Basic Information

Gene Symbol
zfy1
Assembly
GCA_949987695.1
Location
OX465291.1:5206904-5208763[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.0055 0.91 11.7 1.2 1 23 198 220 198 220 0.96
2 10 0.26 43 6.4 1.0 3 22 259 278 257 281 0.82
3 10 0.25 41 6.5 0.3 1 23 288 316 288 316 0.90
4 10 0.037 6.2 9.1 4.6 1 23 394 417 394 417 0.91
5 10 0.0013 0.21 13.7 1.8 2 23 423 444 422 444 0.96
6 10 0.00037 0.062 15.4 0.4 2 23 460 481 459 481 0.97
7 10 0.00038 0.064 15.3 3.1 1 23 490 513 490 513 0.96
8 10 1.5e-05 0.0025 19.8 1.6 1 23 519 542 519 542 0.95
9 10 0.00011 0.018 17.1 8.6 1 23 548 570 548 570 0.97
10 10 0.032 5.3 9.3 2.4 1 23 576 599 576 599 0.97

Sequence Information

Coding Sequence
ATGTCAACTGAATGGGCCTTGATTCTGTCAGCCAATTTACATATGCAGCGAACATGCCTGAGGATGAATTATTTAcaaacagaaaatattttaatggaaatattCAAGGAGcagaaaacaattaccaaatttatGGACACaatattccaatttttgttgagacGCACAAATTTCCGCTTAGTGGATGCTTCAAAGAGAACCAGGCTTTGGCAGGTGTTCTTGGATGAGTTGTCACCTTATGACGCGGAGCCGCAAACAAAATCACAAAATATTGCTTCAGATATCGCTCCAACGGAAATTGAAAATGAGACTGAATCCGACAATGTTGATTTGGATGTGACCATACCAATACCAATTATCGACGTAACTACGAAAGTGCAAATAGTTCCTACTGCAAATCAAGTATTTGATTCGACAAAGTTTGATATACAACCTGAGGCTTTCCAAAATCGCTTTAATACAGATCACCTTCAAAGTTTaaagaatttaagaaaaatattgccCAAAGCGAAGCAATCAATTCAATGTCATACTGCAGTGAAACAAccagattttaaaaattgtattgcaaAGCGAATTAAAAAGCGTTTATACAAATGTAGTGAATGCACTCAATTGTTTGTTTCTTTTCGACAGCTCAAAGTGCACGAATCTCTACACATATCCCAAGTAGATGATGGCATAAACGTTTGTACTTTTTGTTGCAGTTTGTACGCCAATTCAGAAACattagaaaaacatttaaacgAATGTCATGGAAATGGCCGGTACCTATGCGTACCGTGTGCAAAAACTTACAAGAGCCGTGGGCAGTTGCTCAAGCATGTACATTCCAATACACACAATGCCAATGCAATGTTATATTATTGCAGCCTATGCCCCCGagcagaaaaatatatagaattcaCTTCCAGAACTGCATTACAACAACATTATCAAGAAATGCATTTACTTATGCCAGTTAGTCAGGATGAAGATGATGTGGAAATCGAAATGAATGAAGAATTTCTCGatgaatttcttttaaataatgttaatgagaattcttttaatttttctgaatgttGGGATGCATTAGATTTAAACCTACCAGATATGTTACGCTTGACAAACACCGATGACGACGGTGCTCCTTCAAATGctgataaaataaattcaagtcaaggAAATGATTCACTGTTCAAATGTCCAATGTGCAACGAGGGGTGTTCAAAACAGAAGACACTTTTACAACATTTTGCTCACAAGCATGGACTACCGAcgttaatttgtaaaaaatgtgaTGCTAGTTTTACAGATTATACACAATGGATACATCATAAAAGTACTCATCGTACTCAATTTGATGCGGACCCAAATGCTAAGAAGAGCCTTCTACAATGTGGGATATGTGATAAAATCCTTAAAAGCAATGCATCATTCAATTATCATGTTAAAACACATGTACGAAGCGTTTTGCAAGCTCCACATGAGTGTCCATATTGCCGAAAACATTTCAATTCTGATACTAATATGAAACAACATATACTTATCGTACATTCTCATACTAAGCGACACATTTGTGAGCTTTGTGATAAACCGTTTGCAACACTCGATCACCTGAAAAAGCATGTGCTGAGCCAACATCAAAATGAACGGAAACACATATGCCATGTTTGCGATAAATCCTTTACACAATTGTGCCACCTCAAACAGCATCTGAACATCCACACTACAGGAAAACCACATCAATGTGTGAAATGTGAAGGCAAGTTTTGGCGTAAAATTGACTTGCGTCGTCATATGCTAAAACGACATGAATGA
Protein Sequence
MSTEWALILSANLHMQRTCLRMNYLQTENILMEIFKEQKTITKFMDTIFQFLLRRTNFRLVDASKRTRLWQVFLDELSPYDAEPQTKSQNIASDIAPTEIENETESDNVDLDVTIPIPIIDVTTKVQIVPTANQVFDSTKFDIQPEAFQNRFNTDHLQSLKNLRKILPKAKQSIQCHTAVKQPDFKNCIAKRIKKRLYKCSECTQLFVSFRQLKVHESLHISQVDDGINVCTFCCSLYANSETLEKHLNECHGNGRYLCVPCAKTYKSRGQLLKHVHSNTHNANAMLYYCSLCPRAEKYIEFTSRTALQQHYQEMHLLMPVSQDEDDVEIEMNEEFLDEFLLNNVNENSFNFSECWDALDLNLPDMLRLTNTDDDGAPSNADKINSSQGNDSLFKCPMCNEGCSKQKTLLQHFAHKHGLPTLICKKCDASFTDYTQWIHHKSTHRTQFDADPNAKKSLLQCGICDKILKSNASFNYHVKTHVRSVLQAPHECPYCRKHFNSDTNMKQHILIVHSHTKRHICELCDKPFATLDHLKKHVLSQHQNERKHICHVCDKSFTQLCHLKQHLNIHTTGKPHQCVKCEGKFWRKIDLRRHMLKRHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
-
80% Identity
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