Basic Information

Insect: Merodon equestris
Gene Symbol: -
Assembly: GCA_958301585.1
Location: OY284415.1:5936583-5939758[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00017 0.036 16.0 1.1 2 23 392 413 391 413 0.97

2 16 8.6e-06 0.0019 20.1 0.8 1 23 419 441 419 441 0.98

3 16 8.7e-05 0.019 16.9 0.3 1 23 447 470 447 470 0.98

4 16 5.4e-05 0.012 17.6 2.7 1 23 485 507 485 507 0.98

5 16 9.7e-05 0.021 16.8 0.2 1 23 537 559 537 559 0.97

6 16 4.3e-05 0.0094 17.9 1.9 1 23 565 587 565 587 0.98

7 16 8.4e-06 0.0018 20.1 1.0 2 23 689 710 688 710 0.97

8 16 4.8e-06 0.0011 20.9 3.1 1 23 716 738 716 738 0.98

9 16 2.3e-05 0.005 18.7 0.8 1 23 744 767 744 767 0.98

10 16 0.00019 0.041 15.9 1.2 1 23 778 800 778 800 0.98

11 16 8.2e-06 0.0018 20.1 1.0 1 23 812 834 812 834 0.98

12 16 0.0064 1.4 11.0 2.1 1 23 840 862 840 862 0.98

13 16 2.3e-05 0.005 18.7 0.3 2 23 868 890 867 890 0.95

14 16 0.009 2 10.6 0.9 1 23 898 921 898 921 0.98

15 16 6.9e-05 0.015 17.2 0.2 2 23 930 952 930 952 0.95

16 16 0.00061 0.13 14.2 1.3 2 23 958 979 957 979 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00017	0.036	16.0	1.1	2	23	392	413	391	413	0.97
2	16	8.6e-06	0.0019	20.1	0.8	1	23	419	441	419	441	0.98
3	16	8.7e-05	0.019	16.9	0.3	1	23	447	470	447	470	0.98
4	16	5.4e-05	0.012	17.6	2.7	1	23	485	507	485	507	0.98
5	16	9.7e-05	0.021	16.8	0.2	1	23	537	559	537	559	0.97
6	16	4.3e-05	0.0094	17.9	1.9	1	23	565	587	565	587	0.98
7	16	8.4e-06	0.0018	20.1	1.0	2	23	689	710	688	710	0.97
8	16	4.8e-06	0.0011	20.9	3.1	1	23	716	738	716	738	0.98
9	16	2.3e-05	0.005	18.7	0.8	1	23	744	767	744	767	0.98
10	16	0.00019	0.041	15.9	1.2	1	23	778	800	778	800	0.98
11	16	8.2e-06	0.0018	20.1	1.0	1	23	812	834	812	834	0.98
12	16	0.0064	1.4	11.0	2.1	1	23	840	862	840	862	0.98
13	16	2.3e-05	0.005	18.7	0.3	2	23	868	890	867	890	0.95
14	16	0.009	2	10.6	0.9	1	23	898	921	898	921	0.98
15	16	6.9e-05	0.015	17.2	0.2	2	23	930	952	930	952	0.95
16	16	0.00061	0.13	14.2	1.3	2	23	958	979	957	979	0.97

Sequence Information

Coding Sequence: ATGTCTGTTAAGCTAGATGACACGGTTTGTCGCGTTTGTTTAAGTTCCTCGGGTAACATACTCATCTTCGATGGATGCGGGAAGGATGACCAGTTTCGCTATTGCACTTCTTTAGAGGCTTCGGAGGACGATGGACTACCATCGAAGCTTTGCAAAAAATGCAACGATCATCTCAAGGTTGCCTATGACTTTCGCTTCCAAGCGATTTACGCGGAGAAGTATTTCAGAAAGACAATATTCCTGCCCGCGTTGAAGAAGGAAGATGGGAGCTTTACGATCATTAACGAGGGACGCAATGGGAGCGATGAACTTGATGAGAATATGGCCGAGATCGACATGCTACTTGCCAATCATTCGGACGCAGTCGAAGATCCTGACAATGACAATGATGACATGGACAATGGTGGGttctatgatgatgatgatgaaagctGCGATGATCATAAACACGTGGAGGTAATTGGGATGGAAACATTCGAAAGGGAACAGCGTGAACAGAGGGAGCAAAAGATTAAAATCGAACTTGCCAGCGTTCCCCCGCCGGTGGTAAGTAGCATCCCTTATGTGCCACCAGCACCAGTGACGAACGCACAGCAGCAAGACACGATAAACAAGAGTTGCCTTGAACAACCCCAGTCCGATGTGCGTGAAATACAGCATTTTGCAGATCCCGAGCCTTACACGCCGCAACCCTTGCAAAGACTGCCTCTCCAACCACAGGAGGAACGATCTCTTGAACTGGAAATCATGCCAGTTATGAAGTGCGACCCAACCGCCTATGACTACAGTGTGCCTACAACGATCGGTGTAGCGTTTGAGTCCTACAACGGAACGCCACAGATGACGTATCCTCTACCGACGCAATACGACTCGACGCCGGTTGGACAAAATTCCTCATTGCCTCTACAAGATGCTGGTCAACCGCCAGCTACAAGCTACGATTATGCTTACCAGCCTCAATACCCACCATATAATGCACAGATAGCCGATGCTAGACCTGAGGAACCAGTTGTTACATCTGTACAGCAAGGGCACCAGCAACATACCTCCATAGCCACAGCGCCTCCACTTGAAAGTGAATTGAGAAATTCATCAAAGACTGAAAATACGGAGGTGGCAGACTCCAAGTCGAAAAAACCTAAACGTGACGTGCATGGTCGTAAGGATAAGATCGAGTGCAACATCTGTGGAAGTATATTCACCCATTTGAACTCGTTAAAAACCCATCTCCTCAAGCACTCTGGGGAGAAGCCGTTCCGCTGCGAGTTTTGCGGCAAAGCCTTCGCCCGAAAGACAGTTCTCAacatccaccgacgtctgcacACCGGAGAGAAGCCGTATAAATGCACCCTATGCCCAAGTGCCTATGTGACCAAGGAAGCTCTGACACGACACTTGCAAAAGGACCATGAACAGGAGGTTGGTGCGAACTTCCGAAAGGACAAGGTCTCCTACATCTGTTCTATTTGTAATAAATCCCGATGTTCCAAGTACTCGCTCGCGTCACATATGAAAATCCACAATACCGACGCGAAATCACGTCGCAAAGTTGTTCGTAGGAAAAAGGAGAAAGCCGATGGATCGTCATCGACCAGTGCGCCCTTGAAGTATTCATGTAAAGTCTGCCAGAAAGGTTTTCCCAACAAATGGGAGCTTAGTACACACGCCGAGTCGCATGATATGAACAAGACCTTTGAGTGTGACATTTGCCAACGGACGTTTGAAAAGAAGTTCCAGTTGTTGTACCACCTTCAGACGCATGACGGTGGCGAAGAGCTGCTGAAAGCGAAAGTGCAACCTCAGTCACAGCCAAGTAGCGATAAACAGTCGTCGAAAACTACAGTCGTGGACGGGGGAGGCGAAGGTGTGTCTGAGAAGAAGAAACGGCCGGTGAGAGTGCGTcggaaaagtaaaacaaaaattcgatGCGATAATAGTGGCGAAGAAACAGATGGCGGGAAAGGGGAGGATGAAGAATTCAAGCCACCTTCAGAGAAGACAATCAAAAGAACAGCAAGAGCCCAGCGGGAAAACCTGAAGATCCTTCGAGCCAGTAGTAAAATTGAGTGCCATATATGCGAGGCTGTGTTTACGCATCCGACCTCATTGAAAACGCACATGCTGGTGCATTCGGGTGAACGACCATTCAAATGCGATCATTGTGATAAGTCATTTGCCCGAAAGACGGTCCTCAACATTCATCGGAGGCTGCATACGGGAGAGAAGCCTTACAAGTGCCCGCTGTGCGACAATGCCTGTGTTACTAAGGATGCCTTAATGcGCCATATGTCGAAGGACCACGATGATGATCGAGAAGCTGATCGAATCAAGTTCACCTGCGGCATCTGTCACAAGGCGATGGGCACGAAATATTCCCTCCAAGCTCATATGAAATTACACGAGCAGAACTCTACACCGGACGACGAAATGAAGTACTCATGCAACACCTGCACCGAATCTTTCGATTCCAAGTCAGACTACACGAATCACATGGAAGTACACGACTCGCATCGAAATTTCCAATGCGACATCTGCCAGGAGACGTTCGAGAAGAAGTTCAAACTGCTGTTCCATCTGCAAACGCACAAAATCGAAGATCTCCCATGCAAAAAGTGCGGCGAGACATTCACGATCAGGGAAAATCTCATTCAACACATCAAACTGCAGCATATGGACCCCCGCAACATGGACTTTCAGTGCCCACATTGCAATATTGGACAGTACGATACTCGCGACCTGAAACTCCACATGCAAACCGCGCACGACGTTACCATGGGCGGACTGAATTCCTGCGACTTGTGTGGCGAGAGTTACTCCACTGCAGCCGAATACTACAAGCATATGCGCGAGAAACATGACACTATCAGTAAAACGTGCAATGAATGTGAAAAATACTTTGACTCGAGGAAAGCGTTTGATAAGCACATATTGACACACTACATGTAG
Protein Sequence: MSVKLDDTVCRVCLSSSGNILIFDGCGKDDQFRYCTSLEASEDDGLPSKLCKKCNDHLKVAYDFRFQAIYAEKYFRKTIFLPALKKEDGSFTIINEGRNGSDELDENMAEIDMLLANHSDAVEDPDNDNDDMDNGGFYDDDDESCDDHKHVEVIGMETFEREQREQREQKIKIELASVPPPVVSSIPYVPPAPVTNAQQQDTINKSCLEQPQSDVREIQHFADPEPYTPQPLQRLPLQPQEERSLELEIMPVMKCDPTAYDYSVPTTIGVAFESYNGTPQMTYPLPTQYDSTPVGQNSSLPLQDAGQPPATSYDYAYQPQYPPYNAQIADARPEEPVVTSVQQGHQQHTSIATAPPLESELRNSSKTENTEVADSKSKKPKRDVHGRKDKIECNICGSIFTHLNSLKTHLLKHSGEKPFRCEFCGKAFARKTVLNIHRRLHTGEKPYKCTLCPSAYVTKEALTRHLQKDHEQEVGANFRKDKVSYICSICNKSRCSKYSLASHMKIHNTDAKSRRKVVRRKKEKADGSSSTSAPLKYSCKVCQKGFPNKWELSTHAESHDMNKTFECDICQRTFEKKFQLLYHLQTHDGGEELLKAKVQPQSQPSSDKQSSKTTVVDGGGEGVSEKKKRPVRVRRKSKTKIRCDNSGEETDGGKGEDEEFKPPSEKTIKRTARAQRENLKILRASSKIECHICEAVFTHPTSLKTHMLVHSGERPFKCDHCDKSFARKTVLNIHRRLHTGEKPYKCPLCDNACVTKDALMRHMSKDHDDDREADRIKFTCGICHKAMGTKYSLQAHMKLHEQNSTPDDEMKYSCNTCTESFDSKSDYTNHMEVHDSHRNFQCDICQETFEKKFKLLFHLQTHKIEDLPCKKCGETFTIRENLIQHIKLQHMDPRNMDFQCPHCNIGQYDTRDLKLHMQTAHDVTMGGLNSCDLCGESYSTAAEYYKHMREKHDTISKTCNECEKYFDSRKAFDKHILTHYM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00688865;
90% Identity: -
80% Identity: -