Mwes047917.2
Basic Information
- Insect
- Merzomyia westermanni
- Gene Symbol
- -
- Assembly
- GCA_949987695.1
- Location
- OX465293.1:32149357-32149920[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.5e-10 6.5e-07 30.6 0.1 2 40 16 54 15 59 0.91 2 2 1.3 1.1e+03 1.1 0.1 26 35 105 114 103 117 0.87
Sequence Information
- Coding Sequence
- ATGGTacgcaattacaaaaaaaagactAATCGGTGTGCCATAAATGAAGATAATATTAGAAAGGCAATAACGTATATCAGAAATGGGACTGAAACGCAAACTACAGCTGCCATCAAATACGGAATAAATAGAACAACTCTAATAATGCGTTTAAAACATAAAGCACCTTCTGCCAATCCTTCAGATTCTGGCAATGATAGCAGCTctgatgattattttaaatttcagtcGAAATTCACATCTCGTCAGACATTTAATAAGCAACAAGAAACCGATATTTGTGATTACGCCAAGAAATGTGCTTTTTATTCTTACGGCTTATCttatcaaactttaaaaaagtttgcATATGATTACGCTAAAGATAACAATTTGGTTACTCCAACTGCCTGGGAAAAATCCAAAGAAGCTGGAGACGATTGGCTTTACGGATTTCTTAAAAGAAATGATTCTATATCTCTTCGTAAACCTGAAAAGATCAGTTTGGCAAGATTACGCGGTTTTACTGAATCAGCAttggaaagttttttcaaaaaccttacTACGTTGTTTGAAAAGTACTAA
- Protein Sequence
- MVRNYKKKTNRCAINEDNIRKAITYIRNGTETQTTAAIKYGINRTTLIMRLKHKAPSANPSDSGNDSSSDDYFKFQSKFTSRQTFNKQQETDICDYAKKCAFYSYGLSYQTLKKFAYDYAKDNNLVTPTAWEKSKEAGDDWLYGFLKRNDSISLRKPEKISLARLRGFTESALESFFKNLTTLFEKY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -