Mequ033273.1
Basic Information
- Insect
- Merodon equestris
- Gene Symbol
- -
- Assembly
- GCA_958301585.1
- Location
- OY284415.1:125577317-125582317[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 5.4 1.2e+03 1.8 0.1 10 23 56 69 54 69 0.94 2 21 0.26 56 6.0 1.1 1 23 296 319 296 319 0.95 3 21 0.00021 0.045 15.7 1.1 2 23 473 495 473 495 0.97 4 21 0.062 13 7.9 0.5 1 23 507 530 507 530 0.97 5 21 0.0089 1.9 10.6 1.2 1 23 535 558 535 558 0.96 6 21 0.00028 0.061 15.3 1.2 1 23 564 586 564 586 0.96 7 21 0.27 58 5.9 3.3 1 23 594 616 594 616 0.97 8 21 0.0022 0.49 12.5 0.6 1 23 622 644 622 644 0.98 9 21 0.0033 0.71 11.9 0.2 1 23 650 673 650 673 0.94 10 21 1.4e-05 0.003 19.4 0.4 1 23 678 700 678 700 0.94 11 21 1 2.3e+02 4.1 0.4 2 23 705 728 704 728 0.93 12 21 0.022 4.8 9.3 1.4 3 23 892 913 891 913 0.97 13 21 0.16 35 6.6 4.2 1 20 1053 1072 1053 1076 0.91 14 21 0.042 9.2 8.5 2.2 1 23 1088 1111 1088 1111 0.96 15 21 0.00031 0.066 15.2 1.8 2 23 1117 1139 1116 1139 0.91 16 21 0.00013 0.028 16.4 0.3 1 23 1145 1167 1145 1167 0.98 17 21 4.5e-06 0.00098 21.0 2.7 1 23 1175 1197 1175 1197 0.96 18 21 0.55 1.2e+02 4.9 1.9 1 23 1203 1225 1203 1225 0.90 19 21 0.00043 0.094 14.7 1.7 3 23 1233 1254 1232 1254 0.90 20 21 0.011 2.4 10.3 2.2 1 23 1259 1281 1259 1281 0.97 21 21 9.2e-05 0.02 16.8 3.0 2 23 1288 1310 1287 1310 0.94
Sequence Information
- Coding Sequence
- ATGACCCAAGTGAGAACAGATATATTATTGAACGGAACGCGATTGGAAATACATCCTTCCAAATTAACGAAATGCGGTGAAATTCACATCAACGACGATTGTACGAGTGCTTATCTATTTTGCGCCTTTTGTTCGGTCGAGAACGACGATCCTGATGTAAACATCTTCCGAACTCTCGCCGAATTTATTGACCACATACGATGGCATCGATCAGATGACATACAATATCCCCAATCACCTACATCACCAAAAGAAACCACAAAAGATCTATATGAGACGCTTGAAGACGATTCGAGAAGTAATTTGAGTGTACCACGTCACGATGCGGCTGACGATATAGCCGACTGGATCGCACCACCTGAGGAATTATTCGAATTAAACACAATTAGTAATTTGATTGAAATCGACACACAGAATGAGACAATAGTTTCCAATGATGTGAAATACAATGTCAATAATTTAAGCCCGCCGACTGCAGACCCTGTAGCAAATGCAACATCAAGTGCAGTAAACACTAATGAAGTTTATACTGCGGAGGAGGAAATTCCGGAAATCACTGGCGAAGTGTTCATTGATTTATTAGATTTATTCAAAAAGTGCCCTTGTTTGTGGCACTGTAAAACGACAGCTACCACGAGTCCCGAAACAATCGAGTGTGCGTATAAATTACTAACAACACACTACAATAAGTGTGCCCAACAAAACAGACCAATAGAATACGTGAAGTGTATCATTACACAAATTAGGGACTGCTTCTTAGAAGAGCACAAAGGTGCGAATAACCTGACAAACAAACGTGCGGACAACGTACCCTGGTACTTCACGCATTTGGATTTTCTGCTGAGCAGTGAAACCGATATATTGGATAACAGCGTTTTTACAGATTTTGTTTGTCCGGTATGTATGCAGGATTGCAGTTCTCTCGAGGATTTATGGGAACACTTGTGTCAGAATCACTTTGATACAAACAACAACGATAGTTTCGGGAACACCGATGACTCACAAAACGGCGATGGACTAAATattcctTTAAGTCACTTTCCAACGGAAATCGTAGAGAAATTCATCGAAGTCTATAGATCTCAAACAAGATTATGGGACAGAAAAAACGAAGAATATTACTCCCGCCCGTTAAGACGACAATCATATGATTTGCTTGTGAAAATCCTCCGCAAGCACGATCCAACATCGAATCGCACCGATGTCGTCAGAAAGATCAACCACCTAcgaaatcaatttatttacgaGAGAGGGAAACTGCTTTCTGTGAAATCTGGTACGAAAGCTAACCGATCATGGTTCTACGAAAAACTGAAATTCCTCGCTAACAGTGTCACAAAGCGATTGAATAATAGACCAGCGCAGCCGGCGATTCCATGCAAACCCGCCAACTTTAAGAAAAAAGTCAGAAATGCAAAATGCCCCATTTGCAACTCAACATTCACAGATCATTCCTCGTGGCTTAGTCATATGCAGTCTGCCCATACTAGCGACGAATATCAAGCCAAGGATGGCTTTTTCTATTGCGCCATATGCGGCTGGCAGAATAAAACCAAAGAGATATTAATGCGACATCTGCGAACGAGGCACACGTATAATCTTCATAAGTGCACCGATTGCAATGTTGGTTTCCGTCTACTATCGATGTTAGTCGAGCATCGAGCTAAATTTCACAACGACTTTTTGCCATTCAAATGCGAGACATGCAGTGAGGGCTTTGCAACGCGTTCCAGCTTACGAACGCACTCGACCAGCCATTGGTGTAAAGAGGATTTGCCACATAAGTGCGAATGTTGCGGTGCAAAATTTTCGGAACGCAATGCTTACAACGTGCACGTGCGACAACACAAAACGAAAGGTGAGCATCGATGTGAAATTTGCCAAGAGATAATGCCGACGAAAGCTTACTTGCGAGAACATATTAAGACACATTCAGATGTTTGTCCGCATATGTGTGGTTCCTGTGAACGGGCCTTTCCCACGGTTACCCTTCTGACTGCGCATATGAATGAGGAGCATAGTGGCACTGTTTATTCCTGCGAAGAGTGTGATAAGACGTTTAAAACGCCTAAATCATTAGCGGATCATTTCGAAGGCCATCAAGCGCAATGCAGCTGCGACGTGTGCGAGGATATACGGGTTCTTAAGACCCTCAGTGAGTTTATGGAACACATCAAATGGCATAGATCGGAAGATTTTACCATAAACATAAAAGACGACACACTTGATTCCTACGAAGCAGTTAGGATTGAGGTAGCTACCGATTTAATAGATCCACCACCCGTGGAGGCTGCATTAAATTCCAAAGAACTAGATGAAGAGACGAAAAACCAAGATGGTTTGGAAGATAGTCCAAATGATGTTCTGGTGAAGTTGTGTGATCTTTACAAGAAATGCCCATGTTTATGGCATAAAGAAactgcaaaagaagaagaatacctTATCGAACCGACGTATAGACTGTTGACAACCCAATACAACAGCTGGTCGGGACAGAGTAAATCGGTGGATTATGTGAGAAACCTTTTGGAGAAGTTGAAAACTAAATTTCTAGTAGAATTCACTATAGACGAGGATATGTCAGGTTCATTTCCATGGTATTTTGCGCATCTAATGTTCTTACTGATCTACGAAGAGGAGACAATCGATGAGAGTACTTACACGGACTTGTTATGCCCCATTTGTTCGCAAGAGTCATGCTCGCCTCAGGATTTGTGGGCACACTTGCGCCAGTGCCATCTCCGGTTGGATGACGGTAGTGTGGGTGGAAACGATGATGAATTCCCATCGCCAGCCAAAGAGCCTAGCTTATCTCTCGAGCTAACCGAACGATTAATTAAGGAGTACCAAGTACAAAGGCGGCTCTGGGATAAAGACTGCGCAGAATTTCGAAATCAAGCACTTCGCAACGATTCTTTTAACGCGATTTTAGACATTTTAAAAACAGAACATCCAGATGCAACGCTGAGCGATGTAATGgcgaaaattaaatatttccgcCAACAACATTCAGCCGAACGACGAAGAATATTGGAAAACAAACGACAAGGAGTAACGTACGAATCCCATTCTTGGTACTATCAACGTCTCAAGTTTCTCTCCGATGACCTCGAATCGAAAAATCAAAACCACTTATCGGAATACCTGGTCCCTTCCTATAACTGTCATATTTGCCAAAAGGAATTCAATGATCAGATCTGCTGGCTCGACCACCTCCAATGTGCACACGAAATGGAAGAATTACGATCGAGTGATGGATTCTTCTACTGCTCCATATGCAGCCTACAGAAGAAGACCAAATATTCCCTCATTCGTCACCTAAGGCAAATGCATACGAAGAATGACAAAACCTGCCACGATTGCGGCACATCATTTCGATTTATGAGCAAACTAGCTAGGCATCGAGCAGACGTACATAACGACCACGATCCATTCAAATGCAGTGAATGCGGCAAGGGTTTCCCCAGTCTCACGcgagtgaaaatccacatgGTCACCCACTGGAATGTCGAAGATCGTCCACATGCCTGCCCACATTGCAATGCTCGATTCTCGAATCGCGCGAATCTCAAGGTGCATATCAAACGGCATACGAAAGACTTTACATTCAAATGCACCATCTGTAACCATGCTTCGGCTACTGCAACCGAACTACGGTTCCACTCTTTCACGCATACCAAGGAGTATCCTGCGATTTGCGATGTTTGCGGCAAAGGCTTTCGAAGCCAATCGATGCTATCTACGCATAAAACCGAATGCCACAACGACACGATTTTCCAATGTGCCGTATGCTACAAGCAGTTCAAGTCAGAGAAAAAGCTGCAAGGCCACTTCAATAATCACAAAGATAATCCTGATCTAACGTGTAACATCTGTGGATCGAAATTCCGCCGAAAGTCGGCCTTGCACAATCATATGACTCAGAAGCATGACTCTGAGCAACAGACATCACTCAACAGTATTTCGGATAAAGACACTGACAATGTCGAAGCATCCCTAACCAAGAATCTCTAA
- Protein Sequence
- MTQVRTDILLNGTRLEIHPSKLTKCGEIHINDDCTSAYLFCAFCSVENDDPDVNIFRTLAEFIDHIRWHRSDDIQYPQSPTSPKETTKDLYETLEDDSRSNLSVPRHDAADDIADWIAPPEELFELNTISNLIEIDTQNETIVSNDVKYNVNNLSPPTADPVANATSSAVNTNEVYTAEEEIPEITGEVFIDLLDLFKKCPCLWHCKTTATTSPETIECAYKLLTTHYNKCAQQNRPIEYVKCIITQIRDCFLEEHKGANNLTNKRADNVPWYFTHLDFLLSSETDILDNSVFTDFVCPVCMQDCSSLEDLWEHLCQNHFDTNNNDSFGNTDDSQNGDGLNIPLSHFPTEIVEKFIEVYRSQTRLWDRKNEEYYSRPLRRQSYDLLVKILRKHDPTSNRTDVVRKINHLRNQFIYERGKLLSVKSGTKANRSWFYEKLKFLANSVTKRLNNRPAQPAIPCKPANFKKKVRNAKCPICNSTFTDHSSWLSHMQSAHTSDEYQAKDGFFYCAICGWQNKTKEILMRHLRTRHTYNLHKCTDCNVGFRLLSMLVEHRAKFHNDFLPFKCETCSEGFATRSSLRTHSTSHWCKEDLPHKCECCGAKFSERNAYNVHVRQHKTKGEHRCEICQEIMPTKAYLREHIKTHSDVCPHMCGSCERAFPTVTLLTAHMNEEHSGTVYSCEECDKTFKTPKSLADHFEGHQAQCSCDVCEDIRVLKTLSEFMEHIKWHRSEDFTINIKDDTLDSYEAVRIEVATDLIDPPPVEAALNSKELDEETKNQDGLEDSPNDVLVKLCDLYKKCPCLWHKETAKEEEYLIEPTYRLLTTQYNSWSGQSKSVDYVRNLLEKLKTKFLVEFTIDEDMSGSFPWYFAHLMFLLIYEEETIDESTYTDLLCPICSQESCSPQDLWAHLRQCHLRLDDGSVGGNDDEFPSPAKEPSLSLELTERLIKEYQVQRRLWDKDCAEFRNQALRNDSFNAILDILKTEHPDATLSDVMAKIKYFRQQHSAERRRILENKRQGVTYESHSWYYQRLKFLSDDLESKNQNHLSEYLVPSYNCHICQKEFNDQICWLDHLQCAHEMEELRSSDGFFYCSICSLQKKTKYSLIRHLRQMHTKNDKTCHDCGTSFRFMSKLARHRADVHNDHDPFKCSECGKGFPSLTRVKIHMVTHWNVEDRPHACPHCNARFSNRANLKVHIKRHTKDFTFKCTICNHASATATELRFHSFTHTKEYPAICDVCGKGFRSQSMLSTHKTECHNDTIFQCAVCYKQFKSEKKLQGHFNNHKDNPDLTCNICGSKFRRKSALHNHMTQKHDSEQQTSLNSISDKDTDNVEASLTKNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -