Basic Information

Insect: Merodon equestris
Gene Symbol: -
Assembly: GCA_958301585.1
Location: OY284414.1:8064421-8068996[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 9.6e-07 0.00021 23.1 2.1 1 23 311 333 311 333 0.98

2 9 1.8e-08 3.9e-06 28.5 2.7 1 23 339 361 339 361 0.98

3 9 3.7e-05 0.008 18.1 0.4 1 23 367 389 367 389 0.98

4 9 4.2e-06 0.00091 21.1 0.9 1 23 395 417 395 417 0.98

5 9 2.8e-05 0.0061 18.4 1.4 2 23 510 531 509 531 0.96

6 9 3e-09 6.4e-07 31.0 1.6 1 23 537 559 537 559 0.98

7 9 0.0018 0.39 12.8 0.7 3 23 567 587 565 587 0.98

8 9 0.00015 0.032 16.2 0.8 1 23 593 615 593 615 0.99

9 9 0.0084 1.8 10.7 0.9 1 23 621 645 621 645 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	9.6e-07	0.00021	23.1	2.1	1	23	311	333	311	333	0.98
2	9	1.8e-08	3.9e-06	28.5	2.7	1	23	339	361	339	361	0.98
3	9	3.7e-05	0.008	18.1	0.4	1	23	367	389	367	389	0.98
4	9	4.2e-06	0.00091	21.1	0.9	1	23	395	417	395	417	0.98
5	9	2.8e-05	0.0061	18.4	1.4	2	23	510	531	509	531	0.96
6	9	3e-09	6.4e-07	31.0	1.6	1	23	537	559	537	559	0.98
7	9	0.0018	0.39	12.8	0.7	3	23	567	587	565	587	0.98
8	9	0.00015	0.032	16.2	0.8	1	23	593	615	593	615	0.99
9	9	0.0084	1.8	10.7	0.9	1	23	621	645	621	645	0.95

Sequence Information

Coding Sequence: ATGGCGATAAATTTTCCCGCCTCGTTTGCGGCATGCATAGCAGCAGGTCTCAAAGTGCCACGACAGATTATGTACTGTATATCACAGGATACCGGACAACCATATGTACTTTATAAAGATTCGCAAGAGGCAGCCGAGCGTAATGCAGCCGCACTGGGTGGAGCGGCTGCGCAGTGGGGAACGGAAATGTATCCAGCGATACAACAGAATTCGCAAACGCATTTAGCGGCTCAGAATGCTCAAAATTCATCGCCACAAATAGCTACGACGGCAGCAACGGCAGCCGCGGTAGCAgcccaacaacagcagcagcaacagcaacaacagcaaccgcATAGTCCGTCGGGCGATGTCGATCAATCACGTGATAATGGTcgacagcagcaacagcagcaaggATCGCCGTCGACCAGTCCGTATCCGCAGCGATCGAATGGTGCCGCCGGTGGTGGTGGCGAAGACGATGTGGCCATGAGTCAGGTGGCTGGaatgcagcagcagcaacagaatGCCGCACAACAACAAAATCCAAACCAAAGTAATAGCGATCCACAACCAATATCCGTCGATCCGGCGTCGAATAATCAAGCACAGCAAACCAATGACCAAACTTTCAATCCGCCACAGGGTGCCGAACTCGGCTATTATGCTCCCCGACATCCGGGCGGTCCGCAAGGTGCAATGTTAGCGCCACCAGGCTTCCCGCCCCTACACTATCTCAACAAACCCGTTTTGTCCGGTATGACCGGATCaatggatcaaaatggtggCCTCGAAGCATACGCAATGCCTGATCTCTTACCTGGCGGTGGTGCAGGCGGTACTGGCACAGGCGCCGGAACTGGTGCCCACGGCGGCATGCATCAAAACACCACGGCCacatcaacaacaaccacacataaaataaaaacacaaagcgATCTACGTCTATTCAAATGCACGACATGCGGCAAGGACTTTAAGCAAAAATCAACGCTGCTGCAGCATGAACGTATCCATACGGACGCCCGACCGTTTCCCTGCACCGAATGCGGCAAACGTTTCCGTCAGCAGTCACACCTCACTCAACACCTGCGCATACACGCCAATGAAAAACCATTCTCGTGTGCGTATTGTCCACGCAGCTTCAGGCAACGAGCGATCCTCAATCAGCACATTCGCATCCATTCGGGTGAGAAGCCCTACGCATGCCCAGAGTGCGGCAAGCACTTTCGCCAGAAGGCCATCCTCAATCAACATGTGCGCACCCACCAAGATGTCTCGCCACATCTCATCTTCAAGAATGGACCACATCCGACGCTGTGGCCCCAGGACGTACCATTCCCTGGCGATGAAACTGACTCGAAGAATGACATTACGGGCTATCAGGATGACGGTTCACAGGGTACACCCGAGTCACGAGCATGCTTCTCACCCGACGGCAATGGAGGTCTACACTATCCTTCGTACTTTAAGGATGGTAAAGGGCAAAAAGTGCTGCCCGATGTTATACAACATGGTCGTGCAGCAGGTATGCCACTTTATGTGAGATGTCCGATCTGTGACAAGGAGTTCAAGCAGAAGACTACGCTACTGCAGCATGGTTGTATACACATCGAATCCAGGCCGTATCCGTGTCCCGAATGCGGTAAACGATTCCGTCAGCAATCACACTTGACGCAGCATTTGCGGATACACACGAATGAGAAGCCATTCGGATGTTTGTATTGTCCGCGGTTCTTCCGGCAGAGGACCATACTCAATCAACACATTCGAATTCATACTGGTGAGAAGCCATACAAGTGTGCACAGTGCGGCAAGGATTTCCGGCAAAAGGCGATACTGGATCAGCACACAAGGACGCACCAGGGAGATCGACCATTCTGCTGTCCGATGCCAAATTGTCGAAGACGATTCGCCACGGAGGGCGAAGTGAAAAAACACATCGACAACCACATGAACCCGCATTCATCGAAGGCACGTCGTCAGACCAATCATATGACCAACGATGTGAAAAATGTTGCCGCTACCGCTGCGCAGTTATTCACAAATATGGAAAACAAAGGCAACATCATACCACGCATGGGTCCAGTCGTCAAACATGAACTCTATTTTCCACAATGTTACGGCGCACCATTCAATCAATCGTTCGGCGCGCAACAACAAGGCCAAGGACAACCGGGTCAACCGCAACAACCAGTGCAACAGCAAAAGCAACCCGGTCAGCAGCAACAACCGAATTCAGGGCACAATAGTAATACAGGGCCACCGGCAACAGGAGCCGGCGGTACAGTTGTTACAGTGGCAAATTCCGCAGCACCCGCTGTACCTCCACCCCCGGCAGCGCCACCACCACAGTCAGTGCAATCGGCATCCGTGCATTTGCCAGCGCCTCCACCCCAACAACAATCAGCATCTATAGTTCCCGTGCCCACAGCAGCGATCTCAGCGGCAGCGGCTGCAGCTGCCGCAACAGCTCACACCGTCACATTATCTATATCATTACCGCCATCAGCATTACCTCAAGGCGCTACAACGAACGGTGTCGGTGGCGGTGGCAATGGCACCCATGTATTAGCACCACCACCACCCACATCCACAACATCGCTTCTTCCAGCGCATTCTGTGGCGCCATCTACGACGATATCGCATGCGATTCCCATTCATCCACACATTCATTCTATATTCGGATCTCTATGA
Protein Sequence: MAINFPASFAACIAAGLKVPRQIMYCISQDTGQPYVLYKDSQEAAERNAAALGGAAAQWGTEMYPAIQQNSQTHLAAQNAQNSSPQIATTAATAAAVAAQQQQQQQQQQQPHSPSGDVDQSRDNGRQQQQQQGSPSTSPYPQRSNGAAGGGGEDDVAMSQVAGMQQQQQNAAQQQNPNQSNSDPQPISVDPASNNQAQQTNDQTFNPPQGAELGYYAPRHPGGPQGAMLAPPGFPPLHYLNKPVLSGMTGSMDQNGGLEAYAMPDLLPGGGAGGTGTGAGTGAHGGMHQNTTATSTTTTHKIKTQSDLRLFKCTTCGKDFKQKSTLLQHERIHTDARPFPCTECGKRFRQQSHLTQHLRIHANEKPFSCAYCPRSFRQRAILNQHIRIHSGEKPYACPECGKHFRQKAILNQHVRTHQDVSPHLIFKNGPHPTLWPQDVPFPGDETDSKNDITGYQDDGSQGTPESRACFSPDGNGGLHYPSYFKDGKGQKVLPDVIQHGRAAGMPLYVRCPICDKEFKQKTTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPFGCLYCPRFFRQRTILNQHIRIHTGEKPYKCAQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEGEVKKHIDNHMNPHSSKARRQTNHMTNDVKNVAATAAQLFTNMENKGNIIPRMGPVVKHELYFPQCYGAPFNQSFGAQQQGQGQPGQPQQPVQQQKQPGQQQQPNSGHNSNTGPPATGAGGTVVTVANSAAPAVPPPPAAPPPQSVQSASVHLPAPPPQQQSASIVPVPTAAISAAAAAAAATAHTVTLSISLPPSALPQGATTNGVGGGGNGTHVLAPPPPTSTTSLLPAHSVAPSTTISHAIPIHPHIHSIFGSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01044903;
90% Identity: iTF_00688878;
80% Identity: -