Mwes050696.1
Basic Information
- Insect
- Merzomyia westermanni
- Gene Symbol
- retn
- Assembly
- GCA_949987695.1
- Location
- OX465293.1:81638695-81661860[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-19 8.3e-16 59.8 0.0 16 89 5 76 2 76 0.95 2 2 3.9 3.2e+04 -3.0 0.0 45 62 106 123 103 145 0.61
Sequence Information
- Coding Sequence
- ATGCGTGCTGGTTCAGGCACACCTATAAATCGTTTACCAATAATGGCAAAATCTGTGTTAGATTTATATGAATTATATAACTTAGTAATAGCGCGTGGCGGTCTCGTTGAtgttatcaataaaaaattatggcaAGAAATCATAAAAGGATTGCATTTACCATCGAGCATAACAAGTGCCGCATTCACACTACGAACACAgtatATGAAATATCTTTATCCCTACGAGTGCGACAAGAAAAACCTCAGTACACCCGCTGAGCTCCAAGCGGCTATAGATGGCAATCGTCGTGAGGGTCGACGCTCCAGTTATGGACAATATGAAGCTATGCACAATCAGATGCAATTGCCACAAATTGCACGCCAATCGCTACCAGGAGGCATGCAACAAATGTCCCCATTAGCACTTGTCACACACGCTGCGAATAATCAGCAAGCAGCCGCCGCTGCTGCCGCCGCAGCACACCACAGACTGATGGCGCCCACCTTCGGGCAAATGCCAAATTTAGTGACACACGAATTTGAGCAACGGATGATGGAATATTTGAAGCTGATACAAGTGAAGAAGGAGCAACAGAATAATGCCGCAGCAGCAGCAGCCGTAGCAGCGGCAGCGGCTGCTGGTGGCAATGCAGGCGTAGCGGATGCAAGCGGACGTTTGAGCGCTACAAGTCACGGAAGCGGCGGTGGTGGTGGTAATGGCGGCATGCACATCAAGCAGCAGCGTCAACGTTCACAAAGTCCCGAAATGAGCACGCGCGAGGCTATGAATGCTTTGGAAATGTCTCGCGTCGCTTTCTGGCAAATGTATCACCACAATACCAGCCCACCAGCGTCTATGAATGCGTCACCGCTCGGAAGTGCGGGTGGCGGTGGTGTTGGTAGCACAGGTGCCGCCGCGGGCCACGGTAGCGGTAATGGAACGCTCACCTTGGCGGGTTTAAGCGATCAACACAGTGAGGCTTTGAACCTTTCCGAATCACCACCAAATCTCAACAACATTAAACGTGAGCGTGAACGCGAACCATCACCGGATGCTTGCGACCGCAAAGATTTTCAACATCAACCACCACCGGCAAAACGTGGCGCCTCTGCTGGCCCACTCAACTTTCCTTCTAACTTTTATCTACCCACCAGCGTagcggcagcagcagcagcggcaGCTGCAAATTTCCAtcaacacaataacaacaataatatgtCGATGTCACAAGATTCCGAGGGTGAGGAAATTGATGAAGATTGCAATGTGCGACAAAACACATCCAATTCGTTGCCCCACCTTGGCGATGAGCATGAAAGACCAACAACCCTAAATGGACATgatcatcatcatcagcagcaTAATAATCGTCATCATTTGCCACACAATTTACAAAACCTGCCACATCATCAACATCTCAGCAATAGCACTAGTGGCAATCATGATAAATCTGATGATTCGGCCATCGAAAATTCACCCTCCACGAGTGCGGCTTCGGCTGTGTGCGGTGGTGGTAGCAGCAGCGTTAATGATAGTGGTGCGAATGGTGGACACATATCACCAGTGTCAACAAAGAAAATACACCTATCGAAGCAACAAAGTCTAAGTGGCGTATCGGCGTTGGACTGTGGTGTTGGTGGTGGCGCTGTACGTAGGCATTCGAGTAGTCCGAGCATGATGGGAAGCGTGGAAGATGCGTTGAATTTGTTATCGGGCATGCAATTTCGTGTGATGCGAAATGGCATTAACGAAAATGGCGAACCACAGTTGGTTGTTAATCTCGAATTAAATGGCGTGCAATACTCGGGAATGCTGATAGCTAATACCAGCGGTGTTACGAATGCCACAACAAACGCCGACTTAAATCAGAAAATAGAGAATCTGATGAATAAAAATGAGGATGCAACAGATACCGAGACAGCAGAACCAAAGGATGTGAGCGGTGTTAATAGTGGTGGTGATGCTGATATTGAAGATGAAGACATTGCTGATGCTGCGAGTCGAACTAGTACCGAAGACACGGCGCTGACAAAAGTAGCAACGACTAAGTCGTAA
- Protein Sequence
- MRAGSGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECDKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMQLPQIARQSLPGGMQQMSPLALVTHAANNQQAAAAAAAAAHHRLMAPTFGQMPNLVTHEFEQRMMEYLKLIQVKKEQQNNAAAAAAVAAAAAAGGNAGVADASGRLSATSHGSGGGGGNGGMHIKQQRQRSQSPEMSTREAMNALEMSRVAFWQMYHHNTSPPASMNASPLGSAGGGGVGSTGAAAGHGSGNGTLTLAGLSDQHSEALNLSESPPNLNNIKREREREPSPDACDRKDFQHQPPPAKRGASAGPLNFPSNFYLPTSVAAAAAAAAANFHQHNNNNNMSMSQDSEGEEIDEDCNVRQNTSNSLPHLGDEHERPTTLNGHDHHHQQHNNRHHLPHNLQNLPHHQHLSNSTSGNHDKSDDSAIENSPSTSAASAVCGGGSSSVNDSGANGGHISPVSTKKIHLSKQQSLSGVSALDCGVGGGAVRRHSSSPSMMGSVEDALNLLSGMQFRVMRNGINENGEPQLVVNLELNGVQYSGMLIANTSGVTNATTNADLNQKIENLMNKNEDATDTETAEPKDVSGVNSGGDADIEDEDIADAASRTSTEDTALTKVATTKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -