Mequ045465.2
Basic Information
- Insect
- Merodon equestris
- Gene Symbol
- grau
- Assembly
- GCA_958301585.1
- Location
- OY284417.1:88688663-88696379[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 34 0.098 21 7.3 0.9 2 23 209 231 208 231 0.91 2 34 7.5 1.6e+03 1.4 0.1 6 23 240 257 240 257 0.92 3 34 0.00021 0.046 15.7 0.6 1 23 263 285 263 285 0.98 4 34 4.1e-06 0.00088 21.1 1.7 1 23 293 315 293 315 0.99 5 34 0.00026 0.056 15.4 2.3 1 23 321 344 321 344 0.96 6 34 0.0045 0.97 11.5 0.5 3 23 352 372 351 372 0.96 7 34 6.2e-05 0.014 17.4 0.5 2 23 381 403 380 403 0.97 8 34 0.00041 0.09 14.8 0.0 1 23 410 433 410 433 0.96 9 34 0.0013 0.29 13.2 0.2 1 18 439 456 439 456 0.95 10 34 0.3 66 5.8 0.5 2 23 636 658 635 658 0.95 11 34 0.032 7.1 8.8 1.9 6 23 667 684 667 684 0.97 12 34 0.00011 0.023 16.6 2.7 1 23 690 712 690 712 0.99 13 34 1.2e-06 0.00026 22.8 3.5 1 23 719 741 719 741 0.97 14 34 1.1 2.4e+02 4.0 0.9 3 23 748 766 747 766 0.76 15 34 5.5e-05 0.012 17.5 0.5 2 23 775 797 774 797 0.96 16 34 0.00055 0.12 14.4 0.6 1 23 804 827 804 827 0.95 17 34 0.088 19 7.4 0.1 1 11 833 843 833 846 0.92 18 34 0.089 19 7.4 0.4 2 23 1130 1152 1129 1152 0.95 19 34 1.8 4e+02 3.3 0.1 6 23 1161 1178 1161 1178 0.98 20 34 0.0013 0.29 13.2 2.1 1 23 1184 1206 1184 1206 0.98 21 34 6e-05 0.013 17.4 1.5 1 23 1214 1236 1214 1236 0.99 22 34 0.00087 0.19 13.8 0.6 2 23 1243 1265 1242 1265 0.88 23 34 4.8e-05 0.01 17.7 0.4 3 23 1273 1293 1271 1293 0.95 24 34 0.00029 0.062 15.3 0.2 2 23 1302 1324 1301 1324 0.95 25 34 0.00053 0.12 14.4 0.1 1 23 1331 1354 1331 1354 0.94 26 34 0.0065 1.4 11.0 0.2 1 16 1360 1375 1360 1376 0.89 27 34 2.9e-05 0.0064 18.4 1.6 1 23 1671 1693 1671 1693 0.99 28 34 0.08 17 7.6 6.8 1 23 1701 1723 1701 1723 0.98 29 34 7.1e-06 0.0016 20.3 0.3 1 23 1731 1754 1731 1754 0.96 30 34 0.0065 1.4 11.0 0.2 3 23 1762 1782 1761 1782 0.96 31 34 7.1e-05 0.015 17.2 0.7 2 23 1791 1813 1790 1813 0.97 32 34 0.00022 0.047 15.7 0.5 1 23 1820 1843 1820 1843 0.94 33 34 1.9e-06 0.00041 22.1 1.0 1 23 1849 1871 1849 1871 0.98 34 34 4.8e-05 0.01 17.7 5.0 1 23 1877 1900 1877 1900 0.98
Sequence Information
- Coding Sequence
- atgttgtgttatctGTGTTTGGGCGCATCCGACCGGGTCATACCCATTTTCGAAAAGCAGGGGTTGGATCTCAATGTCAGCAATGTAATCATCAAGCACTTCTGGCTCCAACCAAATCAGGATGACGAAAATGCCCGCGTGATATGCCATGATTGTTGGAACGCCCTTGATTCCTTTCATAAATTCTATGAGAAAGTGGAGGCAGCCCATCATACACTGCTTATCGTCGAACACACGCTCAAGGAGGAGGAGAAGGAATCAATTGGTGATCAGTTTGACACTTGCAATGACTCTCTTACGACAGATGTGAAACTTGAAGTGAAAGAAGATTCGCTGCAGGATGAAGCTCTACCTGATACGCAGCAAAGTGAAGCTTCAGTAGAGGACTCTGATTCTGACTCTGAAGCTCCTCTTGCTACGTTGGTAGAGCATCAAAAATCGGAAAACAATCCATCGACTCTGAAAGACCATCGAATAAGTCTCCCAAAAAGACAAAGAACGGCCTGGAAGAAAGCGAATAGCGACACCAAGAAGCAACGAGCGAATAAACGAATAGTCGATCATGTTAGGAACCGTGAACTGAGTCGAGAATACGACAGAGTCATTGAAGAAAACATGAAGCTTTCGTGCGATATCTGCCACGAACCAATAAAGAATTTCTACCTCCTCCGGAAACACTTCAACGACGTCCACGGAGAGCTTGGGTATGCCACGTGCTGCGGTAGAAAATTCCGCAAGCGGGGCATTCTCGTCGATCACATTTACCTGCACTTAAATCCCGAACACTTCAAGTGCAGCAAATGCGAGAGGGTGCTGGCAGACCGACGAAGCTTAGAAGTGCACATGTTTACCCATGACACGACTAAGGAACGTAAATACCAATGCGAGGAATGCGATAAAAGTTTCTATCGGAAACTCCTACTCGACCGTCACATGTACACGCATATTCCCGATCGAAAATTCACCTGTGATACGTGCCAAAAACAGTTCTCGTCGAGGTTTACACTTCGACAACATGTCAACAACGTGCACAACACGTCGTATCTGAAAATCTGCGAACATTGCGGCAAGTCTATTCGAGGTCTCGAGGCATTTCAACGACATCAGCTCGAACACACTGGTGAGCCTTTACCTGCGGTGCAGTGCGAGAAGTGTGGTGTTAAGCTTAGAAACAAGTATGGTCTCAAGAGGCATATGGAGACGCTGCATCCGGTGAAGAAGGTGTTGTACGTATGCACGGAATGTGGAAAAATAGCCCCAAGTGCCCCAGCATTGCAAAGGCACATGTCCTACATGCATCAGTGCGAGCGGAGTCATAAGTGTCCAATGTGCGAGAAGGCTTTCAAGAAACCAGGAAATCTCAGGAAAATGTTGTGCTTCTTGTGCACCAAGCAGTCCGATCAGTTCCTGGGCATCTTTGAAACCAATGGGCTTGCTCAGGACATGAACAACATCATTCGAAAACACTTTTGGCTTAAGCCAGAGGCAAATGATCCAGAATCGTGTGCCGTGTGCTGGACGTGCTGGGATGCCCTCGATGCTTTCCACAAATTCTATCAAATGGTCGAAGCAGCTCATGCTAAATTGGCGAACGTGAAATTATTACCAGACGAGCCCAAGCCTGCTCTTCTCACTCCTGGAGGAGAAGATGGAGTCACATCCGAAGTCTCTATTCCAGGCGTTAAAATCGAATCAAATGAAGAATCCAATTGTGCCGAGTTCAATAAGGAAAAGAAGGAAACCTCGGAATCTGATTCCGAAACCCCCCTCATCGTGTTGAGTAAACGAAAACAACAAGAGACGAAGGAAACCACCGAAACCAGTGATTTAAAGAGTGATCCTTCCAAAGGCAAGCGAATTTCCTGCCGCGAATTCGACGAAATCATCAAACGAAACATTGATCTCACCTGCAATAACTGCCAAGTCTCGTTAGAAAGCTTCTTTGGCCTCAAAAATCACTACCAGTCCGTCCACAACGAAGTCGGCTATGTCATCTGCTGCGGCAAGAAATTCGACAGTCGCCACACTCTGGCACATCATATCATATTGCATCAAAACCCCGACTGTTTTAAATGCAGCACATGCAACAAGGTCTTGGCGAATAAGAAGAGCTTCCGAAATCACCTCAACACGCATGTGAACAAGGAGCGCGCTCACCGGTGTGACAAGTGCGGGAAGAGTTTTacgaagaaagaaaaactgGAGCGGCATATGCAGGGGCACGTGAAGCCGGAGAGGATTTGCGAGCAATGCGGGAAGGTCACCCGCAATTTAAAGCAGCACCAATTCCGGGAGCACTCGAACGAGCCGCGAAAACGAATACAATGCCAAAAGTGCGGAACGTCCTTGGCTGATAGCTCCAGCCTCAACACGCATATGAAATACCAGCATCCCACGAAGGAAACACTGCACGTTtgcagcatttgcgggaagatATCTTCGTCCGGATATGGTCTGAAGAGGCATATTCAGTATATGCACAAGTCTGAACGACGGCACAAGTGTCCGATGTGCGACAAGGCGTTCAAACTGGCACAGATCCTCAGGAGCAGGGAAAAGAATCGTAGAAATAGTAAAATCCGTTTTATTCCACGCCCGAATGCAAAAATGCTTTGCATCCTCTGCGTAAGCCGCTCCGACAATGTGATTCCCATATTCGAAGAGAAGGGCAGCGCCTTGCACATCAGCGAAATCATTATCAAACACTTTTGGCTGCAGCCGAATGCCGATAATGTGAATACAAACGTCATATGCGCGTCGTGTTGGTCGGCGCTTGAAGCGTTCCATAAATTCTACTTGCAAGTCGAGGAGGCCCACGAGAAATTGCTAAAGGCAAAAGCGGTCGTTGAAAACAATGACCTGAAACTAGAGACTGAGACTGGCCAGAACAATAACGTGTGCGATGACGAGTCATTCGGGGAATTCGAACCGGAGTTGCTGAATGCAGACATCAAATTGGAGGTGCAGGAGGATGTGGAGGTAAACCTCCCGAGCGAAACGCAATCAGCCAGTGAGAACGATAAGGAATACAAGAAATCCGCAGCATCCCAAAACAATCGCACAACACGAAGCCGGACTTCCACAGAAAAATCATACAACGACTACTCAACCGACGACAGCGACGGTGACGGCAACCACCGTCCCAGTTCTTCAACCGATTGGCAAGATCAAAACTCAGACGACGATGATGACAGTGACTACGAGGATAGTGCGtcaaaatcaaaaccaaaatcaCAGCTAGAACGGTCTTCCAAGAAACGCGGTCGCCCGAAAAAGGGCGAAGTCCGCGAATCACCGCACAAGAAAAAGCGCAGTTCGGAAAGTCAATCGAAGAAAATGGAACGAGTCCGCGAGTATGACGAGATTATAGCGAAGAACGTCAAACTCTCCTGTGCCAATTGCTTGATGGACTTCACCAACTTTGCAGTTCTCAAGCGACACTACCGTTCCGCGCACAACGAATGCGGCTACGCAACCTGCTGCGGCAAGAAGTTCCTCAAACGCGGTCTGCTCGTCGATCACATTTACACCCATCAGAATCCCGAGTATTTTAAATGCGAGAAATGTGGCAAGGTGCTCGcgagcagaaagaacctcgatTGCCATATGCTGACGCACGACACACAGAAACAACGACTTTACCAGTGCGATCAGTGTACGCTGAGTTTCTTCACAAGACCATTGCTTACGCGACACCTGCAGACGCATATATCCGAGCGCAATATCAAATGTCCCGATTGTGATAAGTTCTTCTCCACGCAGGACATCCTGCGGACACATTTCTATAATGTTCACAATGCAGCTTACACGACGATTTGTGATCAGTGTGGGAAGTTATTTCGACGGCCGGACGCATTCCGGCGGCATCAGTTGGAACATGATGGCATTATGCAACCGTTGGTTCCTTGCGAGAAGTGTGGCGTGAAGTTAACCAGCAAATATGGACTGAAGCGGCACATGGAGTCGATGCATCCCGAGACGGAAGTCACGCATGTGTGTAATACGTGTGGGAAGGTTGCACCGAGTGCGGCAGCGTTGCAGAGGCACATTTCCTATATGCACAAGATGGAGAGGAAGTACAAGTGTCCTATGTGCGATAAGGCTTTCAAAAAGACCGGCGCGCTCAAGCCGAAAAAGGATGACGAAAATGCTCGATTCATATGCAATTCATGTTGGGACGCGTTGGATTCATTTCACAAGTTCTACTTACGAGTGGAACAGGCTCATATTACATTGGAAAGCACACAACCAACTGTCGATATCGGTTTGAAACAGGAACAAGACCAGGCAGCAGGACAAGATCCTGAAGATAAtgaaaaatttgaaacttgtgtTGATTTCTTGAATGCAGACGTCAAGCTTGAGGTCAAGGAAGATTCCGAACTTTGTCTGCAGCAAATCAATCCACTTCCAGATATCGAAGACAGGATTGAAATAAACCACATTGGATTGTCACAAAACAAACACTCTCCAGTCTCCAGCGATTCCGAAGATTCTGAATCTGAAATACCACTAGCTAACTTAGCCAAAAGCAATCCGCgaaagaaacgaaaaacaatCACCAATTCGGGCCAGTCGGATCACGATGGGCCGGACTCATCGCCAGATTGGGAAGATCAACATTTCAACAAcaacgacgatgatgacgacgacgacagtGAATACGAAGTTAAGAAACAAGCGCCAAaagcgaaaacaaaacaaataacaaaaactgGCAAGAAACGTGGCCGGCCGTGCAAAAACGCACCCAGAGTGGTCATCCCAAAGAAAACCACCGAAGAGCAAATCAAAAAGCGAGAGCTCTCCCAAGAGTACGATGAAATCATACAAAAGAACATGAAGCTAGTCTGCAACGTGTGCATGTTGCCACTAGCCAACTTCTTCATTCTCAAGAAGCACTATCGCGCTAAGCACAACGAACGTGGCTATGCTTCGTGCTGCGGCAAAAAGTTCCTCAAACGCGGTATTCTTGTCGATCACATCTACACTCACTTAAATCCCGAGCATTTCAAATGCGACAAGTGTGATAAGGTATTAGCGGATCGACGATGTCTCGAAGTCCACATGAACACTCACGTAACTGAGAAGCAACGCATCTACCAATGCAACCAGTGCTGCAAGAGTTTCTTCAAAAAACCCTTGCTCACGCGTCATTTGCATATTCACATCCCACAAGAGGAACGCAAATTCCCCTGCGAAGAATGCAACAAATTTTTCCCGTCTAACTATACCCTGCGAGCACACATCAACAACGTGCATCAGAATGCATACGCCAAAATCTGCGATCAATGCGGCAAATCAATACGCGGTCGAGAAGCATTCCAAAGACACTTGCTCGAACACGCTGGCGTTCCCATACCCAGCGTGCAATGTGACAAATGCGGTGCAAAATTGAAGAACAAATACGGCCTCAAGCGTCACATGAATTCCATGCACGCTGAAGTCAATATACCGCATGTGTGCAACATTTGCGGCAAAACAGCTCCCAATAACACAGCTTTACAGCGTCACTACTCGTACGTGCATAAGTGCGAGCGTAATCATAAGTGTCCCATGTGCGATAAGGCATTCAAAAAAGCCGGCGGTCTTAAAGAGCACATGACAACCCATACCGGCGAGGTACTTTACACCTGTCCACATTGCCCGAAGACGTTCAATTCGAATGCGAACATGCATTCGCACCGTAAGAAGATGCATCGCACGGAATGGGAGGCGAACAGGAGACACCCGCACATGGGATCCACCgagcgccgaatagaatag
- Protein Sequence
- MLCYLCLGASDRVIPIFEKQGLDLNVSNVIIKHFWLQPNQDDENARVICHDCWNALDSFHKFYEKVEAAHHTLLIVEHTLKEEEKESIGDQFDTCNDSLTTDVKLEVKEDSLQDEALPDTQQSEASVEDSDSDSEAPLATLVEHQKSENNPSTLKDHRISLPKRQRTAWKKANSDTKKQRANKRIVDHVRNRELSREYDRVIEENMKLSCDICHEPIKNFYLLRKHFNDVHGELGYATCCGRKFRKRGILVDHIYLHLNPEHFKCSKCERVLADRRSLEVHMFTHDTTKERKYQCEECDKSFYRKLLLDRHMYTHIPDRKFTCDTCQKQFSSRFTLRQHVNNVHNTSYLKICEHCGKSIRGLEAFQRHQLEHTGEPLPAVQCEKCGVKLRNKYGLKRHMETLHPVKKVLYVCTECGKIAPSAPALQRHMSYMHQCERSHKCPMCEKAFKKPGNLRKMLCFLCTKQSDQFLGIFETNGLAQDMNNIIRKHFWLKPEANDPESCAVCWTCWDALDAFHKFYQMVEAAHAKLANVKLLPDEPKPALLTPGGEDGVTSEVSIPGVKIESNEESNCAEFNKEKKETSESDSETPLIVLSKRKQQETKETTETSDLKSDPSKGKRISCREFDEIIKRNIDLTCNNCQVSLESFFGLKNHYQSVHNEVGYVICCGKKFDSRHTLAHHIILHQNPDCFKCSTCNKVLANKKSFRNHLNTHVNKERAHRCDKCGKSFTKKEKLERHMQGHVKPERICEQCGKVTRNLKQHQFREHSNEPRKRIQCQKCGTSLADSSSLNTHMKYQHPTKETLHVCSICGKISSSGYGLKRHIQYMHKSERRHKCPMCDKAFKLAQILRSREKNRRNSKIRFIPRPNAKMLCILCVSRSDNVIPIFEEKGSALHISEIIIKHFWLQPNADNVNTNVICASCWSALEAFHKFYLQVEEAHEKLLKAKAVVENNDLKLETETGQNNNVCDDESFGEFEPELLNADIKLEVQEDVEVNLPSETQSASENDKEYKKSAASQNNRTTRSRTSTEKSYNDYSTDDSDGDGNHRPSSSTDWQDQNSDDDDDSDYEDSASKSKPKSQLERSSKKRGRPKKGEVRESPHKKKRSSESQSKKMERVREYDEIIAKNVKLSCANCLMDFTNFAVLKRHYRSAHNECGYATCCGKKFLKRGLLVDHIYTHQNPEYFKCEKCGKVLASRKNLDCHMLTHDTQKQRLYQCDQCTLSFFTRPLLTRHLQTHISERNIKCPDCDKFFSTQDILRTHFYNVHNAAYTTICDQCGKLFRRPDAFRRHQLEHDGIMQPLVPCEKCGVKLTSKYGLKRHMESMHPETEVTHVCNTCGKVAPSAAALQRHISYMHKMERKYKCPMCDKAFKKTGALKPKKDDENARFICNSCWDALDSFHKFYLRVEQAHITLESTQPTVDIGLKQEQDQAAGQDPEDNEKFETCVDFLNADVKLEVKEDSELCLQQINPLPDIEDRIEINHIGLSQNKHSPVSSDSEDSESEIPLANLAKSNPRKKRKTITNSGQSDHDGPDSSPDWEDQHFNNNDDDDDDDSEYEVKKQAPKAKTKQITKTGKKRGRPCKNAPRVVIPKKTTEEQIKKRELSQEYDEIIQKNMKLVCNVCMLPLANFFILKKHYRAKHNERGYASCCGKKFLKRGILVDHIYTHLNPEHFKCDKCDKVLADRRCLEVHMNTHVTEKQRIYQCNQCCKSFFKKPLLTRHLHIHIPQEERKFPCEECNKFFPSNYTLRAHINNVHQNAYAKICDQCGKSIRGREAFQRHLLEHAGVPIPSVQCDKCGAKLKNKYGLKRHMNSMHAEVNIPHVCNICGKTAPNNTALQRHYSYVHKCERNHKCPMCDKAFKKAGGLKEHMTTHTGEVLYTCPHCPKTFNSNANMHSHRKKMHRTEWEANRRHPHMGSTERRIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -