Mequ028010.1
Basic Information
- Insect
- Merodon equestris
- Gene Symbol
- -
- Assembly
- GCA_958301585.1
- Location
- OY284415.1:25097325-25112145[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.7e-12 1.7e-09 38.7 0.0 4 41 184 221 181 223 0.94 2 3 5.8 3.7e+03 -0.8 0.0 28 37 255 264 251 268 0.83 3 3 9.5e-10 6.1e-07 30.6 0.0 3 38 293 328 292 330 0.92
Sequence Information
- Coding Sequence
- ATGCGCCTGCGGATATCAAGGACGCAGTGGAGTAGAGCCAGAACACAAAAatatgacgtcgaaaagctACTATCGCCAGGAACTGCCAGTGCTTTTGCCAAACGTGTTTCCCTTAAGCTCTCCTATGCACCCCCATTCCCCACTCAGTCAATTGAGAAACAATCGAAGTTCTGGGCCACAAGGTTCCATCACGCAGGAACAGCTGGTTCGATGACAAGTGAAGAATACAAAATCGAACCCTCGCTGCCATTCACACCTGTTCACACTATTCCCGCCGGCATATCGTCTTCCGATCAATATATCATATTCGAATTGAAAACAGACACGGAGCCCGCGTGCAGCTACGTTATAAAACAGACTGAAAGCCAATTGCCATGTGACGATGATATCGACAAATTGTCATTTGCTGAGGATTCAAGTAACAGTCTGAATGACCGTAAACGTCAACTAAACCCGTCTCCATTGGTTATAAATGTCCAGATAGCAGGCGAAAGTGCCGAGGAGAGGGAAAAGAAACTACGAAGATCCGCACAGGCTTTAAGGCAGAAACAACTCGAAAAAGCCGTTGAGGCTGTCGTTAATAATGAAATGACGATCAGCAAAGCTGCCAGTACATTCCAAGTGACAAAGAGCACCCTCTGGCGAGTGGTGAACAAGCACACAAATATTCGTAAGAAAAAGATCGACGAAGAACTGAACAAGACAATTGCAGATCGCATATGTGCCGGCGAGTCTCTCTCAACCATTTCGCGATCGTTAAAAGTACCCAAGTCGACTATACATCTGCACAAAGTCCGATTGGCGCGGAGTGGTCAACTTCCGTCGAATGTGAAGCTGAGACCGGCTCCAAATTCAGCAGAAGATCTCGCGGTGAAGGATCGCATTATTCAGGCATTTCGCGCTTGTCGAGTGAATGGCATGTCTATACGTTTTGCTGCCAGATTTTTCTCAATACCTCCTTCGACGCTATGGAAGCATATAAATAGCTTTAGAGCGGCTCAGAAGGCACAGGTAGTAGCAGCTACGGTTAATATGAAAACAGAGAGTGTCGATGAGGTCGATGAAGCGGTAGAGATTGAATCGTGTGACAGTGCGGGGAAGGAAACTCAAGTGGAAGAGGATCATAACGAGGGCAGAGACGAAAGGACGGATTCGAATAACTACACAGACCCAATGGAGATAAGTAGCGAGGATGGTGACTTTCTCATTACGTTCGACTTTGAAGCATTTGAGAAATATGTAAAGCGGGAGCTGGAGTAA
- Protein Sequence
- MRLRISRTQWSRARTQKYDVEKLLSPGTASAFAKRVSLKLSYAPPFPTQSIEKQSKFWATRFHHAGTAGSMTSEEYKIEPSLPFTPVHTIPAGISSSDQYIIFELKTDTEPACSYVIKQTESQLPCDDDIDKLSFAEDSSNSLNDRKRQLNPSPLVINVQIAGESAEEREKKLRRSAQALRQKQLEKAVEAVVNNEMTISKAASTFQVTKSTLWRVVNKHTNIRKKKIDEELNKTIADRICAGESLSTISRSLKVPKSTIHLHKVRLARSGQLPSNVKLRPAPNSAEDLAVKDRIIQAFRACRVNGMSIRFAARFFSIPPSTLWKHINSFRAAQKAQVVAATVNMKTESVDEVDEAVEIESCDSAGKETQVEEDHNEGRDERTDSNNYTDPMEISSEDGDFLITFDFEAFEKYVKRELE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -