Basic Information

Gene Symbol
mybL
Assembly
GCA_949987695.1
Location
OX465288.1:42058285-42066321[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 2.7 9.1e+03 -1.5 0.1 3 18 160 175 158 176 0.87
2 6 0.16 5.4e+02 2.4 0.0 15 46 210 247 204 247 0.75
3 6 3.2e-13 1.1e-09 39.9 0.1 1 43 253 296 253 298 0.93
4 6 2.2e-06 0.0076 18.0 0.0 2 41 308 353 308 356 0.87
5 6 1.3e-10 4.4e-07 31.5 0.0 2 44 363 406 362 408 0.89
6 6 3.3e-10 1.1e-06 30.2 0.1 3 44 416 458 415 460 0.96

Sequence Information

Coding Sequence
ATGACATCCAATGATGAAGATTCCAGCTTTAGCGAAGGAACTATTGAtgAGTTTTCAGAGCCAGAATACGAAGATGATCCATTTCGCAAATTGGCCGGCTTTAGCGCCAAATATATGACCGAAATAACAAATTTGCTTAGTACGTTCAGTAATGTGAACTGTGAAAATGCTTTATCATTAAATAAAGATATGCAGCAACGTTTACAGGAAGTTCGGAAACGTTTACAAACTTTGTTGCATGCTGTAAAGCAACGATATAGTTTAAACCAACAAAGGCTCAAACTGAATTTGGGAAAGAAAAAACGCGGCGTTGGAATGCGCGGCGCTTATCTTAAAGGTGGCACATTCTTTTTCAAAGGCAATATGTTCTTTAAAGATATAAAATGTCGTAGTTGCCCAAATAATGAGGATTATGAATATCGAAAGAATGTTGAGGGTGAAATGTTTCCGATGGACTTTGAGTTATCTAGTCGCCATGTTTGGTCTTTGTTGGACAAAAAAGCTTTGGTACAAGCTGTGAAGGAGCAGTTAGTAGACTATTTATCTGATTGTAAATCACGTGACATTAACAAAAAGTCAAAGGATCTGCAACTTCAAGTACAAGTATATTCAGAAAAGTTGTCCTCCCTATTGTCAAAGGTAGATGATAAGTTCCAGATCGATTGGGAACAAGTTTCTGCCCACAATTTAAGCTATCGTCATTCGCCCAGTAGCTGTAAAACAATGTGGCTTGTATACTTGCATCCATCACTTAAGCGTAGTGCTTGGACTGCagaggaaaataaaaatcttttattaGCAGCTCAGAGGCATGGTTATCAAAATTGGCAAAGCATTGCAAAATCAATCCCGAAACGTTCAGATTATCAATGTTTCGTGCAATACCAAACGTCTGTATGTTTTAATGACACCAAACGTTGGGGGCGTTGGGATAAACGTGATGACGCAAAGCTGCAGGAGGTGGTACAGAAAAGAACAGTGAATGGTATAGTTGATTGGACTGCCGTTGCTTCATATTTTCCGCATAAATCTAAGACATCACTGCATTGCCGTTATATGTACTATTTGGATCCGAAAATTAGTCATGtaccATTTACACCCGAAGAAGACCTCATATTGTTAGCAGCAGTTGAAGAATACGGCGAAAAGTTTTCCCTGCTACCACGCGACTTATTTCCAAATCGGTCTATCGCCCAGTTGCGCATGCGTTACAAATACACTCTACTAAATCGTCATACAATAACACCATGGTCAGCAGAGGATGATAAAAAGTTGATTGAATATGTTGCTGCAAATGGGAAAGCCTCATGGTTACGTTGTAGTGAACTGCTTGGTAATCATAATCGCACTAGCTGTCGTACACGATTTAAtactatacaaaaatttttggaaaaaaatccaaatgcaaCGCTCGAGGATAtaccaagaaaaaagaaatgcGTTTTAAGAAATAGtgtaataacaaaacaaaattgggtaGAAAAGGTTGCGGAGTTGCGTGAAAACCCTGGAGCAGTGCTTACACCCCCAAGCAACAAAGTAAAAAGAGCTGAACGTAGACTTGAAAAGCAAATGACAAAGTCAGAAATTAAAGCACTAAAGGTTAAAAGCCCGCATAAATGTAAGGTAAAAAAAGCTCGGCTTAAAACAAAGAGGGTGGTGCCTTATGTTGAACGACTGCGGGTTGTTGAACAACAgctttatcattattttaagtatGCCTACAATTTTCGTTTAGGCACAGATGTATGTACAAAACCACCGAATGCTACCTTATGCGAGGTGGCGCATGCACTTGACTTTCAAGCTGATTCTAACCAAGAATATAATTCCGATACAACGGTTACATCATATATAAGAAAGCGTTGTAAACATTATCTGCAACGAAAATGTGAATTAATCACGGAAAATGAGAGCAAACAATTTGGCTTAAGCTTACCACCGAGCTGGTCAACAGCACTGTCGTTTCGAGCACTTTGTGTACAATCAGCCCAGTTACAAAACGAGGGAGGAGgcgaaaatgaaaggaaaaatgaaaagccaagtgaaagtgaaataaataatcaTCGTGCGGTGCAACGTTTCCGTAATCGTATGTTCGCATTATTTTTTCAGACTGCACTTTTAAGTCGGTTAGAGCCTCAACGTTACAATGATCTCATACAAAATACAACCCCTGTTCAAGAAACAATAGATACATTAACAATAGAAGAATTTACACAGAATACAACATCTGCGtatgaacaacaacaattagatTTATCTCGTGTAAAGAACGAATTTCCTTCCCAATTCTCGtcaaatcaacaaaatgttgtaaccacaaatttaataaagaaaccTAAGGGGGAAGTATTGCAGAAGAAGAGGAGAAAATCTAAAGATGTTTTCAGAAATGAGAACGAAACAAAAATGGAAATCTCGAATAAGAAAGGAAAAGCTGaatcgaaaaaagaaaagaaaactgcAGTTTGTAAAAATGAAGGTGGTACTAAAATTGTGGTCAAGCAGGCCATATCTTTGTTAGAAACTAACTCGGGGTGTACTGAAAGTAACCCACAAACCACAAATATTCCAGCAGAAAATTTTGGGCGGGCGACAATGAATCAAACAGTTGCCCTACAACAACCATCCGttagtacatatttatttatcaaacaagaGAATAATCATTCACctgtgcaacaacaacatacaccTTCATCACAGCTAGATGCAAGTAACTTAACGATACAAGAAAATTTAACAATGCAAGCACAacagaaaatgaaagcaaaaaagCGCAAATTGTTACATAATTCAACATCGGGAACTGATCCTTACAAGAAACAAAATTGCAATGATGCTGCAATACAACTAACAAATATAAAGACTGAATATGAAATTTGA
Protein Sequence
MTSNDEDSSFSEGTIDEFSEPEYEDDPFRKLAGFSAKYMTEITNLLSTFSNVNCENALSLNKDMQQRLQEVRKRLQTLLHAVKQRYSLNQQRLKLNLGKKKRGVGMRGAYLKGGTFFFKGNMFFKDIKCRSCPNNEDYEYRKNVEGEMFPMDFELSSRHVWSLLDKKALVQAVKEQLVDYLSDCKSRDINKKSKDLQLQVQVYSEKLSSLLSKVDDKFQIDWEQVSAHNLSYRHSPSSCKTMWLVYLHPSLKRSAWTAEENKNLLLAAQRHGYQNWQSIAKSIPKRSDYQCFVQYQTSVCFNDTKRWGRWDKRDDAKLQEVVQKRTVNGIVDWTAVASYFPHKSKTSLHCRYMYYLDPKISHVPFTPEEDLILLAAVEEYGEKFSLLPRDLFPNRSIAQLRMRYKYTLLNRHTITPWSAEDDKKLIEYVAANGKASWLRCSELLGNHNRTSCRTRFNTIQKFLEKNPNATLEDIPRKKKCVLRNSVITKQNWVEKVAELRENPGAVLTPPSNKVKRAERRLEKQMTKSEIKALKVKSPHKCKVKKARLKTKRVVPYVERLRVVEQQLYHYFKYAYNFRLGTDVCTKPPNATLCEVAHALDFQADSNQEYNSDTTVTSYIRKRCKHYLQRKCELITENESKQFGLSLPPSWSTALSFRALCVQSAQLQNEGGGENERKNEKPSESEINNHRAVQRFRNRMFALFFQTALLSRLEPQRYNDLIQNTTPVQETIDTLTIEEFTQNTTSAYEQQQLDLSRVKNEFPSQFSSNQQNVVTTNLIKKPKGEVLQKKRRKSKDVFRNENETKMEISNKKGKAESKKEKKTAVCKNEGGTKIVVKQAISLLETNSGCTESNPQTTNIPAENFGRATMNQTVALQQPSVSTYLFIKQENNHSPVQQQHTPSSQLDASNLTIQENLTMQAQQKMKAKKRKLLHNSTSGTDPYKKQNCNDAAIQLTNIKTEYEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01357875;
90% Identity
-
80% Identity
-