Basic Information

Insect: Merzomyia westermanni
Gene Symbol: -
Assembly: GCA_949987695.1
Location: OX465288.1:41337806-41346669[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.0054 0.9 11.7 3.2 1 23 241 263 241 263 0.98

2 27 0.00017 0.029 16.4 0.9 1 23 269 291 269 291 0.98

3 27 0.056 9.3 8.5 2.8 1 23 361 383 361 383 0.98

4 27 0.0005 0.083 15.0 4.7 1 23 389 411 389 411 0.98

5 27 0.043 7.1 8.9 0.2 2 23 446 467 445 467 0.97

6 27 0.64 1.1e+02 5.2 1.1 1 23 541 564 541 564 0.97

7 27 3.7 6.2e+02 2.8 0.4 1 15 571 585 571 592 0.80

8 27 2.6e-06 0.00043 22.2 1.8 2 23 642 663 641 663 0.97

9 27 0.007 1.2 11.4 0.5 1 23 670 693 670 693 0.95

10 27 3.8 6.3e+02 2.8 1.2 3 23 702 722 701 722 0.96

11 27 0.015 2.5 10.3 1.8 1 23 806 829 806 829 0.96

12 27 0.039 6.5 9.0 0.8 1 23 868 891 868 891 0.96

13 27 0.00015 0.025 16.6 0.3 2 23 907 928 906 928 0.97

14 27 2.3e-06 0.00038 22.4 4.4 1 23 935 957 935 957 0.98

15 27 0.00027 0.044 15.8 0.5 1 23 1114 1137 1114 1137 0.96

16 27 0.0028 0.46 12.6 1.1 1 23 1174 1197 1174 1197 0.98

17 27 9.3e-05 0.015 17.3 1.0 1 23 1212 1234 1212 1234 0.97

18 27 0.00031 0.051 15.7 3.2 1 23 1241 1263 1241 1263 0.98

19 27 0.0065 1.1 11.5 0.5 2 21 1290 1309 1289 1310 0.94

20 27 0.0012 0.2 13.8 1.4 1 23 1358 1381 1358 1381 0.97

21 27 0.16 26 7.1 0.4 1 23 1418 1441 1418 1441 0.95

22 27 0.00013 0.021 16.8 1.6 1 23 1477 1500 1477 1500 0.98

23 27 1.8e-05 0.003 19.5 0.2 2 23 1533 1554 1532 1554 0.95

24 27 8.1e-05 0.013 17.5 2.3 1 23 1560 1582 1560 1582 0.99

25 27 1e-06 0.00017 23.4 5.6 1 23 1588 1610 1588 1610 0.97

26 27 1e-06 0.00017 23.5 2.3 1 23 1616 1638 1616 1638 0.99

27 27 0.0014 0.24 13.6 0.1 1 23 1644 1666 1644 1666 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.0054	0.9	11.7	3.2	1	23	241	263	241	263	0.98
2	27	0.00017	0.029	16.4	0.9	1	23	269	291	269	291	0.98
3	27	0.056	9.3	8.5	2.8	1	23	361	383	361	383	0.98
4	27	0.0005	0.083	15.0	4.7	1	23	389	411	389	411	0.98
5	27	0.043	7.1	8.9	0.2	2	23	446	467	445	467	0.97
6	27	0.64	1.1e+02	5.2	1.1	1	23	541	564	541	564	0.97
7	27	3.7	6.2e+02	2.8	0.4	1	15	571	585	571	592	0.80
8	27	2.6e-06	0.00043	22.2	1.8	2	23	642	663	641	663	0.97
9	27	0.007	1.2	11.4	0.5	1	23	670	693	670	693	0.95
10	27	3.8	6.3e+02	2.8	1.2	3	23	702	722	701	722	0.96
11	27	0.015	2.5	10.3	1.8	1	23	806	829	806	829	0.96
12	27	0.039	6.5	9.0	0.8	1	23	868	891	868	891	0.96
13	27	0.00015	0.025	16.6	0.3	2	23	907	928	906	928	0.97
14	27	2.3e-06	0.00038	22.4	4.4	1	23	935	957	935	957	0.98
15	27	0.00027	0.044	15.8	0.5	1	23	1114	1137	1114	1137	0.96
16	27	0.0028	0.46	12.6	1.1	1	23	1174	1197	1174	1197	0.98
17	27	9.3e-05	0.015	17.3	1.0	1	23	1212	1234	1212	1234	0.97
18	27	0.00031	0.051	15.7	3.2	1	23	1241	1263	1241	1263	0.98
19	27	0.0065	1.1	11.5	0.5	2	21	1290	1309	1289	1310	0.94
20	27	0.0012	0.2	13.8	1.4	1	23	1358	1381	1358	1381	0.97
21	27	0.16	26	7.1	0.4	1	23	1418	1441	1418	1441	0.95
22	27	0.00013	0.021	16.8	1.6	1	23	1477	1500	1477	1500	0.98
23	27	1.8e-05	0.003	19.5	0.2	2	23	1533	1554	1532	1554	0.95
24	27	8.1e-05	0.013	17.5	2.3	1	23	1560	1582	1560	1582	0.99
25	27	1e-06	0.00017	23.4	5.6	1	23	1588	1610	1588	1610	0.97
26	27	1e-06	0.00017	23.5	2.3	1	23	1616	1638	1616	1638	0.99
27	27	0.0014	0.24	13.6	0.1	1	23	1644	1666	1644	1666	0.95

Sequence Information

Coding Sequence: ATGACATCTTATCAGTGTCGTACGTGCCGTGAGACCAAAAAATGCCAGTATTATGCTCTCACAGATTTTTTGGACGAGGAACGCTGCCCTAAGAAGACACTTGCCGATTTCCTTTGGGATATTGCAAAAATCAATAACAAAACTGAGGACGCCAAACGTTTACCCCAACAAATTTGTGCAGGATGCTCACGCAAGCTTAATAGCACCTATTCGTTTATCCTCCAAGCACAAGTGGCTAATAGAAAACTATTTGCAAGCTTATATATTGGAAAAGCAGGGTGTAGCTCTGCAAAAGatttaccaaataaaaataatgattgcTTATTGGAGACTCCCATAGATATACCGATACGGCAAACAATTATTAAAGAAGAACATGATAATACCGAGGAAGAACGCAGAGAAGACTTATCTGTCGATAAAGAAATCGAAAACGGAGCAGAAATTGGAAATGCGGAAGCAGAATCGGTGAAGGAAGAGCGTATAGATTTGGAGCTCAAAACAATAGATACTGGAAATGCAAGCGAAGATGAAAGTGCCGGAGTCGATCCTATTACCACAGTTGATAAGGAGAAAGGAAATCCGGTGACGCTAGACAATGCCAGTGATCACGATGCTGATAAGAGTGAAGATGATACTCCACCAATTAAGCGCAGACGCGGTAGATCGCAAACAAATACACAAGCATTAGAATTTGCTTACTGTGACGATAATGGACGCTACCATTGTAAAAAGTGTGATAAAAGTTTTGTCTGGAAAAAAGATGCAGAACGTCATTACAGAATACATACTGGCATATATCCATATGAGTGCGATCAATGTGGTCTTCGCTTCCAAAGAAAGGATAAATATGATAATCATATGAATGTGCATGCTAGACGAAATAATGAGGAAGATAAACCTATTCCAGaAGACGAAATGTTGGACATAGAATCGAAATTGGAAGTAGAATTGGATGCGAATGATACCAGTGACGAACAAAGTGAGGAGGAATATGAAGAAATTAAACCTAAACGACGTCGGGGTAAGCAATCTTCTTCAAAGAAGCCGGAATTTACCTTTAACAATGACGATGAACGCTATCATTGCAATAGATGTAATAAGGACTTTGCCTGGAAAAAAGATGTTGAACGGCATTTGAAAAGCCATTATGGTATTTATCCATACGAATGTAATAAGTGTGGACATCGTTTTCAGCGAAAAGACAAGTTTTCCAATCACTTGAAGGTGCATGAGAGACAGGAAGCTGGGGGTACACGTCGACCAAAATCAGAAAAACGCGCAGAATTAAGTTTCGCAGAACATTTATATACAGAGCTGCGGTTCCGTTCGCTCGAATGTAAACTGTGTACTgaaaatataccaaatttaGCAACACTCCGCACGCACTTGCAAACACATATCGAACCAAATACAATACATATAGAAGCGGATAGTGACATCGTTAAAGAACTATTCCCTAATGCGAATGGTGGATTGAATcacataaaattacaaatatgtaAAGATATCAAAGAGCAACGTTTTGGGAAATATTATGCAATTATTAATGCTTATGGTTATGAAATGGCTCTTAGTGATTCTGATACAGAACCTAATACTGAGGAGGCGGACAACAAATATGAATGTGAATTATGTCTCGTAAAGATGGCACGCAAGCATCAATTAATACAGCATTCAAAAACAGAACATTCCCAAGAAAAATTTCCACATAAATGTAATGTTTGCAAATTGCAATTTATAAGCGCACCAATGTATGAGTTTCATTCACGTACACAGTGCCGTAATCGTGATAGAAAATATCAATGTCTAAAATGTCCAGGAAAATTTGTATGGTTGCAGAACCTTCAAGGACACAAATGCTCCAATCGTCTTAATTTGTACGCGCCAAAAAAAACAGAACAGCGTAAACGAAATTTGTTACAATGCAACTTCTGTGATAAAACTTTCCGTTACGCCACTGACTTGAAACGTCATCAAGAAACTCACAATTTGAGTAGTCGTTCGCATATTTGCAGTATTTGTagtcaaccatttttaaaagcCGAAAATCTGCGTCAGCATATTCGGCAAGCTCACGATCAATTCAAACGACGTATTCTGTGTTGCCTGTGTGGTGAAAAACCTAAAACATTGGCAAAGCTACGTGTACATTTACAAAATCATGCGGATGGTTGGACTGGTATCAGATACACAGAGGGACTCTATTTTAAAGCACACTGGCCACAAGGTTGCAAGGGTAAAGAAGCAGAAGTAGAACAGAGCATTGTAATCGATTTTGCTGGACAGAATCTTACGCCCTATTACTGTGCCGTGGACGAGAGTGGTAATGAGATGGATTTGTATGACTCTGAAACAGATTTGGAGATGGAAACTGATGCACCCTCGTCTAGTGGACAACCTACATCAAACGTGTATAGTTGCGATTTGTGTAACGAAGTATTCTACAGAAGATCACGTATATTACAACATCAACATAGTGCACATTCCGATAGTTCAGAAACATTACCACACGCCTGTGGACGTTGTGAGAAGCAATATGTTTGCTTGGGCTTACTCGAACGGCATTATAAGCGTGATTGTGGTAATATATATAAGCGTTTTGATTGTAAGCGATGTTCAGCGCGTTTTGTGTGGGAAGAAAATTTGAAGCAGCATATGCAACGTCAGCACATCGATCCAGAACAACAAATAAGTCGCCAACTTGCTAATAAACTGCAATGTGATGAATGCAATAAAGTATTTGTTTGGCCCAAGGATTTAACACGTCACAAACGTATACATATGCCTGATGATGAGAAGTTTGAATGCCCATATTGTGAGCGAAAATTCTATCGAAAAGATCATTTGCAAACTCACTTGAAAACTCATGGCGCCTCTGGTAATACGGCTGCGGCGACTACAACTGCAGCAGCTACCAAGCGCGAGCTTAATCGCAAAGTGAATGCTGTTGAGCCGCACCTTTGTAAACCCAATGGTCTAAAATGTGTGCAATGTAAAATCTGTCTTTCCACACATACGAAAATTGCCGATCTTCGTGAGCATTTAATGGAACATCGTAGTGAAGGTTCACTGTCCCAATATGTTGCCACAAACTCAAAAACATCTCTAAACTTCTATCCAGATGAAGCCCCTATGCCAAGGGAGTTATTGATAGCAAGAATGATGGCTGATATAACTGCTGGCCAGCTAGACCGTTTTTATTCCATAACAAATGAGCTTGGTCATGAGTTAAGCATAAGTGGTTCTGATACTGATGATACGGACTCAGATTCAGAGCCTGATGAAACTTTAGATCGTGCCATTAGATATAGCATTCAACATCCAAGACGTTCAACATACAATTGTGATTTGTGTAGCATTGCTTTTACACGCAAGTACAAACTGTTTGCTCATCAAGCAAGCGATCATAGTTGGGACGAAGCTCCTTATGTATGTCAAAGTTGTCAAGCACATTTCCTATGCGATAAATTATTGCAGTCGCATTATCGCCATCAatgtaaaaatttgttgaaacgtTATGTGTGTCGCAAATGTCCACAACGTTTTATGTGGAAGGAAAACCTTAAAATGCATTTACGAACTATGCATCCGGATAGTGAAGATGTacaaaagATTTTCTCGCTCAGTTCCTTTGATTGTGATGAATGTTCACGAAGTTTCCAAATGCAGAAAGACTTAACTCGTCACCAGATGATACATCGCACCGATGCTACTGTTTTCCCATGTCTCTTTTGCCAACGGAAGTTTTATCGCCGTAGCAACTTATATTTGCATATTAAACGTCATGGTATAACATCACATGAGCTGAGTGCAGCCGCTGCTCACATCACTGCTCACAAAGGGCCGAATGGCAAAAAGGATATTCATTGCCGCGTATGTAGTATGCAATTTAAAACCTTGTCTGCTTTACGTGCTCACCTTCGTCAAGAGACTACAGCGATACTACCATCTCACCACGACTACAGCTCACAGCAAAACTATTCTATTATGAATGAATTAGGATTTGAATTAGATATGAATGATTCAGAGACAGAGGGGGAAGATAATGATGATGCAATAGTTAAGTCCTACAAATGCCAAATTTGTGGGCTGGTTTGTAAGAGACGCTATGAAATGGGCCAACATCAGTTATCTATACATAAACACGAATATATAACACTTAAGTGTGATAAATGCGTTTTTAGAACGGTTTCAAATGATATTATGGAGCATCACTTGCGTACACAATGTAACAATAGTGAAAAACAGCATCAATGCGGTCAATGTTCCTACAAATTTATGTGGCCCGAGAACTTGGAAGTCCACGTTAAATTGGTGCATCCACCAATACCTGAAGAAGCACAGCCACTTAAAATTGCAACAGAGGCAATATCAGCTACAACAAATGATGCACCAGGACATAGTATACCCGTGCCACCTCAAGTATTCCAATGCGATCAGTGTGAGCGTCGTTATAACCGTAAAGATCGGTTAGTTGCTCATATGAAAAAATCACATGCTCACAACTCCGACAACAATGATCCTAGTTGTAGCACAAGTGCAGCTGAAACTAAAACATCAATTGGCAAAAAGCCGCCGAAAGAGAAGTCGTTTCTATGTGCATTCTGTGGCCGTGCTGTGAGCTCATCATCCAATTTGATTGTTCATATGCGTCGCCACACAGGCGAAAAACCGTTCCAATGTGAATTTTGTGATAAGGCATTTCCTCGTTCTTCGGATTTGGCATGCCATCGACGAACACACACAGGCGAGAAACCCCATCATTGTACTGTGTGTGGTAAGTCCTTTTCACGATCATACAAATTGCAACAACACATGCGTATACATTCTGGTCAAAGGCCATACAAGTGCACATATTGTGAGAAGAGCTTTACGCAATCAAATGATCTTAACTTGCATGTTCGTCGGCATACTGGTGAACGTCCTTATGTGTGCAATGTTTGCGGTGAAGGGTTCATTCAAGGGACGGCTTTAAAGCATCACCGAGCAGCGCATGCTCATTTCGAAGGAGATGCACGAGAGCAACGAACAAACAATGTTTTACAATTAGATGAAGGAAACAGCTTAATGCAATTGTAA
Protein Sequence: MTSYQCRTCRETKKCQYYALTDFLDEERCPKKTLADFLWDIAKINNKTEDAKRLPQQICAGCSRKLNSTYSFILQAQVANRKLFASLYIGKAGCSSAKDLPNKNNDCLLETPIDIPIRQTIIKEEHDNTEEERREDLSVDKEIENGAEIGNAEAESVKEERIDLELKTIDTGNASEDESAGVDPITTVDKEKGNPVTLDNASDHDADKSEDDTPPIKRRRGRSQTNTQALEFAYCDDNGRYHCKKCDKSFVWKKDAERHYRIHTGIYPYECDQCGLRFQRKDKYDNHMNVHARRNNEEDKPIPEDEMLDIESKLEVELDANDTSDEQSEEEYEEIKPKRRRGKQSSSKKPEFTFNNDDERYHCNRCNKDFAWKKDVERHLKSHYGIYPYECNKCGHRFQRKDKFSNHLKVHERQEAGGTRRPKSEKRAELSFAEHLYTELRFRSLECKLCTENIPNLATLRTHLQTHIEPNTIHIEADSDIVKELFPNANGGLNHIKLQICKDIKEQRFGKYYAIINAYGYEMALSDSDTEPNTEEADNKYECELCLVKMARKHQLIQHSKTEHSQEKFPHKCNVCKLQFISAPMYEFHSRTQCRNRDRKYQCLKCPGKFVWLQNLQGHKCSNRLNLYAPKKTEQRKRNLLQCNFCDKTFRYATDLKRHQETHNLSSRSHICSICSQPFLKAENLRQHIRQAHDQFKRRILCCLCGEKPKTLAKLRVHLQNHADGWTGIRYTEGLYFKAHWPQGCKGKEAEVEQSIVIDFAGQNLTPYYCAVDESGNEMDLYDSETDLEMETDAPSSSGQPTSNVYSCDLCNEVFYRRSRILQHQHSAHSDSSETLPHACGRCEKQYVCLGLLERHYKRDCGNIYKRFDCKRCSARFVWEENLKQHMQRQHIDPEQQISRQLANKLQCDECNKVFVWPKDLTRHKRIHMPDDEKFECPYCERKFYRKDHLQTHLKTHGASGNTAAATTTAAATKRELNRKVNAVEPHLCKPNGLKCVQCKICLSTHTKIADLREHLMEHRSEGSLSQYVATNSKTSLNFYPDEAPMPRELLIARMMADITAGQLDRFYSITNELGHELSISGSDTDDTDSDSEPDETLDRAIRYSIQHPRRSTYNCDLCSIAFTRKYKLFAHQASDHSWDEAPYVCQSCQAHFLCDKLLQSHYRHQCKNLLKRYVCRKCPQRFMWKENLKMHLRTMHPDSEDVQKIFSLSSFDCDECSRSFQMQKDLTRHQMIHRTDATVFPCLFCQRKFYRRSNLYLHIKRHGITSHELSAAAAHITAHKGPNGKKDIHCRVCSMQFKTLSALRAHLRQETTAILPSHHDYSSQQNYSIMNELGFELDMNDSETEGEDNDDAIVKSYKCQICGLVCKRRYEMGQHQLSIHKHEYITLKCDKCVFRTVSNDIMEHHLRTQCNNSEKQHQCGQCSYKFMWPENLEVHVKLVHPPIPEEAQPLKIATEAISATTNDAPGHSIPVPPQVFQCDQCERRYNRKDRLVAHMKKSHAHNSDNNDPSCSTSAAETKTSIGKKPPKEKSFLCAFCGRAVSSSSNLIVHMRRHTGEKPFQCEFCDKAFPRSSDLACHRRTHTGEKPHHCTVCGKSFSRSYKLQQHMRIHSGQRPYKCTYCEKSFTQSNDLNLHVRRHTGERPYVCNVCGEGFIQGTALKHHRAAHAHFEGDAREQRTNNVLQLDEGNSLMQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01358226;
90% Identity: iTF_01358226;
80% Identity: -