Basic Information

Insect: Merodon equestris
Gene Symbol: -
Assembly: GCA_958301585.1
Location: OY284415.1:122465441-122467378[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.8e-06 0.0004 22.2 1.9 1 23 208 230 208 230 0.98

2 12 0.00033 0.071 15.1 7.2 1 23 237 259 237 259 0.96

3 12 3.2e-06 0.0007 21.4 0.6 1 23 277 299 277 299 0.99

4 12 4.3e-06 0.00094 21.0 1.9 1 23 309 331 309 331 0.98

5 12 1.7e-05 0.0036 19.2 1.0 3 23 339 359 339 359 0.99

6 12 0.0028 0.61 12.2 7.3 1 23 365 387 365 387 0.98

7 12 2.5e-07 5.5e-05 24.9 0.3 1 23 393 415 393 415 0.95

8 12 0.00033 0.071 15.1 2.0 1 23 421 443 421 443 0.99

9 12 2.3e-05 0.0049 18.7 1.1 1 23 449 471 449 471 0.98

10 12 0.0048 1.1 11.4 8.2 1 23 477 499 477 499 0.99

11 12 2.3e-06 0.0005 21.9 1.3 1 23 505 527 505 527 0.98

12 12 4.1e-05 0.0089 17.9 0.4 1 23 533 555 533 555 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.8e-06	0.0004	22.2	1.9	1	23	208	230	208	230	0.98
2	12	0.00033	0.071	15.1	7.2	1	23	237	259	237	259	0.96
3	12	3.2e-06	0.0007	21.4	0.6	1	23	277	299	277	299	0.99
4	12	4.3e-06	0.00094	21.0	1.9	1	23	309	331	309	331	0.98
5	12	1.7e-05	0.0036	19.2	1.0	3	23	339	359	339	359	0.99
6	12	0.0028	0.61	12.2	7.3	1	23	365	387	365	387	0.98
7	12	2.5e-07	5.5e-05	24.9	0.3	1	23	393	415	393	415	0.95
8	12	0.00033	0.071	15.1	2.0	1	23	421	443	421	443	0.99
9	12	2.3e-05	0.0049	18.7	1.1	1	23	449	471	449	471	0.98
10	12	0.0048	1.1	11.4	8.2	1	23	477	499	477	499	0.99
11	12	2.3e-06	0.0005	21.9	1.3	1	23	505	527	505	527	0.98
12	12	4.1e-05	0.0089	17.9	0.4	1	23	533	555	533	555	0.96

Sequence Information

Coding Sequence: ATGGAGCTGGATTTTAGTAATTTCGataaaatatgtcgaacttGTATAAAAACCGACAAAGAACCTCTTCAACCAATATTCCaaacaaatattcaaatatcCGACAAGTGCTGTAGCATAGTGGAGCTTCTAACAACCGTTTCGACACTCAGTTTTGCCCCGGATGATGGTCTTCCGAAAGGAATATGCCCCGAGTGCACCGATGTTTTGCTAAATGCATTCAAATTCCAGAGAATGTGCATAGATTCGGATCAATTGCTGCGGAATGTTCTTTTATGTGAACGGAAAGACAATAGCGACTGCTTGCCGGATGAATTCCTTCTCGTGAAAGAACCTTCTGAACCTTCTGTTGACGAGGCTAGGACTTTGAAGCTGGAGGACACTGTAAATaacaatgatgatgatgtGTCTTCAACTGTTGAGGCGATTCTTGACTTTAGTCCCCCTGATCACGACATGACTTTAAAGAAAGAATGCGACGATGAGATGGATGGGAATTCCGAAAATAGCCCTGGAGACAGCAGACCTGAAGAAGGACCTATCACCGAAGCAGAATCGACTGTAAACCTCACAAATACTGAAATCGAAAGGCCGAATCCTCGCAATCGCCGTAGTGCCTGCTATACTTGCGATGCCTGTGGCAAATCATTCGACCGTCAACATCGTCTGTTGCGTCATATGAATGTGCATAAACCCGATGGGCGACCACACGAGTGCAAGCACTGCAAACGTCGCTTCACAAAAGAAGCCCATCTCCAGCGGCACGCAGTTACCCATGAGAAAAATTTCCAAGAGAAAACAGAAATGAGTAAGCAAAGTCCGGATGGTTACAAGTGTCCAGAGTGTCCGCGTAAATTCCTAAAACAAGAATCGTTAGCCTCCCATATGCGAACGCATCGTCGAGAGACTGATTCGACGAAGAGCTACCAGTGTGACATCTGCCAAAAAGTGTTCGACAGGCTCTACCGCCTCACGCGGCACAGAAAACTGCATAAAGAGAATCGCAAGCTGGGATGCGACATTTGCGGCAAATCTTTCGGCTTAAGCTCCCACCTTATCGATCATCTGAACAAGCATAGTGGTCTCAAGCCACATGTATGTCATTTCTGTGATAAATCATTTCTCCAAGCCTGTACTCTTAAGGATCATTTGCGTACCCACACAGGCGAGCAACCATTCCTCTGTGCTGAATGCGGTAAGGCATTTAACAATGCAAGTAACCTACGCCAGCACCAGCTGCGACATTCTGGCATAAAACGATATCAATGTCCCGAATGTCCGAGTAAATTTACATGCAAAAGCGGCCTGTCCTCGCATATGAGCACGCATCGTAATCAGAAGCCGTTTGTTTGTGACCTTTGCGGCTCTCGTTTCACGAAACTCTATTCTCTGAAGAAACATGAAAGGATACACACGGGCGAGAAGCCCTACAAATGCGACTACTGCGAAATGAGGTTTAACTGCTCGGATCACATGAAGCGTCATAGGCGAACGCACACGGGAGAGAAGCCATATCCCTGTAAATACTGTACAAGGACCTTTGCGCAGTCGAACGACATGATAAAGCATCTGAGATCACACGTCGGCGAGAATGTGTACAAATGCGAGCAGTGCGATGCCTCGTTTCGATTGAGCACGGAGTTGAAGAAGCACGTCGCTGAGCATTACAAGGTCGAGAAGGCGCAGGCCAATGAAGTTACTGTAGATATTAGGTAG
Protein Sequence: MELDFSNFDKICRTCIKTDKEPLQPIFQTNIQISDKCCSIVELLTTVSTLSFAPDDGLPKGICPECTDVLLNAFKFQRMCIDSDQLLRNVLLCERKDNSDCLPDEFLLVKEPSEPSVDEARTLKLEDTVNNNDDDVSSTVEAILDFSPPDHDMTLKKECDDEMDGNSENSPGDSRPEEGPITEAESTVNLTNTEIERPNPRNRRSACYTCDACGKSFDRQHRLLRHMNVHKPDGRPHECKHCKRRFTKEAHLQRHAVTHEKNFQEKTEMSKQSPDGYKCPECPRKFLKQESLASHMRTHRRETDSTKSYQCDICQKVFDRLYRLTRHRKLHKENRKLGCDICGKSFGLSSHLIDHLNKHSGLKPHVCHFCDKSFLQACTLKDHLRTHTGEQPFLCAECGKAFNNASNLRQHQLRHSGIKRYQCPECPSKFTCKSGLSSHMSTHRNQKPFVCDLCGSRFTKLYSLKKHERIHTGEKPYKCDYCEMRFNCSDHMKRHRRTHTGEKPYPCKYCTRTFAQSNDMIKHLRSHVGENVYKCEQCDASFRLSTELKKHVAEHYKVEKAQANEVTVDIR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -