Mwes028768.1
Basic Information
- Insect
- Merzomyia westermanni
- Gene Symbol
- -
- Assembly
- GCA_949987695.1
- Location
- OX465290.1:147821806-147822468[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-08 1.7e-05 26.0 0.0 4 41 20 56 17 60 0.86 2 2 4.4 3.9e+03 -0.7 0.0 12 22 121 132 115 134 0.70
Sequence Information
- Coding Sequence
- ATGCCCAATATTTACAAACGAAAAGCTAACTCTGCCAGGTCTTCGTGGTCCGATAAAAAGTTAAGAGATGCGAttgatgcaataaaaaaaaaattgtctatcaATGTGGCTGCAAAAGAATATAAAGTCCCTTCTTCAACCATAAGGCGGTACCTGAAATCTGGAACTTGTACCAAAAAAACATTGGGTGGACCTATTTGTTTGGGAGACGAAATCGAGCGGAAAATGGTTTCacacattaaaaaaatgcaaggcCATGGATTCGCTCCAACACGGAAGATGGTTCGCGAAATGGCATATGACATTGCTGAAAAACTTGGTGTTCAGCACCGCTTTTTGCAGCGAAACAAAGATCTTTCGATTCGAAAATCTGAAGGTGTTTCGCAAGCTCGAGCGACCAGCATGAACCGTGAAGAAGTAAACAAATACTTTGCTCTTATTGAAACTATTATGACTGAAAATGAACTTATGGGCAAaccacttaaaatttttaacgtcGATGAGACCGGTTGCCAGTTAAATAATAGACCAGAACTAGTTGCCGCCCAAAGAGATTGGAAAAATATCGCAGCTATCGCCTCGGGAGAGAAGGGTGAGACAATAACAGTTATAGCTTGTTGCAAAGTTGAGGGTACCTTTTTTGCCACCAACATGTTTGTTTAA
- Protein Sequence
- MPNIYKRKANSARSSWSDKKLRDAIDAIKKKLSINVAAKEYKVPSSTIRRYLKSGTCTKKTLGGPICLGDEIERKMVSHIKKMQGHGFAPTRKMVREMAYDIAEKLGVQHRFLQRNKDLSIRKSEGVSQARATSMNREEVNKYFALIETIMTENELMGKPLKIFNVDETGCQLNNRPELVAAQRDWKNIAAIASGEKGETITVIACCKVEGTFFATNMFV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -