Mwes047051.1
Basic Information
- Insect
- Merzomyia westermanni
- Gene Symbol
- ECU03_0790
- Assembly
- GCA_949987695.1
- Location
- OX465293.1:8314408-8337098[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.39 65 5.9 1.1 3 23 542 563 540 563 0.93 2 23 0.00035 0.058 15.5 1.7 1 23 570 592 570 592 0.99 3 23 0.18 30 6.9 4.7 1 23 624 646 624 646 0.97 4 23 0.00011 0.019 17.0 3.5 1 23 653 675 653 675 0.98 5 23 0.069 11 8.3 2.4 1 23 680 702 680 702 0.94 6 23 2.4 4e+02 3.4 1.4 1 22 708 729 708 731 0.84 7 23 0.18 30 6.9 1.9 3 23 737 758 736 758 0.98 8 23 0.0066 1.1 11.5 0.2 2 23 801 823 800 823 0.93 9 23 0.00025 0.041 15.9 3.0 1 23 1317 1339 1317 1339 0.99 10 23 1.2 1.9e+02 4.4 3.3 1 23 1350 1372 1350 1372 0.97 11 23 0.0011 0.18 13.9 0.9 1 23 1379 1401 1379 1401 0.99 12 23 0.044 7.4 8.9 0.6 1 23 1406 1428 1406 1428 0.97 13 23 0.93 1.5e+02 4.7 0.6 1 23 1434 1457 1434 1457 0.86 14 23 0.16 27 7.1 3.5 3 23 1463 1484 1463 1484 0.98 15 23 2.2 3.7e+02 3.5 0.5 2 23 1537 1559 1536 1559 0.89 16 23 2 3.3e+02 3.6 2.2 2 23 2006 2028 2006 2028 0.93 17 23 0.00057 0.095 14.8 4.1 1 23 2035 2057 2035 2057 0.99 18 23 0.7 1.2e+02 5.1 2.3 1 23 2073 2095 2073 2095 0.96 19 23 0.052 8.6 8.6 1.1 3 23 2104 2124 2102 2124 0.98 20 23 0.68 1.1e+02 5.1 0.5 1 23 2129 2151 2129 2151 0.97 21 23 2.3 3.9e+02 3.4 0.6 1 21 2157 2177 2157 2180 0.73 22 23 0.11 18 7.6 3.2 3 23 2186 2207 2185 2207 0.97 23 23 0.035 5.9 9.2 0.4 2 23 2255 2277 2254 2277 0.94
Sequence Information
- Coding Sequence
- ATGGAAACGGCATCAAACAATAGTCTCGGTCCACCGGACGCCACGGTTATTGATCCTTTAGTATATCCTACAACCAGCACATTTGCTTTGGATAAAAAATCCCTACTTAAATCTCCTAATCAAAATGTTGCACCTGTCCAACAGAAACAGCTACGTGAAAAAGTGCACATACAGGATGTTAAAACATTTCGAATTGGCTCAAATTTACTATCAGCAAAGCAAACTGCGCAATCGAGTGGGCATAGTGCTTTTCAGAAAATAGCGCAGGCAATTGAACAAATGCCAGTACCATATGTGGAAGAGGAATTTGCAGAGCAACACAGTTTACCAACAAATAACTCAACCGGAGTGAAGTCCACTCAACCATCGCTTTTACTCTCAAAACAATCTAATAAGCCATTAATTCTAAATTCTCAGAAATCATTTTTTGCACAGTCACCTAAACCCTTAAAACTTCCTATGCAAATTTCATGTTGGCAACCTGTTAAGAGTAAAGCTATTCAGAAACCATTTGCTCATTCAAACCCACATGCGCAACCCCCATCATCcaataattcaattttttcgcCTTCTGCTTTCAAATACTTAAAAACGAGAAACGTGGAACCAGAAGTATACGCAGAGGAGCAATTTGTAGAGTTTATAAATGAAGCTTTATATGATAATGAAGAATTGGCGAAGAAACAAGTTGTAACGGTTGATAACTCAGATGAGGACGAGCCTGCATTTGAAGAAAAACCAGTTGAATATTTGCTAGAAATCCGTAAAAACAACACCATTGCAATTCAAACTGAAGATGTCGTTGAAGATCGTATTAATTGCGGATttataaatgtttctaaaagCGGaaccattaaaatatttaatcttcGTTGCTTTTATTGCGATGCCGAATATCCAATAACATTTTGGTCTGAGTTTTCAGATCATGTCTTATACAATCATTTCGATTTGGAACAAGCTTATGTTAAAGACAACGAAACGGAGCATACGGAAGTGGACGATACCAAATCTATCGCAACTGAAATGGATGTGTTCCATGATCTCGAAACTGCAAGTTTTTTGAGTGATGACACAATACATGAGAAGTTCAAAGTAAAAAAGGCGGAAAGTTCAACAAATGTTACTGAGTGTAAACTTAAAGAGAAAGAGGTTTTGCCAGAGGACTTTGTCAACAATATTGAAGATGATGATTGGGAAAGCGAAAGTGATGCCGAGCAAAAATATATGCGCGTAGAGTGTTATGAACCACTTGAAGATCATAGCTACGGTTTGGACCGTCTTTATataaaTTTCACGAGTTCACCTCGTACAATTGTTCTGGATTTCTTGGATCATTTAAAAGGCTTCCCTAGTTTATGGCACGATCGTAAAAGATATTCTGAAAGTTATGACAATGAACTAAAAGTCTTATTAAGTGTAATGAAAGAGAAATGgcaattaaatttcacaaaGACAAGTTTGCGTAAAAACTTAGAATGTATAAAATCTTGGTACGGTAGTATAACCCTATTAAAGGATGAGAAAGGCGAACAATTCCATCAACACACTTATATCGAATACTATAACAAATGTGCAGAGTATCTCGAACAAGCAAATTCAAACAAACAACCTACAGTTAATTGTGATATATGCAATCAGGCTTGTTCCAATCGGATTGTGCTGCAAGTTCACAAATATCGTAGACACAATGTGGGACAATTGCCCTATAGTTGCAATACCTGTGACAAACGTTtcgattatatttataaattaattagtCATGTAAAAACACAcataaaaaaaccgaaaaataagaaaactgaAGAATATATAGATGTTAACGTACCACTTCCACCTACACCACCATTACCGCCACCACCTCTAAGCTTCGAATGTTAtgaatgcaataaaattttcacatgtGAGCACGAGTATAAAAGACATTTGGATATTCATCCGAAAGGACATTGCCGATATTGTTGTGATGAATGTGGACGTCGATTTAGAAGTACTGCACAACTAACTGTACATAAAAAGCGCCATCAACCGCCCGAATTTCAATGCCAGCTGTGTCCGAAAAAATTCTATACTATATTTAAGTTTAGAATGCATACAGATGGTCATAAGGGATTGAAAAATTATGTGTGTGAATTTTGTGGTCGCcaatttcttttacaaaaaGATTATGTGGCACATCGTCACTTTGCACATATGGGTTATGGACTTTGTAAAATTTGTAATCGTGAATATAAAAACTCGTTTATATTTTATAGGCACTTAAAGACACAGCATAGACCAATATTTGGTACAAACGAAGAGTTAAGTAAACGTCGTAAAAAGAAGGCAAAAGGTATTCCTAtcttaaaaaatagaaaatatgaacGTGTAATAGATCCTGTTACGCAAAAACAGCGCCTTAAATGCCCAATATGTGATGAAAGTTTTATGAGATATGAGACTGTATATAAACATGCAAAACAAGTACACAACTATGACGTGCCACGTTTGCAAAGACGGCAGCCGGAACGTAGAAAATTAACAAAGATATCAAAGAAACGTGTACGTGGGAAGAAAGCTAGAAATGTTTCTATTGATAAGAGCTCAGAAGAAGCTGCAGCAGCTGTTGATGCCATTCAAGAATTTTCAAGCATAAAAGTAGAAAATCATGATTCTAATAGTAATGAACCTGGCCCAAGCGCTAGCATGTCTGGATCCTTCTTCCAAGCTCCAAGTTGCGATACGCTACGAGAACAATGGTCGAAATCATGTCGGACGGAGCTGAAACCCAAATCTCTTATATGTTCTGATCACTTTGCAAGCTCGGATATGGTACTTTTAGGCCGAAAATACCGCCTCTTGTTCAAAGCTCTTCCATCAGCTCCAACACTAGTACCGAGTGCGAATATCGTTACTTCCGTGACTTCTGTTCAATCTATTTTGTCAAATAATGGCACGATTGGTTCCTTACCGGCTGCATCTAATTTACAAACAAATACCTCGCCACCAATTTACGTTTCTGCCACTTTACAAGAAGGAGATACAAAACAGGATGAACTgatAAATGAAGCTTTATTCGATAACGAGGAAAATGAGGAAGAACATAATGTCTCTATCGATGCCAGTAATAAAATCAATCCATTATCTACATCCATTGAAATCAAAACAGAAGATAATATACCTGAATATCCCACTAGTAAAAGTCTGCTAATAGCATCCAATATATTTCCCACTACAAAAGGCATTCAAACCGATGAAGCTGACAGCGCAACAGAAGAAGAACTACCACCAATAGACTTTATAAGtttagttaataataaaataaatgacacGAACCGAATTCCTTTGATAGAAGAGGTTAATGATTCTTCATTAAAAGACAGTGTACCGAATTATACGGATGTCAACCTTAGAAGTGAGCAATATATGCCATTACAACAGCAAGAGCAACCACAATATGTGtttgaaaagaaatatgaaCTTAATATTGAACATAACTACAGTCAAACACCTTTAAATAAATCACCGAATGATGTTATAAATAACGCTGATGAATTTATAGATGagATAACTTTTGATAATAGTCCACGAGATATgatatttgatttctttaataatataaaaggaTTGCCAAGTTTATGGCTTGACCGTAAATTACACCCTGCTAACTATGACAAAGAATTGCTAGATTTAATGgatttaatgaaaataagatGGAACCTCAATCTAAAAATAGATAATTTacgtaaaaatttggaaaatattaaaGATTGGTTCAACACGATGAGAGCAGCAAGGGAAATGAGTGGCGATAATAACGTTCAAGATAAATTCAGCGAATACTATGCTGTAtgtgaagaatttttaaataaacaaaataatcacTGTGATCGGTGCAAACATATTGCTATAAATGCAAGTCGATTGCAAGTGCATAAGTACAGTAAGCATAAAATAGGTCTACCGCCCTATAAATGCCATGAATGCAACAAATTATTCATTTATATCGATAATATGCTTAAACATATACGAAAACATGTCGAAAATAAAGAAACTGTACCAACAGATTTCAAATGCTTCGAATGCGATCAGAACTTTGTTTGTGCAAAAGAATACAAATTACATTTGGATAAACATCCAAAAGGCGATCGCCCATATGTCTGTGAGGAATGTGGTAATCGATTTAAAGATATAAGTAAACGAAACGAACATCAAAGGCGGCACAAATCAGCAGGATATCAATGCGAATTTTGTCCGCTAAAACTTACAACTGCGTTTGCTTTTAGAACTCATACGAATGCACATAAAGGTATTTACGAATACATTTGTGAGTGGTGTGGTCGTCCGTTCGTGTGTCGTAATAAATGGTGGGAACATGTTAAATATGAGCATATGGGACATGGCTGGTGTAAAATATGTAATCGTGAATATAAAAAGTCATCCATTCTGCATAAACATTTAAGAAACCTGCACAGACCACTAATCGGTACAATTGAAGAATTGACCAGTAGAAAACGTAGACGAGGCTCGAAAAAACCACGTGCGAAAGAAAAGTTTAAACGTAAAATGGACCCCAAATATAgaaaatacgagtatattatagATCCTGTGACACAAACTCGTCGCCTGAAATGTCCAATGTGTGATCTTAGCTATCTTCGTCATAGGAATGTCCTTTTGCATGCATTAAAAGTTCACAAAACTGATTTACGAACTATGGAGAGACCGACAAGGGAGAAAACGGCTAAACTAGTGAACACCGACAATCAAAGTAAGTGGAGAACAATCAAGTTGATTAAGGACATTACTCGTACTACGATCGTCGAAGAAGACGCACCAGCAGTAGCAGCTATTAATGTCCATAAAGATGGCGCTGGTATAGAGTTTGAAAATCTTAACTACAATTTTGAAGATGACAAAAATGCAACAGTTTCGAGTGCGAATATCGTTAATTCCGTGTCAGCTGTGCAACCTATTTTGTCAAATAATTTTGATCAGCTTGGcaCAAATATGGGTGCTGTGCTTAATACTAACCAGCAGTATCCGGTGTACATTTCCGCAACGATTGGTTCCTTGCCGGCTTCAtctaattttcaaacaaataccTCCAGACCAATTTATGTTACCACTACTTTGGCGGAAGCAGATACAAAGAAGGATGAATTgatAAATGAAGCTTTATTCGATAACGAGGAAAGTGCCGGTAATACAATGAATCCATTATCTACATCCATtgaaattaaaacagaaaataatacACCTGAATATCCCATTACCGAAAGTTTACTAAAAGCCTCCACTACATTTCCTACTACAACAGGCAGTCAAACCGACGAAGCtgATGGGTTTATGTCTACTACAAGTGATCATAACAAAGCTAATGATATTGATGAAATGGATGTTTCTAGTGATAGCGCAACAGAAGAAGAACTACCACTAATAGACTTTATAAGtttagttaataataaaataaatgatacaAACCGCATTCCTTTGATAGAAGAGGTTGATGATTCTTCATTAAAAGACAGTTTACCGAATGTCAACGTTAGAACTGAGCAATATATGCCATTTCAACAGCAAGAGCAACCACAATATGTGTTTCAAAAGAAATATGAGCTTAATATTGAACATAACTACAGTCAAACACCTTCAAATAAATCACCGAATGATGTTATAAATAACGCTGATGAATTTATAGATGagATAACTTTTGATAATAGTCCACGTGATATCATAATTGATTTCCTTAATAACATAAAAGGATTACCAAGTTTATGGCTTGACCGTAAATTACACCCTATTAACTATGACAGAGAATTGCTAGCTTTAATGGatataatgaaaataagatGGAACCTCAATCTAACCATAGATCATTTATGTAAAAATTgggaaaatataaaagtttggTTTAACACGATGAGAACAGCAAGAGAAATGAGTGGCGATAATAACGTTAAACCTACATTCAGCGAATACTATGATATATGTGAagaatttttaacttttgaaggaggaaataaacaaaataatcgcTGTGATCGGTGCAAACATATTGCTATAAATTCAAGTCAGTTGCAAGTACATAAATATAGTAAACATAAAATAGGTCTACCGCCCTATAAATGCCATAAATGCAACAAATTATTCATTTATATCGATAATATGCTTAAACATATACGAAAACATGTAGAAAATAAAGCTAATGAAGAAACTGCACCAACTGAAACAGATTTCAAATGCTTCGAATGCGATCAGAACTTTGTTTGTGCAAAAGAATACAAATTACATTTGGATATACATCCAAAAGGCGATCGCCCATATGGCTGTGAGGAATGTGGTAATCGATTTAAAGAGATAAGTAAACGAAACCAACATCAAAGGCGGCACAAATCAGCAGGATATCAATGCGAATTTTGTCCGGCAAAACTCACAACTGGGTTTGCTTTTAGAACTCATACGAATGCACATAAAGGTATTTACGAATACATTTGTGAGTGGTGTGGTCGACCGTTCGTGTGTCGTAATAGATGGTGGGAACATGTTAAATATGCGCATATGGGACATGGCTTGTGTAAAATATGTAATCGTGAATATAAAAAGTCATCCATTCTGCATAAACATTTGAGGAACATGCACAGACCATTAATTGGCACAATCGAAGAACTGGCCAGTATTGAAGGTAGACGACGTGCGAAAGGCAAGTTGAAACGTAAAATGGACCCCAAATATAGAAAATACGAGCATATTATAGATCCTGTGACACAAACTCGTCGCCTGAAATGTCCAATGTGTGATCTTAGTTATCCTCGGCATAGAAATGTCCTCATGCATGCATTAAAAGTTCACAATTTCGATTTACGAACTATGAAGAGACCGAAAAAGGAGAAAACGGCAAAATTATCGAACAACGACGATAAAAGTAGATGGAAAACAATCAAGTTGATTAAGGACACTGCTTCTACTACGAGCGTCGTAAAAGACGCACCAACAGCAGAGATTAATGTCGACATAGATAGCGGTGGTATAGAATTTGAAACCCCTAACTACAGTTTTGAAGATGACAAAAATGCGACAGGTATTTCTTTTGAGAAGTTTCTTGGTGAAATCGTTCAAAGTAATAACTTTTCCTTGCAATCTCCAAGCACTATGTTAGGAATTGACGTACAATCAACGGAAAATTGGTGA
- Protein Sequence
- METASNNSLGPPDATVIDPLVYPTTSTFALDKKSLLKSPNQNVAPVQQKQLREKVHIQDVKTFRIGSNLLSAKQTAQSSGHSAFQKIAQAIEQMPVPYVEEEFAEQHSLPTNNSTGVKSTQPSLLLSKQSNKPLILNSQKSFFAQSPKPLKLPMQISCWQPVKSKAIQKPFAHSNPHAQPPSSNNSIFSPSAFKYLKTRNVEPEVYAEEQFVEFINEALYDNEELAKKQVVTVDNSDEDEPAFEEKPVEYLLEIRKNNTIAIQTEDVVEDRINCGFINVSKSGTIKIFNLRCFYCDAEYPITFWSEFSDHVLYNHFDLEQAYVKDNETEHTEVDDTKSIATEMDVFHDLETASFLSDDTIHEKFKVKKAESSTNVTECKLKEKEVLPEDFVNNIEDDDWESESDAEQKYMRVECYEPLEDHSYGLDRLYINFTSSPRTIVLDFLDHLKGFPSLWHDRKRYSESYDNELKVLLSVMKEKWQLNFTKTSLRKNLECIKSWYGSITLLKDEKGEQFHQHTYIEYYNKCAEYLEQANSNKQPTVNCDICNQACSNRIVLQVHKYRRHNVGQLPYSCNTCDKRFDYIYKLISHVKTHIKKPKNKKTEEYIDVNVPLPPTPPLPPPPLSFECYECNKIFTCEHEYKRHLDIHPKGHCRYCCDECGRRFRSTAQLTVHKKRHQPPEFQCQLCPKKFYTIFKFRMHTDGHKGLKNYVCEFCGRQFLLQKDYVAHRHFAHMGYGLCKICNREYKNSFIFYRHLKTQHRPIFGTNEELSKRRKKKAKGIPILKNRKYERVIDPVTQKQRLKCPICDESFMRYETVYKHAKQVHNYDVPRLQRRQPERRKLTKISKKRVRGKKARNVSIDKSSEEAAAAVDAIQEFSSIKVENHDSNSNEPGPSASMSGSFFQAPSCDTLREQWSKSCRTELKPKSLICSDHFASSDMVLLGRKYRLLFKALPSAPTLVPSANIVTSVTSVQSILSNNGTIGSLPAASNLQTNTSPPIYVSATLQEGDTKQDELINEALFDNEENEEEHNVSIDASNKINPLSTSIEIKTEDNIPEYPTSKSLLIASNIFPTTKGIQTDEADSATEEELPPIDFISLVNNKINDTNRIPLIEEVNDSSLKDSVPNYTDVNLRSEQYMPLQQQEQPQYVFEKKYELNIEHNYSQTPLNKSPNDVINNADEFIDEITFDNSPRDMIFDFFNNIKGLPSLWLDRKLHPANYDKELLDLMDLMKIRWNLNLKIDNLRKNLENIKDWFNTMRAAREMSGDNNVQDKFSEYYAVCEEFLNKQNNHCDRCKHIAINASRLQVHKYSKHKIGLPPYKCHECNKLFIYIDNMLKHIRKHVENKETVPTDFKCFECDQNFVCAKEYKLHLDKHPKGDRPYVCEECGNRFKDISKRNEHQRRHKSAGYQCEFCPLKLTTAFAFRTHTNAHKGIYEYICEWCGRPFVCRNKWWEHVKYEHMGHGWCKICNREYKKSSILHKHLRNLHRPLIGTIEELTSRKRRRGSKKPRAKEKFKRKMDPKYRKYEYIIDPVTQTRRLKCPMCDLSYLRHRNVLLHALKVHKTDLRTMERPTREKTAKLVNTDNQSKWRTIKLIKDITRTTIVEEDAPAVAAINVHKDGAGIEFENLNYNFEDDKNATVSSANIVNSVSAVQPILSNNFDQLGTNMGAVLNTNQQYPVYISATIGSLPASSNFQTNTSRPIYVTTTLAEADTKKDELINEALFDNEESAGNTMNPLSTSIEIKTENNTPEYPITESLLKASTTFPTTTGSQTDEADGFMSTTSDHNKANDIDEMDVSSDSATEEELPLIDFISLVNNKINDTNRIPLIEEVDDSSLKDSLPNVNVRTEQYMPFQQQEQPQYVFQKKYELNIEHNYSQTPSNKSPNDVINNADEFIDEITFDNSPRDIIIDFLNNIKGLPSLWLDRKLHPINYDRELLALMDIMKIRWNLNLTIDHLCKNWENIKVWFNTMRTAREMSGDNNVKPTFSEYYDICEEFLTFEGGNKQNNRCDRCKHIAINSSQLQVHKYSKHKIGLPPYKCHKCNKLFIYIDNMLKHIRKHVENKANEETAPTETDFKCFECDQNFVCAKEYKLHLDIHPKGDRPYGCEECGNRFKEISKRNQHQRRHKSAGYQCEFCPAKLTTGFAFRTHTNAHKGIYEYICEWCGRPFVCRNRWWEHVKYAHMGHGLCKICNREYKKSSILHKHLRNMHRPLIGTIEELASIEGRRRAKGKLKRKMDPKYRKYEHIIDPVTQTRRLKCPMCDLSYPRHRNVLMHALKVHNFDLRTMKRPKKEKTAKLSNNDDKSRWKTIKLIKDTASTTSVVKDAPTAEINVDIDSGGIEFETPNYSFEDDKNATGISFEKFLGEIVQSNNFSLQSPSTMLGIDVQSTENW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -