Basic Information

Insect: Merodon equestris
Gene Symbol: -
Assembly: GCA_958301585.1
Location: OY284415.1:32685635-32687534[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0018 0.4 12.7 1.6 2 23 130 152 129 152 0.95

2 10 6.1e-06 0.0013 20.5 5.1 1 23 157 180 157 180 0.96

3 10 8.4e-06 0.0018 20.1 4.4 1 19 292 310 292 312 0.96

4 10 1.7e-07 3.7e-05 25.4 0.7 1 23 320 342 320 342 0.98

5 10 0.0001 0.022 16.7 1.0 1 23 347 370 347 370 0.92

6 10 5.3e-07 0.00012 23.9 0.2 1 23 376 398 376 398 0.96

7 10 3.8e-05 0.0082 18.0 2.1 1 23 404 426 404 426 0.98

8 10 2.2e-07 4.7e-05 25.1 0.5 1 23 432 454 432 454 0.98

9 10 4.4e-08 9.5e-06 27.3 3.1 1 23 460 482 460 482 0.99

10 10 0.0027 0.58 12.2 0.8 1 23 487 510 487 510 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0018	0.4	12.7	1.6	2	23	130	152	129	152	0.95
2	10	6.1e-06	0.0013	20.5	5.1	1	23	157	180	157	180	0.96
3	10	8.4e-06	0.0018	20.1	4.4	1	19	292	310	292	312	0.96
4	10	1.7e-07	3.7e-05	25.4	0.7	1	23	320	342	320	342	0.98
5	10	0.0001	0.022	16.7	1.0	1	23	347	370	347	370	0.92
6	10	5.3e-07	0.00012	23.9	0.2	1	23	376	398	376	398	0.96
7	10	3.8e-05	0.0082	18.0	2.1	1	23	404	426	404	426	0.98
8	10	2.2e-07	4.7e-05	25.1	0.5	1	23	432	454	432	454	0.98
9	10	4.4e-08	9.5e-06	27.3	3.1	1	23	460	482	460	482	0.99
10	10	0.0027	0.58	12.2	0.8	1	23	487	510	487	510	0.97

Sequence Information

Coding Sequence: ATGTTGGAAAAGACTTTCGAAAAGGAAAAGACGTGCAGGACCTGCGTGAAGAATGGAACCGAGCTGTCGCCCTTATTCGTTAAGCAAGATGCCATACATGGAATCAGCTATTCGGACATGATTTTGGAGTGTACATTGTTCCAAGCCGAGGAGCATGAGGATCTTCCGCACCTTATTTGCACGGATTGTCAGGCGAAAGTAAAGATCGCCTATGATTTTAAGAAGCTATGTGAAGAGTCTCACCGGAAACTTTTGGCTATGCTGAAATCGACAAAGGACGTTCAACCTGCAATGGTGAATGGCGATTTGCCCCTAGAAATCAAAGAGGCGAATGTGCAAAATATTTTGAGGGCAAAGTCGACCCGCAAAGCAGCTGCTAAGGATAAGTCATGCGAAAAGTGCAGTCAAACTTTTGATAATCTCGAAAAACTAAAGGAGCATACCAAGCAAGAGCACACGGAGCGACTTCACAAGTGTCCAAAATGTTCGAGGAATTTCGTCCGAAAAGGCCATTTGACGCGGCACTTGAAAAATGTGCACGGACGGGACCAATCAGAAAGTGAAGATGTTAGTATGGCAAATGAAAACGAGACGGGAATTCAGATAACAAACGTGGAAAGCGGCATGTCGAATACGGAGGCCGACTTCAACTTTGGATCTGATAATGACGATGATCCCACCTACCGCGACGATGTCGAATCTCAGAACTCAGTTAAAGGGGACCTCGAGCCCGCCGTAGTTAATGCAAGTACCGAAATATTCTCATCCGATGCGGAGCCAACAATACAAGAAGATTCCTTCATAAAACGAGAACAAAGTCCAACACGGCCCGACAGTCCATCCATAAGTATTCATCAAGACTCAATTAGACGATTTCAGTGCGACCAGTGTCACAAGGCCTTTAAGAGAAAATCCCACCTCAAACAGCATTCATTATGTCATACGAAAGTCAAACCCTACCAGTGTACGGTGTGCCAGAAGCGATTCGGGAGACCCGACAATCTGAAAGTACATATGTCTAACCATGGACAAAAGCACTTCCAATGCAATGCCTGCGATCGATCCTTCGGCCAGGCGTATCTGCTCAAACGTCACAAAGACCAGACGCACAGTGAAGAAAAGCCGTTTCTCTGCTCCGAATGTGGTCAGCGTTTCGTGCGCAATGGCGATCTTGCAGTTCACATGCGACGCCACACCGGCGAGAAGCCCTACAAGTGTCAGTATTGCAATAAAGGATTCACTCGTTCAACGGAGGTTTATGTACACGAGAGATATCACACGGGAGAGAAAAGACACGTTTGCAGTGTTTGCGGAAAGGCGTTCCAACGACCGTACAATCTCCTAGTCCACGTCCGAACGCACACGGGAGAGCGACCGTATCAGTGTCCCCATTGTCCGAAGAACTTTGCACAGTGCAGCGACTTGAAGGCACACATTCGCCGACACACAGGCGAGCGGTATCGATGTGATCAATGCGGAATGGGCTTTATCCATGTGTTTGTCTTGAATCAGCATAAACTAACAGTGCACGGGATTGAGGTGCCGTCTCGAATAAAGCGAGTGACTAAGCTAAGCACGGACactcaataa
Protein Sequence: MLEKTFEKEKTCRTCVKNGTELSPLFVKQDAIHGISYSDMILECTLFQAEEHEDLPHLICTDCQAKVKIAYDFKKLCEESHRKLLAMLKSTKDVQPAMVNGDLPLEIKEANVQNILRAKSTRKAAAKDKSCEKCSQTFDNLEKLKEHTKQEHTERLHKCPKCSRNFVRKGHLTRHLKNVHGRDQSESEDVSMANENETGIQITNVESGMSNTEADFNFGSDNDDDPTYRDDVESQNSVKGDLEPAVVNASTEIFSSDAEPTIQEDSFIKREQSPTRPDSPSISIHQDSIRRFQCDQCHKAFKRKSHLKQHSLCHTKVKPYQCTVCQKRFGRPDNLKVHMSNHGQKHFQCNACDRSFGQAYLLKRHKDQTHSEEKPFLCSECGQRFVRNGDLAVHMRRHTGEKPYKCQYCNKGFTRSTEVYVHERYHTGEKRHVCSVCGKAFQRPYNLLVHVRTHTGERPYQCPHCPKNFAQCSDLKAHIRRHTGERYRCDQCGMGFIHVFVLNQHKLTVHGIEVPSRIKRVTKLSTDTQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -