Mwes049494.1
Basic Information
- Insect
- Merzomyia westermanni
- Gene Symbol
- -
- Assembly
- GCA_949987695.1
- Location
- OX465293.1:55782613-55787712[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-09 1.4e-06 29.5 0.0 5 36 1 32 1 38 0.92 2 2 1 8.9e+02 1.3 0.0 2 15 466 479 465 480 0.89
Sequence Information
- Coding Sequence
- ATGAAAAAAGCTATACATGCAGTAAGGAAAGGAGATATGGGTATTCTTTTGGCTTCCAAAACATTCAATGTCCCCCATACTACACTGCAGCGCATGTCCAGAAGTGAGAAACCCATCGCCGAACTATTGGACACTAAACTGGGTCGGGCTCCAATTTTAACTGCAGCAATTGAGAAAGATTTAGTTAAATATTTGTTAGAGATAGAGTCGAGGTATTCTGGACTAACACGTGCAGATGTCCGGTCTTTGGGCTATCAAATTGCGAAAAAGAACAATATTCCAAATAAATTCTCTATCATAAAAGAGTGTGCTGGTAAAGAATGGCTTAAAGGCTTTTTGAAGCGTCACCAGGATGTTTTAACTTTTCTAAAGCCAACTGGTACAAGTGCCGACCGTGTGCGAGagGCTCCAATTGAGAATACGAGTTCCATAGCAGTAGACACTCGAGTTGAGACCATGAACTTAAAAGAAACATCAGTCACAACACATTCAGAAATTGATCCTGACATTCATTGTACGTACGCAAAACACAAATGCAAGGATTGTGGCAACGCACAACCAAACAAGAATACTCAGCGCGGATCAAATCAACGCGCAAGCAATTCTCGTCCGAATacgcaaaagaaaaattatcgtGCTAAAGTTATAGCAGCCACAGCGAGCGTTCATTGCATACACAACCATATGCCGCAAAGAAAGTATATCACCGTAGAAATAATGTCGACTAAGCTTAAACTACAGTTTGATACGGCCGCTGATATCACAATTATATCGAAAGCAAATTGGGAAAAGCTTGGTAGCCCCAAATTACATCGATCCAGTCGCTTAGCATCGTGTGCACTGAAACAGCAAATTCCCATTTTAGGCGAATTCACATCAGCAGTACAACATAAACAAGCATCGCATAACAGAAGCATTTTCGTATGCAATCTTCATTATTTAAACGTATTTGGAATCGACTTGATGAACAAATCCGGGTATTGGGACAAGCCCATACAAGCAATCTGCAACACAGTGGCAGCACCATCAAATCACAAcgcaaatttaaaaatcaacaaagatgaACTCTTCACAGAAATTAGCAAGCAGTTTCCAACGGTATTACATACATCCACAAGACATTGTACACAATTTAAGGTCAAATTGGAAGTCAAAGCTAACGCAACTCCAGTGTTCAGGCCGAAACGCCTAGTTCCGTATGCATCACTACCAGCAGTAGAACAAGAGTTAAATCGATTACAAGAAGCCGATATCATCACGCCAATCACGCACTCAGAAAGGGCAGCACCGATAGTAGTGTTTGAAGTCGATGACGTATCAAAGAAGATGCTGACGATCAATACGCATAAAGGCCTATTTCAATTTAATCGTCTTCCACCGGGAGTAACTTCAGCACCTGGTGCTTTTCAAAAAGCAATCGAAACTGTTCTCGCCGGATTAGATGGAGTTATAGCATACTTAGACGACGTCATCATCGCAACGTCTACGCCACAGCAGAATTACAATTTAGTTATGCAAATCATGAAGCGGTTCCAAGAGCACAACCTTAGAATCAACTGGTCAAAAtgcgaaatttttaaaacaaccaTCAAATACCTTGGGCATGTCATAGACAGCAATGGAATTCATCCAGTTCCCGCAACAAATGTCTCGGAGCTACGTTCCTTCCTAGGAGCAGTAAACTATTAG
- Protein Sequence
- MKKAIHAVRKGDMGILLASKTFNVPHTTLQRMSRSEKPIAELLDTKLGRAPILTAAIEKDLVKYLLEIESRYSGLTRADVRSLGYQIAKKNNIPNKFSIIKECAGKEWLKGFLKRHQDVLTFLKPTGTSADRVREAPIENTSSIAVDTRVETMNLKETSVTTHSEIDPDIHCTYAKHKCKDCGNAQPNKNTQRGSNQRASNSRPNTQKKNYRAKVIAATASVHCIHNHMPQRKYITVEIMSTKLKLQFDTAADITIISKANWEKLGSPKLHRSSRLASCALKQQIPILGEFTSAVQHKQASHNRSIFVCNLHYLNVFGIDLMNKSGYWDKPIQAICNTVAAPSNHNANLKINKDELFTEISKQFPTVLHTSTRHCTQFKVKLEVKANATPVFRPKRLVPYASLPAVEQELNRLQEADIITPITHSERAAPIVVFEVDDVSKKMLTINTHKGLFQFNRLPPGVTSAPGAFQKAIETVLAGLDGVIAYLDDVIIATSTPQQNYNLVMQIMKRFQEHNLRINWSKCEIFKTTIKYLGHVIDSNGIHPVPATNVSELRSFLGAVNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -