCAAAAAATTCCATTCAAGATGCAAATACTACGCATAATAAAGATTTGGATTTAAATGGGAATGGGAGTGAAGTAGTGGCAAATGTGGGAAGTAGTGATAATATGCCAGCCTCTACTCCCGACGACAATGCATTTGTGTTTCCAAATATTCATAGATGTCAATACTGTGCTTTCGTTAGTTTAAATGAGAATGGCTTGCAGAACCATTTAGAGGTGATACATCAAGAAACGTTTAACGTGTGTGAAGATGTATTGAAACGGATCTCAATTCATTGTCCTGgttgCAATAACATATGCTACACTTTAACAAGTGTTGAAGTTCATTTGCGTGAAGATCATCTGATGTGTGAACAGGATTTGGGAGTACTAATGCATGCCATCAAAAAGAAGAATCAAGTTCCTGAAAATTCGACACCTCTTAGCAAAACCGTTAAATCTACAGAGCAAATTGTGCCGAATGAGAACTCCATTAATGGAACGCAAAGACGTAGTAGaatctatttaaaaaatgttgagtGTTTGCGGGAACCGCATAGAGATCCAATCGAACAGCAAGATAATTTAATTACTGAAAGTCTATTTCACTTCGAAAATGATGATTGTAATACATTAGTAAATATTGGTAGCATAAGTATGGAAGATCAGGATCTGATAGGTATTCTTACTAGCGACGATACTACATTTCacagcaacaataataacagAAGCGACAATAATATTGATAATATTGTTAATGAAACTTTAACAACAACGATAGAAATAAATAagccaacaacaaccacacaacccaaacaaaaaatatcaataaaaagtgtAGATGTACTATGCGAACCCGCTCTCATACGACGCGATTATGAGATGCAGACATTTGGAGATTTCATAAATGTTTGTAGCGATTTAAATTTACACGTTACAAACAATAATCAGAACTGCAACAACAATGAAACAAGCAATTGTGAAACTGATAGTACGAGGAGTGCCACTGCTGCTGATGGTCAATATCTTTATACGAATAGAGATCAACTGCTTGATAATGCTGACGATGCTGGAATGGCGAATTTTGAACAAGGCTATGAAAAAGCTAGAAAacctaaaatttatattaaaaatgttgataTACTGAAAGAACCGATGACGTTTTCTAGTACGTTAAATGCGTCCAACATGACTGAGTCTTCCCCCAATAATGTAATGAATTTCAATTTCATTCCCCAAACACTAACACAAAACGTTTCCAACTATCTGGACACTCACCTGGAAAGCTTGAATGCAACAGTGCCGACATTTAATGGCGGTAATTGTGGTGGAGCTGGTGGGGTTGGTGTTGGCATGTCACAACTACCACTTGGCACTATATCAGATCAATACCTTTTTGATAGTGGTGcgagtaattttttgaataattcaacCACACCTACCACAGCAAATTATGCCTACGGCAATGAAACCAATTCGGATGGGTATTTAATGGATACGAATCGGTTTACCGATACAATAACACCAATTATAACCGAATCTACACCACCACCGCAATCATCAGCAGCGCCACAGCTACCAACGTCAACTATGGTGAACATTGGCGACAGTAGAAATTGTAATGTGAGCGATACGCCTACAACACCATTAACAActgtacagaaacaaaaaatattcattaaaaatgtGGATATACTCAAAGAGCCACAGTTTCAGCAGGAGCCCCGTGGCTTATTACATTTGCGTACAGTCGATGAATTGAATTTAATGAATCGAAAAGAAGTTGAAAATTTAATAGCACCTAACTTAGAGAGTAATCAAACAAATATGATTGAAGATGAACTTAGCGATAATTTTCAGCAATTGAATACCGCATTAACGGCTAATGATAATTGCAACGATAATGCACTCGAGCAAATTTCGTATGAGTGcgacaattttaaattaaacgaatttacaAATACACCAAATAGTTGGCATGATGATTATGATTTAGGCGAAGATATAAGGGACATTATAACTAGTACTATGACACCTACCTTGTCCACAGCAACACAAAAAGTTATACATGATTTAGATACACCACAAATGTCATTAATTTCTATACCAGACATAGAACTCACAGGTGCAAGAGTTCAAGTCAACATTGCATCCGAATCAGAAACTAATGAAGTGGAGGTACCAGCAGCAGTTACCACACAACAACAggataataccaattttactttcGAATGTGGGATTGTGGCGGCGGATAATGCTATGCAAGAATCAACAATTGGTAGTACTGAAAATGTGAGCAACTCTGCTATTTTTAACGCTGCTGCTGCTCTTAATGATGTTGAAAAAGACCATTGCGGAACACCTATAATTGCAAGCCCGTTAGAAACCGCTTCTCAGGAAGTTCTTAAACAAGAACGCTTGAATCAAACTACACCTCCGAGcgaacaaataaatacaaatacgaaTTTTGATAATCTTCCCCCTTTAACACCAATGACCGCCTCAACAACATACACTACAATGAAGAGCACAGTAGACGTGGTTTCTATATCAGCTGCACCAAATGGTTTGCCAGTGCCGCCACTTGTCCCAATCGCTAGCACTCTAACAGTTCCACCTGCCGAACGTGGACGCATTTATGTAGCAAACAATTTATTACAAACCCCAAGTGGTAACACCAGCACATCAAAGAAAACATCAACTGCAACACCGCCTAAATCCATTgatacaacaaatacaaaaaccagcAAAGAGCAAACCATAAATCCTATAGCTGTATCGGTCATGGGCGGTACATCGGTCCGTGGTCGTCCATTTGGCGCTAACCGTACTGGCCTTACAAAACAACGCAAACAAATATCGGGAAACAATAATAGTGCTGGTGTATATTTGAAATGTACGGTGGCTGGTTGTGCTTTTCGTTTTAAGAAATCCACCACAATCGATTATCACATTAAATGTCATACCAGTGAATCCTCACCACAATCAATGACATGCCCTGAATGCAAAGGCCCATTTACAAATTGGAATTCATTACATACACATTTGTGGCGTACGCATAAAATCGATATGGAACTATATAGTTGTCAACTATGTTCTTTTAAGACTCCCATCTATTCACGTCTACTAAATACACATTCCAAAATTCATTATGATGAACGTAACTATAAATGTGATCAATGTGAAAAGGCATTTAAAAATACCaaacaattgaaaaatcatCGTCGTTGGCATCGTAACCATAACAAAGCAACAGCAGCAAGGCAGGAATCCACGAAAACGGATGAAACCTCggcagctacttttgagagttCATCGATAACATCTACGCAAATTACAACAAATAAGACCACCACTACTACAGTACCTTTATCAGCGCCGACGCGCAGTTTTCATCGTTGCAAAGACTGCGATGCAGTTTTTTCACATCAGAAAACACTACGTGAGCATTTATGTAAGAATGTCTCTGCAGCTGTGCAATGTGAGGTTTGCGAACGTACACTGACATCACGTTCATCTCTAAAGTTACACATGCAATCACACGAACCGTCGCGTCGTTTCAAATGTAATGCCTGCGATTATGCCACAAGCGATCATAATGCGTTTCGGCGTCACAAGATGACTCACgataataatgcaaaaatgtatGCCTGCATGCATTGTGATTACAAGTCAATACAAAGTGTAGCATATCAGAAACATGTACAACAAAAACATCCACAATTCGCGGATTCCATTGTACACAGATGCAAAGTCTGTCCATACGCTACAATAAACAAAGCTTTATAcgatatacataaaataaaacatggaAATGCAAATACCAAAAATGAAATAGTTGTTGCTGAACCAACGATTACAACAACGGAGAGTATTGCAAGAGAAACAGAAAACAATTGCCACAATAAAGCGGCGCAAAACCCAACTGCCGACGTTGTTGTacaaaaaacaactaaaataaaagttaagagCCATTTATTGCTAACAACGCCTGCTGCTGATTCGATGATGGAATTCAATGATTTATGCTTCGATGCAATTACAATACCGGTgtag
Protein Sequence: MNEGVISNYENYFGGSGLPPDLAAEMAMTTSIHASFEADYQLKEASSQQMHHQNSRRFHHHHSTNLNSSFVSPSDVTLQTVNNATQMNYNSAVSNTGHGVPGNVFTQIPFVQIHTTDVQPQSAFNSTRFRRNATNNHEIKAEPIKSENAETAKDRINATPTPPAATTAQQRNDSTTSKNSIQDANTTHNKDLDLNGNGSEVVANVGSSDNMPASTPDDNAFVFPNIHRCQYCAFVSLNENGLQNHLEVIHQETFNVCEDVLKRISIHCPGCNNICYTLTSVEVHLREDHLMCEQDLGVLMHAIKKKNQVPENSTPLSKTVKSTEQIVPNENSINGTQRRSRIYLKNVECLREPHRDPIEQQDNLITESLFHFENDDCNTLVNIGSISMEDQDLIGILTSDDTTFHSNNNNRSDNNIDNIVNETLTTTIEINKPTTTTQPKQKISIKSVDVLCEPALIRRDYEMQTFGDFINVCSDLNLHVTNNNQNCNNNETSNCETDSTRSATAADGQYLYTNRDQLLDNADDAGMANFEQGYEKARKPKIYIKNVDILKEPMTFSSTLNASNMTESSPNNVMNFNFIPQTLTQNVSNYLDTHLESLNATVPTFNGGNCGGAGGVGVGMSQLPLGTISDQYLFDSGASNFLNNSTTPTTANYAYGNETNSDGYLMDTNRFTDTITPIITESTPPPQSSAAPQLPTSTMVNIGDSRNCNVSDTPTTPLTTVQKQKIFIKNVDILKEPQFQQEPRGLLHLRTVDELNLMNRKEVENLIAPNLESNQTNMIEDELSDNFQQLNTALTANDNCNDNALEQISYECDNFKLNEFTNTPNSWHDDYDLGEDIRDIITSTMTPTLSTATQKVIHDLDTPQMSLISIPDIELTGARVQVNIASESETNEVEVPAAVTTQQQDNTNFTFECGIVAADNAMQESTIGSTENVSNSAIFNAAAALNDVEKDHCGTPIIASPLETASQEVLKQERLNQTTPPSEQINTNTNFDNLPPLTPMTASTTYTTMKSTVDVVSISAAPNGLPVPPLVPIASTLTVPPAERGRIYVANNLLQTPSGNTSTSKKTSTATPPKSIDTTNTKTSKEQTINPIAVSVMGGTSVRGRPFGANRTGLTKQRKQISGNNNSAGVYLKCTVAGCAFRFKKSTTIDYHIKCHTSESSPQSMTCPECKGPFTNWNSLHTHLWRTHKIDMELYSCQLCSFKTPIYSRLLNTHSKIHYDERNYKCDQCEKAFKNTKQLKNHRRWHRNHNKATAARQESTKTDETSAATFESSSITSTQITTNKTTTTTVPLSAPTRSFHRCKDCDAVFSHQKTLREHLCKNVSAAVQCEVCERTLTSRSSLKLHMQSHEPSRRFKCNACDYATSDHNAFRRHKMTHDNNAKMYACMHCDYKSIQSVAYQKHVQQKHPQFADSIVHRCKVCPYATINKALYDIHKIKHGNANTKNEIVVAEPTITTTESIARETENNCHNKAAQNPTADVVVQKTTKIKVKSHLLLTTPAADSMMEFNDLCFDAITIPV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01358483;
90% Identity: -
80% Identity: -