Mwes013274.1
Basic Information
- Insect
- Merzomyia westermanni
- Gene Symbol
- -
- Assembly
- GCA_949987695.1
- Location
- OX465289.1:79147426-79148926[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.2e-07 0.00071 20.9 0.0 4 40 24 60 21 65 0.85 2 2 2.3 2e+03 0.2 0.1 25 37 109 121 108 126 0.85
Sequence Information
- Coding Sequence
- ATGTCAAATGTGCCCCTTATTATTCGTAATTATCGAAAAAAGACATCGCAAACCGAAATTAATGAATCAAATATGAAAAAGGCCATATTGGATGTAAGAAATGGAGTCGAAACCCAAACTACGGCAACAGAAAAATACGGTATTAATAGAACGACATTAATAATGCGGATGAAACGTGAAGATCCACTTAAACTTACCGTGGACTCGACCAATAGTCATTCAGAAGATGAATTTTGCTATCAATCTAAGTATTCATCGcgccaaatttttacaaagcaAAGAGAAGAGGAACTGGTAgcctatataaataaatgttgttTTTACGCATATGGGTTATCATACCAGACATTTAGAAAGTTTGTTTATGAATATGCTAAAACTAATCAGATCGCCACTCCAGTTGGATGGGATGGCCCTAAGGAAGCAAGTAAGGACTGGCTTTATGCTTTTCTCAAAAGAAACCCAACCATTTCTTTGCGAAAACCAGAGAAAGTTAGTCTAGCCAGACTAAGGGGCTTTACAAAATCATCTGTcgaagaattttactcaaatctCAGGAGAGTATATGAAAAATACTCTTTCCAGCCAAAGGGTGTGTACAATTTAGATGAAACTGGAGTCACTACGGTTCTAGAACCTCCTAAAGTTCTCGCCCAGAAAGGACAACGAATAGTTTCTCAGGCAACATCAGCAGAACGTGGAAGCCTAGTCACTATGGTTGGGATTATAAGTGCCAGTGGAAACCATTTACCCCCAGTTCTCGAAAGCATAACCTTTTGCAATGATAATGGAATCGTAATGTTATCCTTTCCACCTCATACCTCGCATCGCTTGCAGCCATTAGATGTGTCCATATTCGGTCCATTTAAGCAATTCTGTCGAAGCAGTTTCAATGATTTCACTGCTTTAAGCAGCGGAAAACAAATAACCATTTATGATGTGGCTAGACTAACGAatcaaccttttcaaaaatcgTTCTCGCCACAAAATATACTGAACGGGTTTAGGAGTACAGGTATTTATCCCTTTAATTCCCAAACTTTTAGAGACGACGAGTTTACTTTGGAAAGCTTATCGGAAGAAGAATCTCTCCCGGTTGCTAACGAAAATGAGAGTATAgataatatacaaaatgtaaTGGATATGCAAGTAAGCCCACAAATCAATACATTGCAAAACCGTACTCCTGAAATGAAACTTCCAGTTAAAAGATTGCGTGCCTCCAAGAAAACGAGCAGCAGTGTAACATCCCGAATCATAACTAGTTAA
- Protein Sequence
- MSNVPLIIRNYRKKTSQTEINESNMKKAILDVRNGVETQTTATEKYGINRTTLIMRMKREDPLKLTVDSTNSHSEDEFCYQSKYSSRQIFTKQREEELVAYINKCCFYAYGLSYQTFRKFVYEYAKTNQIATPVGWDGPKEASKDWLYAFLKRNPTISLRKPEKVSLARLRGFTKSSVEEFYSNLRRVYEKYSFQPKGVYNLDETGVTTVLEPPKVLAQKGQRIVSQATSAERGSLVTMVGIISASGNHLPPVLESITFCNDNGIVMLSFPPHTSHRLQPLDVSIFGPFKQFCRSSFNDFTALSSGKQITIYDVARLTNQPFQKSFSPQNILNGFRSTGIYPFNSQTFRDDEFTLESLSEEESLPVANENESIDNIQNVMDMQVSPQINTLQNRTPEMKLPVKRLRASKKTSSSVTSRIITS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -