Basic Information

Insect: Merodon equestris
Gene Symbol: ci
Assembly: GCA_958301585.1
Location: OY284418.1:12115069-12134494[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.0013 0.28 13.2 0.4 3 23 427 450 425 450 0.94

2 5 0.083 18 7.5 0.2 1 23 458 485 458 485 0.84

3 5 0.016 3.5 9.8 5.0 1 23 491 515 491 515 0.97

4 5 0.00026 0.057 15.4 0.4 1 23 521 546 521 546 0.97

5 5 6.2e-06 0.0013 20.5 0.3 1 23 552 577 552 577 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.0013	0.28	13.2	0.4	3	23	427	450	425	450	0.94
2	5	0.083	18	7.5	0.2	1	23	458	485	458	485	0.84
3	5	0.016	3.5	9.8	5.0	1	23	491	515	491	515	0.97
4	5	0.00026	0.057	15.4	0.4	1	23	521	546	521	546	0.97
5	5	6.2e-06	0.0013	20.5	0.3	1	23	552	577	552	577	0.97

Sequence Information

Coding Sequence: ATGGCGAACATCAGAGGAACAGTGATTAGTAAGCGGAGATTACTACCACTCTCTCACTCTCATAAGGTCGAAGTACGAGTTGAAGCGGCTGTGGTTGCGGCAAAAGAACGGACCAAGGAAAAGTATCTAAACCGGTGGAACACAGAGAGAAAATGGTCTGTGAGACTAATTCTAGACAGTCCAGCAGCATGGACTGAGCGGGAATATGGTGAAGTTAACTACTATTACCTTTATAGAAGGGGGAAGAGACAGACTCCAGCTTGCCAGTATGGTAACTTAGAGGTCGACGATGCTTATCATACATTCGTCGTCTGTAGAGCAGAAGTCTATGCTAGAGGTGGAGATCTGCAGTTCCTGGCATCGAGACGTGCAGCTGCTGTAGCTGCTGCTACCACTGTTttgccaccaccaccaccaccgccaccaCCAGCAACAACGAATAATGGGCAAACTGCATTGTCGCAACCTCCACAGCCACATGACTTCCATCCAGCTTATAGGATTCCGGGTTACATAGACCACATTTACACTTTACAAAGAGCAAGTCCCACTGCATCATTTCATGGGCTTGGCCTGAATTCGGATTATCTGGGAACTCGTGGGCCATTAGGTGACATTCATCCGCAAAGTTCATTAGCAAGTGCCGATTTTCACTTTAGCATGGATGGATCACGATTAAACAGTCCCCGTCCCAACAGTATTAGAGCCAGTATAAGTCGAAAAAGGGCTCTTTCCACTTCACCATATTCAGATTCGTTCGATATTAATTCAATGATACGATTTTCACCCAACTCACTAGCTAATATTGTAAATGGTTCAAGAAATAGTAGTACCAGTGGATCGTATGGACATTTATCGGCCGGCGCTATGAGTCCTACCATAGGGATGCATAGCAGCATGACACCACATTTGCAACAGCTTCAAGCTCATCTGCTCCGTGCTGGAGCTGGACTATTGCATCCGATTCCTTCACATCATACGTCGCCAAGTACCGGAATGTTTTCAATTGGTCATCATCAACTGCCAGGTTGTGGAAATTCTCTTTCGAAATCGCACTTCGATGAGTTCCCTCCGAAGAATATGGATCAACCTTCTTCAACTTCAAGTATAGTTGCGCAGGTTGAAGCAGACAGTGCATCGAATGCCTTGGCGACTGCAGGTGCCAGACGGAATCGTTGTAAGCGTGAATCTTCATTTTTGGTCAATAGTGAGAATGAGACGACCATTGTTGATACAACTGATATCAAGGACGAACCTGGCGATTTCGTCGAAACTAATTGCCACTGGCGCGATTGTGGTATTGAATTCATGACGCAAGAAGAGTTAGTAAAGCACATTAACAACGATCACATTCAAGCAAATAAGAAGTCATTTGTATGCCGTTGGGAAGACTGTTCACGTGACGAGAAACCATTTAAGGCACAATATATGCTCGTTGTGCACATGAGACGGCATACTGGAGAGAAACCTCATAAGTGCACGttTGAAGGATGTTGTAAAGCATATTCCCGATTAGAGAATTTAAAGACTCATCTACGGTCGCATACAGGAGAGAAACCGTATACTTGTGAATATCCTGGATGCAGTAAAGCATTTAGTAACGCCTCCGACCGTGCAAAACATCAAAATCGGACACACAGTAATGAGAAACCATATGTCTGTAAAGCACCAGGATGTACAAAACGATACACCGATCCTAGTTCCCTTCGAAAGCACGTCAAGACAGTCCATGGGGCCGAGTTTTAcgcaaataaaaaacataaaggaGCTTCAAATAGTGGGAAAGATGATGGGACGCGGTTTGGCATTAATCACAATCAGATTGATTCCAGTCCGCGTAGCGAAGATCTACAATCTGCTAAAACAACTAGCTTATCTAGTCCGAGCGTCAAGTCTGAATCAGAAGCAAATTCTCCGGCACATCCACCTATAAGCAGTCCAATAAGCACCTCGCATATGCATAAGGGAGTTATTGATGACTACGACTGCATGTCATCAAACATGGTTAACACCCCAATCAACGAGGCAGCTTTGGCGGCAGACGACAACATATGGTCAtatgaagatgaagatttgGATGTTTCCGAATTACCTATAGTACTTCGTACCATGGTTGGCATCGGAGGAAGCGGAAACAGTGTCGGAGGGGGAGGCGGAGTAACGAGTACCCGTCAACGTTTCCGCAGTCGTTTGCAATCGAAAGGAATTAATTCGTCGTTATCAAACATTCCTGAGATGAATCGTTGCAACCTCGGTTTAGGTGAATTGAATCAAAGAATCACTGATCTAAAAATGGAGCCTGGCACTCCTACCACTATTATTACTCCGAAACTATGTTCATCACAAACGACTCATATAACCGAATTGCCATCTCGCCATCAATACTTACAAAGCACCCAGCATCCTCTACTACGCAGAGACAGCAATAACTCGAATGCTAGTACCTATTATTGCAGTATGCGATCGATAGATATAAGTCGGCGAAGCAGTCAAGCATCTCAGTTATCATCGATTTCCACGATGAGACCTCCATACAACACCGGATCCTTTTATGATCCAATATCGCCAGGCTGCTCTCGTCGTTCTAGTCAAACATCAATTGTAGCCACTCATGGGCACAGTTTACCACCACCCCCATCGTCCCATTTAATTTCCACCCACTTGCAACGTTTGCATAACAACAACATGATATACGTGTCGAGTAGTAATCGTCAACATGGTCGATTCTCTATCCCTAATCTTTCAACTCAgaattttaacaacaataatGTAGTACAGAGCTCAATAGATCGTCGTCGTCAGTCAGAGCCCGCGATAAATCAGAGTTCAGAACATATGTTGGGAACATCATCATCAAACCTTATTAAAAGTAAGCATTATTCCTCGAATACTTCAAGAGATCATCATCCAAATGAAGAAGTCAATCTTGATGAAGTGGAAGAGGATGAAATGGTTGAGAACAAGCTTGTCATTCCCGATGAAATGCTTCAGTATCTCAATCAAGTCGCTGATAAAACCGGTGCCACCTTACTCTcacaaataaatgaacaaaattatattgGCACTGTCTCAAGTTCATTTCATGAAACTCAACAGGAACAATGCTCGTCAAGAGTTCCAATAATCCCCGCAGATAACGAAGCAAATTTAGACAGCCATCGCATGTTTTCATCACAAATCGTACAAGACGCTTCTGTTAATCCCGTTTACAATCCGAACGTTGAAACTCTTGTCCCTATGTACCGGACTCAGTATCAACCACAGAGCGCCCCGCTCATTTATTTTGCTAATCATCAATGTCTACAGCATGGGCAACCAAATGCGGGAAATAATATGACCATGTTCTGCAATCAAGGCACCGCTCATCTACAACGAGCACAGAGGTCAGAGCAACAGTGTAATAATGTACCCGGCAACTATCATCATTCAGAACCTACCGTGTCTACTTGTACAGTCAGTGATGACCCATTAACTGCACCTGAGAGCAGTTGTAATGCACCATTGACCTCTAAGCCTTCGTGTTTTCCAGATTTGCAAAGCCAAAACTTAGATGTATCTCAACAGGGCCAAATATATGACATACATTCGCAACACCAACGAATACCtcaaatcaaagaaattcagTGTGGAGACATCAGTCAGTCACAAATATCGCCAGGAATCGTCCCGACATTGCTATCTTCTGAGGCAAAAATCAGTAGCAGAACTACTGCGCCCATGACAATATCTGCTAATCCTATGACTATGTCCAAGCCTATTGGAGTCATACAAACGGATTCAACCAACGCGGACAGTAACATGAAGCAGGACACCTACCAACGTACCCTCGAGTATGTACAAAACTGTCAGAACTGGCTTGAAAACACTTCACAAATTGTAACCAGCTCTACCCACCCTAATTCAAACATGATTATCAACGATATGACGACATCGCTAAGTTCGCTTTTGGAGGAGAACCGGTTCCTTCACATGATACAGTGA
Protein Sequence: MANIRGTVISKRRLLPLSHSHKVEVRVEAAVVAAKERTKEKYLNRWNTERKWSVRLILDSPAAWTEREYGEVNYYYLYRRGKRQTPACQYGNLEVDDAYHTFVVCRAEVYARGGDLQFLASRRAAAVAAATTVLPPPPPPPPPATTNNGQTALSQPPQPHDFHPAYRIPGYIDHIYTLQRASPTASFHGLGLNSDYLGTRGPLGDIHPQSSLASADFHFSMDGSRLNSPRPNSIRASISRKRALSTSPYSDSFDINSMIRFSPNSLANIVNGSRNSSTSGSYGHLSAGAMSPTIGMHSSMTPHLQQLQAHLLRAGAGLLHPIPSHHTSPSTGMFSIGHHQLPGCGNSLSKSHFDEFPPKNMDQPSSTSSIVAQVEADSASNALATAGARRNRCKRESSFLVNSENETTIVDTTDIKDEPGDFVETNCHWRDCGIEFMTQEELVKHINNDHIQANKKSFVCRWEDCSRDEKPFKAQYMLVVHMRRHTGEKPHKCTFEGCCKAYSRLENLKTHLRSHTGEKPYTCEYPGCSKAFSNASDRAKHQNRTHSNEKPYVCKAPGCTKRYTDPSSLRKHVKTVHGAEFYANKKHKGASNSGKDDGTRFGINHNQIDSSPRSEDLQSAKTTSLSSPSVKSESEANSPAHPPISSPISTSHMHKGVIDDYDCMSSNMVNTPINEAALAADDNIWSYEDEDLDVSELPIVLRTMVGIGGSGNSVGGGGGVTSTRQRFRSRLQSKGINSSLSNIPEMNRCNLGLGELNQRITDLKMEPGTPTTIITPKLCSSQTTHITELPSRHQYLQSTQHPLLRRDSNNSNASTYYCSMRSIDISRRSSQASQLSSISTMRPPYNTGSFYDPISPGCSRRSSQTSIVATHGHSLPPPPSSHLISTHLQRLHNNNMIYVSSSNRQHGRFSIPNLSTQNFNNNNVVQSSIDRRRQSEPAINQSSEHMLGTSSSNLIKSKHYSSNTSRDHHPNEEVNLDEVEEDEMVENKLVIPDEMLQYLNQVADKTGATLLSQINEQNYIGTVSSSFHETQQEQCSSRVPIIPADNEANLDSHRMFSSQIVQDASVNPVYNPNVETLVPMYRTQYQPQSAPLIYFANHQCLQHGQPNAGNNMTMFCNQGTAHLQRAQRSEQQCNNVPGNYHHSEPTVSTCTVSDDPLTAPESSCNAPLTSKPSCFPDLQSQNLDVSQQGQIYDIHSQHQRIPQIKEIQCGDISQSQISPGIVPTLLSSEAKISSRTTAPMTISANPMTMSKPIGVIQTDSTNADSNMKQDTYQRTLEYVQNCQNWLENTSQIVTSSTHPNSNMIINDMTTSLSSLLEENRFLHMIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -