Mwes030474.1
Basic Information
- Insect
- Merzomyia westermanni
- Gene Symbol
- bab2
- Assembly
- GCA_949987695.1
- Location
- OX465291.1:31341607-31344506[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.5e-14 1.3e-11 45.6 0.0 5 44 357 396 355 397 0.92 2 3 0.02 17 6.8 0.0 23 37 422 436 411 442 0.83 3 3 4.3e-17 3.8e-14 53.7 0.0 3 41 464 502 462 504 0.92
Sequence Information
- Coding Sequence
- ATGAATCACTTGAAGTGGATGGGCCATTCGGCAACAATATTCGATATACAAAGAAATCTGCGCGATGATCAGCAAAGTTGCGAGGTAACACTAGTGGCTAAAGGTCACTCGGTACGAGCCCATCGATTTGTTCTTTCATCATGTTCAGATTTGCTGCGCAATCTATTGGTGGACATTCCGATGGGCCAGGAGGCGACCATTATAGTGCCGGATATTAAAGGATCgcttttggaaagtgtattggcATTTATTTATGTTGGCGAAACAAGTTTGACATCGACTAATTTATCAGAATTCCTAGAAGCTATCAACACTTTGGGTATCAAATCAGCAATTAGTTTTGAATGTAGCAATGCCGCATTATCCGGTGCAGTACCCACAACAACATTACCATTGAAGTCATTAAGCAACATACAAATTGCGCACGAGGAGTTAATTGAACATCAAGAAAATGTAGCCACAGAGAAGATTGACACGCAAAATGTTATTCAAGACGAAAGAGAATTGGAATTTTTAGATGTTTATAATGAAGCTCAGCACAGCAAAATAACATATTCAATCGAACACATGCCGGTGTCGGGTACTGCTAATGAATATATTTTAACTGAAAATTCTGGTACATTCACTTTGACACAAAATAATAAACTTGAAAATGCATCGAATGCGTCCGATTCAGAAAAATTGGTTGAAATGGAAGATACAACAGATGATGGACAGATTATAGAAGAATATAGTAATACTACATGTAGTGCCCATTCCATAATTGAAATCAGTGCAAATTCTACTCCAAGCACAAGTACACCAAAAGTAACTGCCACGGCTACAAgttcacagcaacaacaacaaccattaaCAACTCAACCAATTATACAAATTAAAGCAGCACCAAAACTTAAAGCTGTCAAAGTTAAAACTGCAACTAGATCAACAGAAAATGAACAAATGCAGCAACACCACCACCATCAAGCAATGTATAATGCACTTGATCCCACAGCTGATCCGATTTCAGTATTAAAGACTGATGATACTTATGCAACAATAAGCGCCGCTTCCGTCCCTATAGATTCCCTATGTTATGCTGTACAGGCAGTAATAGAGGAAGGTATGAGTTTACAGAAAGCTGCACAAAAATTTGATCTCTCAAAAACGGTACTTTGGCGAAGAGTACGCAAACATCCACAATATATGAAAACGACACGTGAAAATCCTGTGCTTACGGCGGCCTATGAAAGATTGAAAGGTGGTGATTCGTTAAAGAATATTAGCCGCGAATTAGATATACCAATGTCAACGCTACACCGGCATAAAGTGCGCTTGGCACAGCAAGGCCGTTTGCCAGATTATGTATCATTTAAAAAACGTGATGTAAATtcgaaaatagaattaaaagataaattaacaAAGGCATTACATGCATGCGTGCATGAAGGTATGTCACAAAATCATGCGGCAAACTTATTTGACATACCGAAGAGTACTCTCTGGCGTCATTTGCAAAAACGAGTCGCTGAAGCAGAATTGTCACATAAGCTCGAACAAGAACAAGGCCTCATTAAGGAAGAAATTatactttcttaa
- Protein Sequence
- MNHLKWMGHSATIFDIQRNLRDDQQSCEVTLVAKGHSVRAHRFVLSSCSDLLRNLLVDIPMGQEATIIVPDIKGSLLESVLAFIYVGETSLTSTNLSEFLEAINTLGIKSAISFECSNAALSGAVPTTTLPLKSLSNIQIAHEELIEHQENVATEKIDTQNVIQDERELEFLDVYNEAQHSKITYSIEHMPVSGTANEYILTENSGTFTLTQNNKLENASNASDSEKLVEMEDTTDDGQIIEEYSNTTCSAHSIIEISANSTPSTSTPKVTATATSSQQQQQPLTTQPIIQIKAAPKLKAVKVKTATRSTENEQMQQHHHHQAMYNALDPTADPISVLKTDDTYATISAASVPIDSLCYAVQAVIEEGMSLQKAAQKFDLSKTVLWRRVRKHPQYMKTTRENPVLTAAYERLKGGDSLKNISRELDIPMSTLHRHKVRLAQQGRLPDYVSFKKRDVNSKIELKDKLTKALHACVHEGMSQNHAANLFDIPKSTLWRHLQKRVAEAELSHKLEQEQGLIKEEIILS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01357850;
- 90% Identity
- iTF_00992774; iTF_01357850; iTF_01358134;
- 80% Identity
- iTF_00992774;