Basic Information

Insect: Merodon equestris
Gene Symbol: -
Assembly: GCA_958301585.1
Location: OY284417.1:4594793-4600080[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.01 2.3 10.4 0.1 3 23 108 128 107 128 0.94

2 9 2e-06 0.00043 22.1 0.6 1 23 177 199 177 199 0.98

3 9 1.7e-05 0.0037 19.2 0.6 1 21 204 224 204 225 0.95

4 9 0.00027 0.059 15.4 1.4 1 23 468 491 468 491 0.96

5 9 0.16 34 6.6 0.3 2 21 519 538 518 541 0.88

6 9 0.00039 0.085 14.9 0.6 1 21 553 573 553 574 0.96

7 9 2.5e-05 0.0055 18.6 4.2 1 23 582 604 582 604 0.96

8 9 1.2e-06 0.00027 22.7 4.2 1 23 610 632 610 632 0.98

9 9 4.9e-06 0.0011 20.8 1.7 1 23 638 660 638 660 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.01	2.3	10.4	0.1	3	23	108	128	107	128	0.94
2	9	2e-06	0.00043	22.1	0.6	1	23	177	199	177	199	0.98
3	9	1.7e-05	0.0037	19.2	0.6	1	21	204	224	204	225	0.95
4	9	0.00027	0.059	15.4	1.4	1	23	468	491	468	491	0.96
5	9	0.16	34	6.6	0.3	2	21	519	538	518	541	0.88
6	9	0.00039	0.085	14.9	0.6	1	21	553	573	553	574	0.96
7	9	2.5e-05	0.0055	18.6	4.2	1	23	582	604	582	604	0.96
8	9	1.2e-06	0.00027	22.7	4.2	1	23	610	632	610	632	0.98
9	9	4.9e-06	0.0011	20.8	1.7	1	23	638	660	638	660	0.98

Sequence Information

Coding Sequence: ATGGAAGACGTTGTAATTAAAACCGAGCCTTTGGATGATGAATTTCCGTCGATCGGGACCGAGGAGCTTATTATCAAAACCGAAGGTGATGATGCGTCTTCGACAAATAACCCAGCGGTGCCTGAACTTCCATTGGATACGCCATTTGTCACAATAATTCCAAAGAGCGAACCTTTGGATGACTATGAAAACCTCGCCCCGATCAATTCTTTCATAGAATTGCTCTCACCTACACCCAACCCACCtgttaaaacaaagaaatttgtCACCAAAAAGGTACAAGCCAACTCGCGGAGTTTGAGATGTCGCAACCTGAACGCATGTCCCGAATGCAATCAAGTCTTCAGAACATACGTGATCCTTCAGGATCATCTCGAGCAACATCGAAtccaaaaagcgaaaaaagtctCCCCGAGCAAGGAGAAAACGTCGCCCAAAGCAGGGCGTGCCATTTCCAAATCAAATTCCAAGTTAAGTCCCAAGCAGAGTCCTGATATTCTAGCCAAGTCATATGAGCATCCAAAGTTCTATTCATGCAACGTTTGCGATATGACATTTTCCAGCCCAAAGGGTCTACGCAGCCACAAACGCGTGCACAATGGCAAGAAATATGTGTGCGATCAGTGTGGACGGTCATTCACGTACTCGATGCAGCTGAAACAGCACAAAAAGGGAAACATTTGCATGACTGAAGCCGGGGAGGAGATTATAAGTTTTCCCGAAATTGACCTTAGTATTAAGAAAGAAGTTTTAAGTGATAAAGAAGAAACCTCGATACCTGCCGTGGAAAGCGGTGAAGTGGAGAACAAACCTGTAATTAAGCAAGAACCTTCCGAAAACAATACTCAAAATGTGCCAACACCTGTCATCAAACAAGAACCCGACGATTCTGAAGATGACCAGTCTTCCGATTCCAACAAGGATTACGACGAACTCTTACTGCAAGAACTTATCGATCGTAAAGCGAGATCGATTGCCAACCAAAAGGCAGCCATGCTAAACCAAAAATCTTCCCTCGATACAAGCATCAAGCGGGagccttcattttcggaaacctcATCCAACCAATCCGTTGGCATACCAATGCCGATTAAACGGAAGTTAACCAACGAGTCCTTATCCGACGATATGAATCGCAGTTCTGCCTCGCAATCGGACTCGCAACACCATGACGACTTCGAGGACATGATCGCTAGTAATACgcttttaaatttccaaaacaAACGCGACGTCATCAATAGTCTCAAAGAGGAATATCAAAAggcgaagaagaagaaaatgctTGACGACAACAATCAGGAGGAGGACGAAACGAAAAGGCCGCGATCACTCTACACGACGTTGACCAACATCCCCGAAGATCTTACTTTCACCGCAGGTGGGAACCGATATCGCTACGTTTTCGTATGCTCGATCTGCCCGCGTCGTTACGTCCAGCGTCATGGATTTCTTCGACACCTTCTCAGCAGTCATACGGAGAGTATTCTCGAACCCAATATGCAGAGATTCGAATTGCGTCCTGAGTTGTGTTCGACTAAATTATCGATGGACACGTATTGTTTTGTGTGTCGAGTGACATTGGTCGATAGTGATTCGTTGAAGAAACACAACGAAGAAGTTCATAAAATGGATGGTGCCCCGGCGAGCACGGTACAGTATCAATGTGAGAAATGCGGCAAGTATTGTTCAACGCGTGGCTTCTTGGCCGATCACATTCAGGCGAATTGTGGCAGGGAACCGCAGTACAAATGCGATGAGTGTGGGAAAAAGTTTCACACGAAGAGTACACTGAATTTGCATAAGACTTTGCATACGGGTGTGCTGCCGCATAAGTGTGGATATTGTGAGAAGCGATTCCGCACCAAAGGCCAGTTGACTGTACATACGAGAACGCATACCGGCGAGCGGCCATTCCCGTGTAAGGTCTGTGACCGTCGATTCACGCACCGCGAAACCCTAATCGCCCATCTCTCGCGTCACATCGACATGAAACGCTACAAATGTTACGCCTGTTCAATGCTCTTCTCATGTATCTCAGGTTTAAAAACCCACCGCATCACACGCATGAACACTTGCGGTCGAGTTAAATTGAATGCCCGCCCCGTAGGACCACGCGTTCGTGTTATCCGGGGCAACGTAATCTTCGAGCCACAACCGAAAATTAATCCCTACTTCCGTGGTGTCGACGAAAAAGACACGCCGGAGAGCCAAAAGGACCAAATGAACGAGGAAAACGAAGCGAATCAGGAAAACCAAGAGAACGTCTTTAACGTCGTCGCCGAAACCATGAAGGACGGCGCAATGTGA
Protein Sequence: MEDVVIKTEPLDDEFPSIGTEELIIKTEGDDASSTNNPAVPELPLDTPFVTIIPKSEPLDDYENLAPINSFIELLSPTPNPPVKTKKFVTKKVQANSRSLRCRNLNACPECNQVFRTYVILQDHLEQHRIQKAKKVSPSKEKTSPKAGRAISKSNSKLSPKQSPDILAKSYEHPKFYSCNVCDMTFSSPKGLRSHKRVHNGKKYVCDQCGRSFTYSMQLKQHKKGNICMTEAGEEIISFPEIDLSIKKEVLSDKEETSIPAVESGEVENKPVIKQEPSENNTQNVPTPVIKQEPDDSEDDQSSDSNKDYDELLLQELIDRKARSIANQKAAMLNQKSSLDTSIKREPSFSETSSNQSVGIPMPIKRKLTNESLSDDMNRSSASQSDSQHHDDFEDMIASNTLLNFQNKRDVINSLKEEYQKAKKKKMLDDNNQEEDETKRPRSLYTTLTNIPEDLTFTAGGNRYRYVFVCSICPRRYVQRHGFLRHLLSSHTESILEPNMQRFELRPELCSTKLSMDTYCFVCRVTLVDSDSLKKHNEEVHKMDGAPASTVQYQCEKCGKYCSTRGFLADHIQANCGREPQYKCDECGKKFHTKSTLNLHKTLHTGVLPHKCGYCEKRFRTKGQLTVHTRTHTGERPFPCKVCDRRFTHRETLIAHLSRHIDMKRYKCYACSMLFSCISGLKTHRITRMNTCGRVKLNARPVGPRVRVIRGNVIFEPQPKINPYFRGVDEKDTPESQKDQMNEENEANQENQENVFNVVAETMKDGAM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -