Mwes032329.2
Basic Information
- Insect
- Merzomyia westermanni
- Gene Symbol
- -
- Assembly
- GCA_949987695.1
- Location
- OX465291.1:79313874-79315367[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-08 2.9e-05 25.3 0.0 4 41 20 56 17 60 0.86 2 2 7.1 6.2e+03 -1.4 0.0 12 22 136 147 131 149 0.73
Sequence Information
- Coding Sequence
- ATGCCCAATATTTACAAACGAAAAGCTAGCTCTGCCAGGGCTTCGTGGTCCGATAAAAAGTTAAGAGATGCGAttgatgcaataaaaaaaaaattgtctatcaATGTGGCTGCAAAAGAATATAAGGTCCCTTCTTCAACCATAAGGCGGTACCTGAAATCTGGAACTTGTACGAAAAAAACATTGGGTGGACCTATTTGTTTGGGAGACGAAATCGAGCGGAAAATGGTTTCacacattaaaaaaatgcaaggcCATGGGTTCGCTCCAACACAGAAGATGGTTCGCGAAATGGCATATGACATTGCTGAAAAACTTGGTGTTCAGCACCGCTTTAACAAGGCAGCCAAGAGAGCCGGCGACGAATGGTTGAAACGGTTTTTGCAGCGAAACAAAGACCTTTCGATTCGAAAATCTGAAGGTGTTTCGCAAGCTCGAGCGACCAGCATGAACCGTGAAGAAACTTTGGATAGATCGTTTTTCCAAGCATTCAAGTCATACTATTACGCTGcgtgtaatttatttattcgcaATAATCCACATCGCAAAATTGGACGATGTGAATTCGGAGATTTACTCTCAAAGGCTTGGGGGAATTCTGCAGTGTCGAAAAATGGAATATCGGGGTTCGAGGCGACGGGTCTTTGGCCTTTTAATCCAACTATAATCCCAGAATATGCTTTTATAGAAATGAGCGCAGAAATTGAGTTGGAAATTCCGCGGGATCTGACGCCACCACCGGACGTAATTGACCCATTATTAGACGCCCCGGAGCCTTCTGATGTAACCCCTGGTAAAGCTTTAGACCAAGTCTGCCCAGTTCCATCGGTATCTAAgcctaaaaaaaaagtgaaagagcACAAAAGGCACGGGTGCTTACAACGCCAGAAAACAGATCACAGCAATTGCTCAAATCTTTGA
- Protein Sequence
- MPNIYKRKASSARASWSDKKLRDAIDAIKKKLSINVAAKEYKVPSSTIRRYLKSGTCTKKTLGGPICLGDEIERKMVSHIKKMQGHGFAPTQKMVREMAYDIAEKLGVQHRFNKAAKRAGDEWLKRFLQRNKDLSIRKSEGVSQARATSMNREETLDRSFFQAFKSYYYAACNLFIRNNPHRKIGRCEFGDLLSKAWGNSAVSKNGISGFEATGLWPFNPTIIPEYAFIEMSAEIELEIPRDLTPPPDVIDPLLDAPEPSDVTPGKALDQVCPVPSVSKPKKKVKEHKRHGCLQRQKTDHSNCSNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -