Mwes028992.1
Basic Information
- Insect
- Merzomyia westermanni
- Gene Symbol
- zfy1
- Assembly
- GCA_949987695.1
- Location
- OX465290.1:153391188-153393688[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.0026 0.44 12.7 9.7 1 23 243 265 243 265 0.97 2 11 0.00028 0.046 15.8 2.8 1 23 287 309 287 309 0.98 3 11 2.6e-05 0.0043 19.0 4.1 1 23 320 343 320 343 0.96 4 11 2.2e-05 0.0037 19.2 3.0 2 23 362 384 361 384 0.95 5 11 1.3e-07 2.1e-05 26.3 1.6 2 23 395 416 395 416 0.97 6 11 1.1e-05 0.0019 20.2 0.1 1 23 422 444 422 444 0.96 7 11 0.074 12 8.2 4.0 1 23 450 472 450 472 0.95 8 11 3e-05 0.0049 18.8 1.0 1 23 478 500 478 500 0.97 9 11 1.7e-05 0.0029 19.6 6.5 1 23 506 528 506 528 0.97 10 11 0.00028 0.047 15.8 3.0 1 23 534 556 534 556 0.99 11 11 0.00012 0.02 16.9 0.7 1 23 562 584 562 584 0.98
Sequence Information
- Coding Sequence
- ATGCATACATTAAGTGAGACATCTTTTGCGAGTATGTGTCGGACTTGTATGAATGAAGTTGAAACATTTTCATACTTCGGTCACACGGAGCCACAATCGCGCTGGCAATCTATCTTCGACAAAATTGACGATTGTGGCGCTTTGAGCATTGCAGACTTAATATCCAAAGCAGTACCGCAAATAGAAGTGCAGCTGAATGATGAGTTTCCAAAGAAAATTTGCTGTAAATGCCTACATCGATTGGTAAGTGCGTACCGGTTCCAACAAATGTGCGTaaaatccgaaaaaaaaatgAGTGTACTGGTTTCTAAAATGCGGACTGATTTGAAGATGTCAACGATGGAGGGTGAAATCAGCATAAGCCATCTAGACTCAATCCTGTCTGAGGACTTTCTTCCCACCAGTACTCTTCACACTTTTCGGGAAGTACTTATACCTTTGCAACATCATTCAATACCAGAACCTGTTCGAGAAACTATTGAACAGGTATTTAAACCGGATGCAGCACAATCAAGTGAGGCTGATCCATTGCAAAACCAATTACTAGAAAATTGTAAGGTGCCACAAATTGATtgttttgaatttgttaaaaatgaacCAATTTATGATGGTGAACCGAGCATTCAATATAGCGATACTGACACAGTGCCTTCATCAGAAGCTGTAAAAAACAATGTACTAGTAGTGGAATCGGAGGATGAACAAATAAGCTTGGGCTCGTCCCAGCATATCTGTCATCTTTGTAATAAATCCTTTAAGGAACGCtgttatttaaaaaaccatCTGAAGCGTCATAACACCGGTGGTGAACAAATCAAAATGGAAGTTCAGCGCAATCAAAAGTTCGACTATTATCTCTTTAAATGTGATATTTGCAATCGTCGTTTTCATAAAGCGGAATCGCTCTATAATCATAGATTAGTACACGATGATAAGGTGGATAGTAAGATGTATTGGCATGCTTGCGATTTTTGTGGGAAAGCGTACAGTACGCGGCATACATTGGCGAGGCATTTAAGAAAACGGCATCCTACTGAAAAATCACAACAAAAGGATAAAAAGGATACTGAGAAACAAAGCCTAACTTGCGATTTGTGTGGAAAAATGTACAGTAAGCAACATAATTTAACAAACCACAAGAGGCTGCAGCATTCCACAGACAAACCAAAGCCAACACTAAATTCATGCAATTTCTGTGACAAGAGTTTTAGCGACTCGTCCGCTTTGAGGAAACATGTACGTACACACACACGCGAGCGGCCATACTTGTGTCCAGAGTGCGGCAAATCATTTGGGGCGGAAggCAATCTGAAACAGCATCTCTTACGTCATAGCGGCGATAAGCCTTACGAATGCCCCTACTGTCCTCAGAAGTTTAGTTGTCATCAGAATGTGTCCAAACACAAAATAATACACGAAGGTATCAAACGGCACGTTTGTGATATTTGCGGTAATAGCTTTGGAAAGTCTGATCAATTAAAACGACATAAACTTGTTCATAGCGCTGAAAAACCACATAATTGTGACTTTTGTGAGAAGCGATTTAATCGCATCGAACATCTGCGCCGTCATATGCGCACTCATACCGGTGAAAAGCCATATAAATGCAAATATTGCGATCGCGCCTATGCTCAAAGCAATGATCATATCAAACATTTACGTACTCATGTAGGTGATAAAGTTTATAGATGTGAATTGTGTCCGTTGACGTTCCGTTTAGCTTCCGAGTTACGGTCGCACTTTACTACGCATAAAAACGAAGATCCAACTACGCGTGACAGAAATATGAAAGCCTTGAAGGAAGAACAAgctaaattacaattaaaattagctGGAAAGGATATATTAACCGCTGATGTtgataaatttttacaataa
- Protein Sequence
- MHTLSETSFASMCRTCMNEVETFSYFGHTEPQSRWQSIFDKIDDCGALSIADLISKAVPQIEVQLNDEFPKKICCKCLHRLVSAYRFQQMCVKSEKKMSVLVSKMRTDLKMSTMEGEISISHLDSILSEDFLPTSTLHTFREVLIPLQHHSIPEPVRETIEQVFKPDAAQSSEADPLQNQLLENCKVPQIDCFEFVKNEPIYDGEPSIQYSDTDTVPSSEAVKNNVLVVESEDEQISLGSSQHICHLCNKSFKERCYLKNHLKRHNTGGEQIKMEVQRNQKFDYYLFKCDICNRRFHKAESLYNHRLVHDDKVDSKMYWHACDFCGKAYSTRHTLARHLRKRHPTEKSQQKDKKDTEKQSLTCDLCGKMYSKQHNLTNHKRLQHSTDKPKPTLNSCNFCDKSFSDSSALRKHVRTHTRERPYLCPECGKSFGAEGNLKQHLLRHSGDKPYECPYCPQKFSCHQNVSKHKIIHEGIKRHVCDICGNSFGKSDQLKRHKLVHSAEKPHNCDFCEKRFNRIEHLRRHMRTHTGEKPYKCKYCDRAYAQSNDHIKHLRTHVGDKVYRCELCPLTFRLASELRSHFTTHKNEDPTTRDRNMKALKEEQAKLQLKLAGKDILTADVDKFLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -