Basic Information

Gene Symbol
gata5-b
Assembly
GCA_958301585.1
Location
OY284413.1:43664501-43698543[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.3e-17 2.9e-13 50.7 3.7 1 34 767 799 767 801 0.97
2 2 5.1e-21 3.4e-17 63.3 3.7 1 36 821 855 821 855 0.98

Sequence Information

Coding Sequence
ATGAAACTACCAGTCGTAGTATCGCCTAAGCGTCATAGCACTACCCGCAAcaccaacaataacaacaacaacaataatgacGGACAAAGTAGGGATCTAAATAGTCTACCAGCGAATAGCAATGTCTCATTAGCAACATCGAACAACAACAATTCGTCATTATCCTCAGCCAATACCATCATGCAGTCCGACTGTGGAGGGGTAATGAATCTAGGCAACGACCAAGGATCACTTCTCATGCACCACCAACACCGACACAAtcatcagcaacagcagcaatttAAATATGCACCCACACATGGGCAACGATCGCCGTCCACTTCGTCCTCAACATCGTCACCGTCACAGGCGTCGTTCACAGCTACAGCAAGTACAGAACCACCACCAACCACCACAACGTCCGCAGCCATGTCAAACGCGACATTGAGCACGACGATCGTATCAGTTGCCAGCGAAACACCAAACCAAACAGTTTTATGCTGCAAGACCGAACCAGGCTTGGATGTCGAATCGTGTTCAACAACGTCATCAGCGTCgacatcagcagcagcagcagtagcGACAGTTGTGTCGAAAAGTATCTTATCACCGCAAACAAGTGTAATTGGCGGCAATAGTGCTAGTGGTAGTGTGTTATCAGTGttacaacaacatcaacaatcatcCGTATCGGCACAGACGCCGACTCCGACCATATCTGTTATTAGTGGTGTGTCAGTGATCGAGAATTTGCAAAAAGACTCGGGCGACAATAGTAACGTCACCGATAGTAGTGTCATCTTGCGATTGAATAACAATTCGAATTCGAATAACAACAATTCGAACGGTAACAGTGAAAGTGCCGAGAACATCATTCTCCTATCGCCAAACGAGACATCGAGTGCCGTACAGAATCTACCGATCGGTTATCGCGGCTCCAACAACACAGTGATCATTTCGAGTAATCGTTTGCAACAACAATTGGAGCAGGGCCAAGCGGCACAGACCACGCTGCATTACGCCGAGCTGCAGCACCAACAGTATCCGGCGCGGTACACGAACATTTCGCCCGCGAATTTAGCAAACCTGAGCGATCAAAGCGATCAGTATCTGAATCTCAACAACAGTATGCCCCCGTATAATTGGGCGTACGACTTGTCGCTGAATCATAAGGACGCCGACAGCACCAAGCTCGTGGTGGAGCACCATCAAACGCAGCATCATAACCAGCAACACCACCAGCACACGCAGGACATACTGCTGACAACCGCATCACAGGCGGCCCTCGATCAGATTACCATGCGAAATAATCTGGCTTTATACTCAGCATACGGCGGTGTGGCGACGGAGCATATGCATGCGACGACGGCAGCATCGATTGTGGACAATGCCACGCCGAGTAGCATTGACGAAGTGATCCAGGACACGCTGAAGGACGAGACGTGTTCGATGGTCGATGAGCATCATCTGGGCGGTGGCGGATCGGGTGGCAGTGCCAACGGCGAGGCGACTAGCTATCTAACTCTGACAAGCGGAGGTGAATTgcatcatcatcagcaacaacatcatcatcaccatcagcaacagcaacaacaacagcaacagcaccatcatcatcatcaccatcagcagcagcatcacCAGCAACAGCATAATAACTCAACAAGTAGCGGCGGCGAATCGCCGCACGACAGCGATGTGGGTCTGCAGAGCTTCACGCAGCTGACGAATGCAACGCATCGTGAGGGTATCTACGGCAGTGTGACGCCCGAGCATACTCTGATTCATTCAGTGAATGACTTTGAGGCACTAAGCCCCGGCTTGACAACAGGCTCAGTTTATGGCAGACCCCTACTCAACTCAACAGCAAATGGTATGCAATACCTGAACGAAAGTCCAACGCATGACAATTCTCACATGTGGTCCAGTACTGCCTCGAACCTGATCTCACCGTCAGGTGGACGTGCAAGCACAGCTTCGGACGAATACGATCCATCGAAAACGGGCGGCGGAACGTTGCCCGCATTCCAGCGGATAGCCTCTGGTGTGAATGGAAACTTTATAACCACCACTGGACGTGTTTCAAATCAATATACGCCATTGACCAGTTTCCGCACTCAGAATGACAGTGGCAATTGGCAGGGACACTTTGAGCCAATCAGCTATGCTACAGCAAATACCACGATAGCTGGAACTATCAGTTCGAACCTGAATTCTCGCGGTCGAACCGGGAATGATTCAGCAGCGACACATTTGCCAGCCTCGGCCTCGTTATCAGCAAcaTTTTTCGACGCCGACTTTTTCACTGAGGGGCGTGAATGTGTGAATTGTGGTGCTATATCAACCCCATTATGGCGACGCGATAATACCGGACATTACTTATGCAATGCCTGCGGTCTCTATCATAAAATGAACGGAATGAATCGACCCTTAGTTAAACAGCCTAGAAGATTGAGTGCATCACGTCGGTCGGGACTTTCATGTTCTAATTGTCACACCAGTCAAACGTCTCTGTGGCGACGCAATCCGAATGGTGAACCAGTTTGCAATGCATGTGGACTCTATTTCAAGCTGCATGGCGTTAAACGCCCTCAAACCATGAAGAAAGACACTATTCAGACAAGAAAACGCAAACCAAAGGGAAGTAAAAATGCTGATAAATCCTCCTCTGCCGCGAACAGTAGCAAGAACTCAAGCAACTTAACGAGCATTCAAGAAAGTACTAATGAACTAAAATCTTTGACATCATCGATTCAACACACAAGCACGCTGAGCCACTCGAATGCCAGTAGTCCGACAACAATATCCCCACCACCTCCTTTGGCTCATACGCCAACAACATCATCAGCCTCGTCACACCATCAAGCCGTCACGCCCGGAACTCCATCATCTCCCATCAACCAACACGACAACATGTCGCCATTACATTACACTTCTTCCTCGATGCTCAATGGTTCTTCACCAGCATCCCTAACCTCGAccgccaacaacaacaataccaCCAGCCAGAACAACAACCTCATCGCCCCAAACATCAAATATATGCAAAAATACCTATCTATCCACCAGgaaccgcaacaacaacaacacctaaTGTCATCCGCACATCAAATGTTCGACATGTCACCATCGCCAACCGAACAACAACATCACGCCTACACGCCATCGCACTCGCCCAACTATTTTTACGATCAACTGACCGATCACGATACCATCAAAATCGAGAATCTCCACCACCAGCACTCGCAcaaccagcaacaacaacagccacaacatcatcatcaccagGCCTCCCAGATCATCATGAGCCGTCAATCGTCCATCGATGACAGTTACGACATGCGTCAACGCCAACATCATAACATACTTCAAAATCAACTGAACGTATTCGATCTTGATCGGAAGCTGGACCGCTCGCCAGTCGTTAAAATGGAATAG
Protein Sequence
MKLPVVVSPKRHSTTRNTNNNNNNNNDGQSRDLNSLPANSNVSLATSNNNNSSLSSANTIMQSDCGGVMNLGNDQGSLLMHHQHRHNHQQQQQFKYAPTHGQRSPSTSSSTSSPSQASFTATASTEPPPTTTTSAAMSNATLSTTIVSVASETPNQTVLCCKTEPGLDVESCSTTSSASTSAAAAVATVVSKSILSPQTSVIGGNSASGSVLSVLQQHQQSSVSAQTPTPTISVISGVSVIENLQKDSGDNSNVTDSSVILRLNNNSNSNNNNSNGNSESAENIILLSPNETSSAVQNLPIGYRGSNNTVIISSNRLQQQLEQGQAAQTTLHYAELQHQQYPARYTNISPANLANLSDQSDQYLNLNNSMPPYNWAYDLSLNHKDADSTKLVVEHHQTQHHNQQHHQHTQDILLTTASQAALDQITMRNNLALYSAYGGVATEHMHATTAASIVDNATPSSIDEVIQDTLKDETCSMVDEHHLGGGGSGGSANGEATSYLTLTSGGELHHHQQQHHHHHQQQQQQQQQHHHHHHHQQQHHQQQHNNSTSSGGESPHDSDVGLQSFTQLTNATHREGIYGSVTPEHTLIHSVNDFEALSPGLTTGSVYGRPLLNSTANGMQYLNESPTHDNSHMWSSTASNLISPSGGRASTASDEYDPSKTGGGTLPAFQRIASGVNGNFITTTGRVSNQYTPLTSFRTQNDSGNWQGHFEPISYATANTTIAGTISSNLNSRGRTGNDSAATHLPASASLSATFFDADFFTEGRECVNCGAISTPLWRRDNTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRSGLSCSNCHTSQTSLWRRNPNGEPVCNACGLYFKLHGVKRPQTMKKDTIQTRKRKPKGSKNADKSSSAANSSKNSSNLTSIQESTNELKSLTSSIQHTSTLSHSNASSPTTISPPPPLAHTPTTSSASSHHQAVTPGTPSSPINQHDNMSPLHYTSSSMLNGSSPASLTSTANNNNTTSQNNNLIAPNIKYMQKYLSIHQEPQQQQHLMSSAHQMFDMSPSPTEQQHHAYTPSHSPNYFYDQLTDHDTIKIENLHHQHSHNQQQQQPQHHHHQASQIIMSRQSSIDDSYDMRQRQHHNILQNQLNVFDLDRKLDRSPVVKME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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