Basic Information

Insect: Merodon equestris
Gene Symbol: -
Assembly: GCA_958301585.1
Location: OY284415.1:12867466-12869492[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.011 2.5 10.3 0.4 2 23 220 241 219 241 0.96

2 12 0.00039 0.086 14.8 1.6 2 23 250 271 250 271 0.95

3 12 0.0011 0.24 13.4 2.3 1 23 286 308 286 308 0.98

4 12 0.0041 0.9 11.6 1.4 1 19 314 332 314 337 0.94

5 12 1.8 3.9e+02 3.3 5.8 2 23 352 372 351 372 0.96

6 12 0.00087 0.19 13.8 1.5 1 23 378 400 378 400 0.95

7 12 0.0039 0.85 11.7 3.8 1 23 405 428 405 428 0.95

8 12 3e-07 6.5e-05 24.7 0.6 1 23 435 457 435 457 0.99

9 12 1.3e-05 0.0027 19.6 4.4 1 23 463 485 463 485 0.98

10 12 3.5e-07 7.6e-05 24.4 3.7 1 23 491 514 491 514 0.98

11 12 0.00022 0.049 15.6 3.1 1 23 519 541 519 541 0.97

12 12 0.44 96 5.2 0.1 1 23 546 569 546 569 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.011	2.5	10.3	0.4	2	23	220	241	219	241	0.96
2	12	0.00039	0.086	14.8	1.6	2	23	250	271	250	271	0.95
3	12	0.0011	0.24	13.4	2.3	1	23	286	308	286	308	0.98
4	12	0.0041	0.9	11.6	1.4	1	19	314	332	314	337	0.94
5	12	1.8	3.9e+02	3.3	5.8	2	23	352	372	351	372	0.96
6	12	0.00087	0.19	13.8	1.5	1	23	378	400	378	400	0.95
7	12	0.0039	0.85	11.7	3.8	1	23	405	428	405	428	0.95
8	12	3e-07	6.5e-05	24.7	0.6	1	23	435	457	435	457	0.99
9	12	1.3e-05	0.0027	19.6	4.4	1	23	463	485	463	485	0.98
10	12	3.5e-07	7.6e-05	24.4	3.7	1	23	491	514	491	514	0.98
11	12	0.00022	0.049	15.6	3.1	1	23	519	541	519	541	0.97
12	12	0.44	96	5.2	0.1	1	23	546	569	546	569	0.91

Sequence Information

Coding Sequence: ATGGAAGATCCACCAGATGTTGAAACGGTGCTCGTTAAATTAGAGTCCACTCTACCGATTTGCCGGGTTTGCCTGGACATATCGATGGAATATATCGAATTTGAAGGACCTCTCTGCGTCGTGAATGGCCAAGAAATTACTTATTCCGATGCCTTCAACGAGCTATCTTCGCCTATAATTGATTTGCCGGACAAATCACCCACGAATTTCTGCGTAACATGTGGCCAGGATTTGCTTAATGCGTATATGTTTCTAAAACGCGTGGAAAATGCCAATTTCATTCTAAGCAAAGCAAAGTTCATCTCTGAAAACAATTCGAAATGCAATCTGAAAGATAAAGAGCTCAATACGGAGCTGCCGCAGGATTCCATTGAGAATTTCAAGGTTGAAATATATCCATATCTACAAGAGAACGAGTTTTCTAAATTTATTGACTTCGAAATGGATTCCAAAAGTGTGCTTAATTCTGAAAAATGTGAAGACCAAAATAAACCAGAATCGGATATGTACTTCAATGAGCCATCTTCCAAGTTAACTCCAAAATCCAATCCACAGGAAGATGTGCATGATACGCTAGAGGCAATAAAAACGAATTCTCCAAACACGGAAAAAAGTTCAGACGACGAGAACGATATTGCTGACGATAGTAAAGCTTGGATGTGCGATGAATGCGGCGTAATATGTGACTCGGAGAAGCTACTGACCGATCATCgggaaaaacatcaaaaaagttCTGATCCGTCGGGCAGATGTGTGCATTGCAGTAAAACATTTTCTACGAGCGCCGAACTTGATGATCACCTTCTATTCCACGAATATTCGAAACTCGTGGAGGCTGCTTCAGATCGAATGGTTCACCAATGCATGCTGTGCGATAAAACGTGCCGCACTGAAATCGAATTCATCGACCACATCAACGTGCACCGAGATATTCGGCCGTACATTTGCACCATATGCTCAAATGCTTTCCACACGAAATATAATCTTCGTCTTCACAAATGGCGCGTTCATAACAATCACGCTCTAAAGAgacgaaaaggaaaagaatatgACAAGTGTCACCATTGCCAGCGCGTTATAAAAATTTCCCATATGGAACGACATACGGCGACGCATACAGCGGAGAGAAATTTTTCCTGCGCTGATTGTGGAAAGAAGTTCCTAACGAAATATGGATTAAAAACGCACTCCACAAGCCACAGACAACGTGAATTCACGTGtaacatatgcaacaaaatcTGCTTCACCGATTTCACCTTACGAAAGCACATTCAGTTCATTCACATGTCCGATCGGAAGAAATATCAGTGTGAAGACTGTGGGCTGGTTTTCCAATACCCATCGTATCTGAAAGATCATCAAAGGAAGCATAACACGAAAAACAGATTCCAGTGTCCGCATTGCGACAGGTCGTACTGCAGGAAACCGCAATTAGACATTCATTTACGGTATCACAATAACGATTTCCGGTACAAGTGTGAACAGTGCGATAAGTGTTATGTGACGAAGAGCAACTTGACGGACCATATCAAGTCCAGGCATACGCAGATCACATATGATTGTGATAAATGTAACCAAAAATTCAAGTCGCTTACAGGTCTCAGAAAACATAAATATACACACACGGGCTATCCGTACATATGCCCACTGTGCACCGTGGGACAAACCTCACGATCTGGTATGAAAGCTCACATGTTCGGGGTGCATCGGGATGCTGTGACAGAAGAGGAATTTAACGAAATGTTTCCAATAATTATTCCGAAAAGTGGTTACCGCCGACCAAAAGCTtaa
Protein Sequence: MEDPPDVETVLVKLESTLPICRVCLDISMEYIEFEGPLCVVNGQEITYSDAFNELSSPIIDLPDKSPTNFCVTCGQDLLNAYMFLKRVENANFILSKAKFISENNSKCNLKDKELNTELPQDSIENFKVEIYPYLQENEFSKFIDFEMDSKSVLNSEKCEDQNKPESDMYFNEPSSKLTPKSNPQEDVHDTLEAIKTNSPNTEKSSDDENDIADDSKAWMCDECGVICDSEKLLTDHREKHQKSSDPSGRCVHCSKTFSTSAELDDHLLFHEYSKLVEAASDRMVHQCMLCDKTCRTEIEFIDHINVHRDIRPYICTICSNAFHTKYNLRLHKWRVHNNHALKRRKGKEYDKCHHCQRVIKISHMERHTATHTAERNFSCADCGKKFLTKYGLKTHSTSHRQREFTCNICNKICFTDFTLRKHIQFIHMSDRKKYQCEDCGLVFQYPSYLKDHQRKHNTKNRFQCPHCDRSYCRKPQLDIHLRYHNNDFRYKCEQCDKCYVTKSNLTDHIKSRHTQITYDCDKCNQKFKSLTGLRKHKYTHTGYPYICPLCTVGQTSRSGMKAHMFGVHRDAVTEEEFNEMFPIIIPKSGYRRPKA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -