Basic Information

Gene Symbol
hang
Assembly
GCA_958301585.1
Location
OY284415.1:88005667-88033564[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.039 8.5 8.6 1.3 3 23 156 177 155 177 0.93
2 17 0.015 3.4 9.8 2.7 1 23 347 370 347 370 0.91
3 17 0.0014 0.31 13.1 1.7 2 23 477 499 476 499 0.95
4 17 0.085 18 7.5 0.1 1 23 507 530 507 530 0.95
5 17 2.7e-05 0.0059 18.5 0.1 2 23 627 648 626 648 0.97
6 17 1.9e-05 0.0041 19.0 2.5 2 23 691 713 690 713 0.96
7 17 0.004 0.88 11.7 0.3 2 23 722 744 721 744 0.95
8 17 0.00045 0.098 14.7 0.2 1 23 757 780 757 780 0.97
9 17 0.0003 0.066 15.2 1.0 1 23 809 831 809 831 0.99
10 17 0.0013 0.28 13.2 0.9 1 23 839 862 839 862 0.96
11 17 0.0051 1.1 11.3 0.8 2 21 870 889 869 890 0.94
12 17 0.00012 0.026 16.5 0.5 3 23 948 968 947 968 0.98
13 17 0.00012 0.025 16.5 0.3 1 23 1003 1025 1003 1025 0.97
14 17 0.00072 0.16 14.0 0.4 2 23 1051 1073 1050 1073 0.93
15 17 0.088 19 7.5 0.2 2 19 1093 1110 1092 1112 0.93
16 17 0.0044 0.96 11.5 0.6 3 23 1128 1148 1128 1148 0.98
17 17 0.002 0.43 12.6 0.4 1 23 1280 1302 1280 1302 0.97

Sequence Information

Coding Sequence
ATGAGGATAGAGAAGAAACAAATTGGTTCGGGTGTTTCAGTTACAACCATTCCAACCTGCGAGACTAGTGATGGAATTCGAGAAAGTAGCGAACAAGGCAATGAACTGGCTTCGTCAATTCTAGAGGGAATCTCCTCGCTGAAAAAACGACGTTCTTTAACTGTCTACccCATTCCAGGACATATTAAGGATGAGCCATTGGATGATGATTATGATACAAAACTTGAGGAGTCAGATATCGATCCAACATTGTTTTTAGAACGAAATGAAGAAGAAGGATCGGATCACTTGTCACAAAAGGAGCAGCACCTGGCGTCATTGGGCTTGAAACAAGCAACTACTACTTCTGCGCATCCATTGCATTACCTGAATGACTACAATATTGAAGGGGAGAAGAATTCTCTCCCGTCTACAGATAGATCACTAGAAATCACTACAACAACAAGTGAGATCAAGGAAGCATCATGCCGAGCCTGTAACCTTAAATTTTCCACCCGCGCAAATGCCCGCCGCCACGAACGCAACCTTCACCCGCACTTATTCACAAGTATAGCATCTTCAACCAAGGGTTTGAGTGTAGCCTCACCAACACAACAAGCTATTAAGAGTGCACACGCCCTGGGACAAGTTCGGCCAACAATCAAAACCGAACAAATGGGACTCTTTGATTATGATCAGCCGGAGAAATATCAACACCTTTTGACCGAGGACAAAATACTATTCATGCAGCGAAATGAGGACTTCCTTCAGCAGTACCAAAACATGACCTGCAATTGTTGTTTGCGCACCCATTCTACCTACAAAAATTTCATGGCGCATATGCGGAAAAAATACCATTCATTACCACGTAACCTTTGTTTTAAGTGTCTAAAACAAAACGATTCCAAAGCCTTATTCATTTCACATCTAAAGAAACGGAACTGTATTAACCTTTATAAGATCTATCATGGTTTGATCGAAGCAGGTGTTCTGAAGAAGGATGCGCCAAGCTGTTCCCCCGACAAATTGCGCGCCAAAGAATTACTGGTCAATAAGATCTATGAGTGTAAGATCTGTTCCAAGCATTTCCGACTTAAGTTAGAGTTCCGAAGTCATGTCTACGAAGAGCACGGTGATTCCCAAAAGAAGGACGTATCCCCTGGGCATTGTGGTTTTTGTGGACTGGAGATTGAAGACCCTTTTGAGCGCAAACGTCACTATAACAATATGGATTGCATCGTTATCCTGCGCTGCATAACATGCGAAGAGAAGTTTGACAATCATCAAAAATTTCTTGACCATGTCTATTCCAAACATTTGATAAACAACAACGAAGCTCAGAAGAGCAACTTAATGAAGGAGCTCTCGTCAACTACCTCAACAGACAGTTCGCCATCAAAGAAGTCCGAAACCCCTTCTAAGCCACAATTCTTTTCACGGCTACCTCAAAGTTGCAACATTTGCGGTCAGCATTATAACAACTATAATAACGTTCTTCGACATATGGAATCCAAACATCCTGACCAATTGCCACAGACTTACAAATGCACCCGATGTATGGTTGGCTATCCCCGTCTAATGAACCTCCGAGAACACATGATCGAAGTGCACGGCATGAAAGTAGACAAAGTACGCAATAATAGTTTTGATTATATCGTCGACTCGCCAACGGTACAGGGAGGCATGGCCCGAACAGTAGACAAGGTAGGGTCCGATGCATACACCGGGCGCTACGATTATGTAATGAAAGATTTAATGTCAATTACCAATGGTGGTACGTCCAATAATGATGGCGCAAACGATAATGATGACGAAGGAAACCAATCAGATTCATGTGCTCCAAAGAAGATAAAGCTCGATAGTGGCCTGATGGTAGCGGTAGGCACCGCAAACCTAAAAGAATGTCCCATTTGTAGTGCAGTATTCAACAATAACATCGGTCTTTCTAACCACATGCGCACGCATACAACAGGAGCTGAAGTGGGCGATGATGACGTGGTCGAGCGGGGAGacgactttgaaaaaaaacccattgatcctttattcaaaagaagtcTTGAACTGGCGGCGGATCGTCGATTCCGTCGTATGCGTTGTCGCATTTGTCAAAAACGGTTCTCTTCTAAGAAGAGCTATCGTCGCCATATGCTTATCGATCATCAAATTCGTAACGTTCAGTTCATTAAATGCAAGCTTTGCAATGCGGAATTCGCTTACGAAAAAGGACTCAAGGTACACATGTTTAAGATACACAACACATTGTTAAAGGATGAAATGATCGTGAAGCAATTCGAGTGCGATATTTGTTCCATCGTTTACCGAACCGAAGAACAATTGCTGCAACACAAAAAATCAGTTCACGGCAATGAGAGTGCTCAAGCCGAGGATAAACCGCCTCCATCCATAGATCAAGGTATGGAATCACCAGCAGCACCCCTTTATTGGTATCAGTGCCGTTACTGCCCTTCGAACTTCAATACAAATAAGAAACTAGCCATTCACATAAACTCCCATTATGAGTTTGATTCTAATGACTACTCTTGTAAGGATTGTGGTAATGTCTACAGTGGTAGAAAGAGTCTTTGGGTGCATCGTTACAAAAAGCACCCACCGGTCGCTGATCCGTCTGAGTGCAGCTTctgcaaaaaaatattctttgataAGCAAATGCTTAATAATCACTTGCAGTCTTGTGTTCAAAAACGAGTTGAACCAATTGCAACCCCCGATACCGAAACCATCACCAACTTTTTCCAACATAAGACAGGTGACGATGAGGACGTGAGTGAGCAGCATCATCAAAAAGAAACCGCAATCAGCGAAAATCCTGCAAATCTCAAAATCAAACTGCCTGAAGTTGCCTGTACCATCTGTGCGCAAAAATTCACCGACCAGGACCTCTTTACTAAACACATTCAAATGCACGAAATGGAGTTGTACACAGATAATCCGTTGGCGTCTATGTTTGATACCGGTCCTGCCGATCCCAATCAATTCTACTTGGACCGAGTCAATGATAATGGAGAATATGCTTGTGACGTTTGTACTAAGACGTTCGCCCAGATGACAGCACTCAAGGTTCACCGCAAATGGCATTTTCGAGGTGATAGCAAACAGATGCCCCTAGTCGATTTAAACGTGCCAAAGACGACGAAACGAAAGCGTGAACTTAAATGCGACTACTGCCTGTCAACTTTCATCAGTTCCAACAATCTCCGACGTCACATTGCTGAATTACACAAGTCTGAAGTGTCCAATTGGCCCGAGCCACCGAAAATTGAGCCCGAAAAGTACCTTCAATGCACTAGATGTGATTTAAAATTCGATACCAAAAAAGACTGGATCGAACATAAAGTAAACGAGGCAAAGACAGCCAAGCCATTTGGTCCATTTCAGTGGGGCTGTGAAATCTGTGGCATGTACTTATCTCGTCGCGAAAAGCTCATACACCACATGTTGGCGCATATCAAAGAGACAAACGGTCAGGCGAATGTCGAGGCCGAAAACTATCCAGGTGAGAGTAATTCTCAGGATTCCGAGTCGTCTGGTCATCAAGAGACGTCCGAGCAACAACAAATTGAAGAGGAAGACgatgaggaggaggaggaggaagaagaagaattcgaTGGCGATGAGGACGACATAGACATAAATGCAGTAAACCACGACGACAACGCCAATGATGGACAGAACGAAGACGATGATACTGAACAGCAATCATCAATCAACCAACGGCTACGACAAGAATCTAATGACGAAAGCAATGATACCAGCGACCAGAGTTCTGACACTGATGATTCCTCATCTGAAGACGATGAACCAGAAAACTTTCCTGAGCGCAATGAACAAGCAAAAAGATATGCGTGCGATTTATGCCAAGTGTACTTTGAAACATCCACAGAACTACAAAAACACGTTACTAGTCACTTTTTGAACGGGCCGGGCTCGGTTACATTGACGACCATCACTACGGACATGGCCAAACAGGCAGAAGTTACAACAAAGAACACcagcgatgacgatgatgatgaaatTAACCAGGCAGTGACACTCGATTCCTAA
Protein Sequence
MRIEKKQIGSGVSVTTIPTCETSDGIRESSEQGNELASSILEGISSLKKRRSLTVYPIPGHIKDEPLDDDYDTKLEESDIDPTLFLERNEEEGSDHLSQKEQHLASLGLKQATTTSAHPLHYLNDYNIEGEKNSLPSTDRSLEITTTTSEIKEASCRACNLKFSTRANARRHERNLHPHLFTSIASSTKGLSVASPTQQAIKSAHALGQVRPTIKTEQMGLFDYDQPEKYQHLLTEDKILFMQRNEDFLQQYQNMTCNCCLRTHSTYKNFMAHMRKKYHSLPRNLCFKCLKQNDSKALFISHLKKRNCINLYKIYHGLIEAGVLKKDAPSCSPDKLRAKELLVNKIYECKICSKHFRLKLEFRSHVYEEHGDSQKKDVSPGHCGFCGLEIEDPFERKRHYNNMDCIVILRCITCEEKFDNHQKFLDHVYSKHLINNNEAQKSNLMKELSSTTSTDSSPSKKSETPSKPQFFSRLPQSCNICGQHYNNYNNVLRHMESKHPDQLPQTYKCTRCMVGYPRLMNLREHMIEVHGMKVDKVRNNSFDYIVDSPTVQGGMARTVDKVGSDAYTGRYDYVMKDLMSITNGGTSNNDGANDNDDEGNQSDSCAPKKIKLDSGLMVAVGTANLKECPICSAVFNNNIGLSNHMRTHTTGAEVGDDDVVERGDDFEKKPIDPLFKRSLELAADRRFRRMRCRICQKRFSSKKSYRRHMLIDHQIRNVQFIKCKLCNAEFAYEKGLKVHMFKIHNTLLKDEMIVKQFECDICSIVYRTEEQLLQHKKSVHGNESAQAEDKPPPSIDQGMESPAAPLYWYQCRYCPSNFNTNKKLAIHINSHYEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPPVADPSECSFCKKIFFDKQMLNNHLQSCVQKRVEPIATPDTETITNFFQHKTGDDEDVSEQHHQKETAISENPANLKIKLPEVACTICAQKFTDQDLFTKHIQMHEMELYTDNPLASMFDTGPADPNQFYLDRVNDNGEYACDVCTKTFAQMTALKVHRKWHFRGDSKQMPLVDLNVPKTTKRKRELKCDYCLSTFISSNNLRRHIAELHKSEVSNWPEPPKIEPEKYLQCTRCDLKFDTKKDWIEHKVNEAKTAKPFGPFQWGCEICGMYLSRREKLIHHMLAHIKETNGQANVEAENYPGESNSQDSESSGHQETSEQQQIEEEDDEEEEEEEEEFDGDEDDIDINAVNHDDNANDGQNEDDDTEQQSSINQRLRQESNDESNDTSDQSSDTDDSSSEDDEPENFPERNEQAKRYACDLCQVYFETSTELQKHVTSHFLNGPGSVTLTTITTDMAKQAEVTTKNTSDDDDDEINQAVTLDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00688901;
90% Identity
-
80% Identity
-