Basic Information

Gene Symbol
Kdm5
Assembly
GCA_958301585.1
Location
OY284418.1:18681396-18687776[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-24 6e-21 76.2 0.0 2 89 163 246 162 246 0.95
2 2 7.2 3.9e+04 -3.3 0.0 48 65 1055 1072 1054 1080 0.79

Sequence Information

Coding Sequence
ATGTCAAACAACAACTCAACTCAAACGAAAAGTGCAGTGGTGAATCTTTTAAAATCTCGTCCACCTTCAAATAACACTCATAGGCTTTCGGAATGCGATACAATAGTAGACACATCAATTCATAACTTCAATAAGGATGACAGCCTTAATAGTACCTATAAGAGTCAAGATCAATTGGGAAGCAATAATACACGCCTTAAAACCTATCCTCATCAACCTCATAGTTCATCTACattttcacaaaataaaaacgaagaatACCAATTCGAAAAGCCGCCTGAATGTCCTGTCTTCCAACCCAATGAAGAAGAGTTTAAAAATCCCCTGACTTATATTAGCAAGATTCGACCGATTGCTGAAAACTATGGCATCGTGAAGATACTGCCACCAAAGACATGGACGCCTCCTTTCACTGTTGACGTTGACAAATTAAAATTCACACCTCGGGTTCAACGGCTGAACGAGCTAGAAGCAAAAACTcgtattaaattaaatttcttagACCAAATTGCTAAATTCTGGGAACTGCAAGGGTCTTCGCTTAAGATTCCAATGGTAGAGCGGAAGGCATTAGACTTGTATTCATTGCATCGTATTGTACAAGAAGAGGGTGGTTTGGAGCAAACAACAAAGGAGCGGAAATGGTCAAAGGTTGCACACCGTATGCAATACCCACCGGGAAAGAGTATTGGTGCAATACTGAAAGGCCATTATGAACGGATACTTCATCCGTTCGACATTTATACTTCAGGAAAGGTAATAGACATAAAATTGGAGTCAGAGGGCGATGATAAGGATTACAAACCGCATGGTATAGTCTCACGGCAGCAGATAACTCCACCAAACGAAACAACAGCACGTCGATCAAAACGATTTGCTAATATGAATGCCAGCAAAGAATCAGCATGTGGACTGGGCTCATATTCAGCTAGTATTAAGGCCGAATTCGAAgacattgaaaagaaaacaaataaaattctgGGAAACCGACTAATTCGAATGCGTCCAGCAACTCTTGCGCCAGTAATAAATAACGATCCTTTAGCGAAATATATATGTCATATTTGCAATCGTGGGGACGTTGAGGAAGCAATGCTTCTTTGTGACGGATGCGACGACAGTTACCATACATTTTGTCTTCTGCCGCCGTTACATGATATTCCCAAAGGAGATTGGCGATGTCCACGCTGTGTAGTCGAAGAGGTCAACAAACCAACTGAGGCGTTTGGTTTTGAGCAAGCTCAACGTGAATACACTTTGCAGCAATTCGGCGAAATGGCGGATCAGTTCAAGGCAGACTATTTCCGTCGACCGGTACATCTTGTGCCAACTGATTTAGTGGAGCGTGAATTCTGGCGGATTGTCTCCTCGATTGATGAAGACGTTACCGTTGAATACGGTGCTGACTTGCATACGATGGATCATGGTTCAGGATTTCCAACGAAGAGTTCGTTATACTTACTACCAGGCGACCAGGAATACGCAGAATCCAGCTGGAATTTGAATAATCTTCCACTTTTGGAAGAGTCGATTTTGGGTCACATAAATGCTGATATAAGTGGAATGAAAGTTCCTTGGATGTATGTAGGCATGTGCTTTGCAACATTTTGCTGGCATAACGAAGATCATTGGAGCTATTCAATTAATTATCTTCATTGGGGGGAGCCAAAAACTTGGTACGGTGTCCCTGGAAGTGAAGCcgaattatttgagaaaactatGAAAAGTGCTGCACCGGAACTATTTGCTTCACAACCTGACTTGTTGCATCAGCTTGTGACAATTATGAATCCCAATATACTAATGAAAAATGGTGTTGCTGTCTATCGTACTGATCAACATGCAGGCGAATTCGTCATAACATTCCCACGAGCATATCACGCTGGCTTCAATCAGGGTTATAACTTTGCCGAAGCCGTAAATTTCGCCCCCGCGGATTGGCTAAAAATGGGTCGTGATTGCATAAATCATTATTCAACTCTGCGTCGATTTTGTGTGTTCTCCCATGATGAACTTGTCTGTAAAATGGCACTTGAACCGGAGAAGCTTAACTTCGCCATTGCAACGGCTTGTTACATTGACATGGTTAAAATGGTCGATTCAGAgcagaaacttagaaaaagctTACTCGAATGGGGTGTAAAGAAGGCAGAACGCGAAGCGTTTGAGCTTATTCCAGATGACACGCGGCAGTGCGAAGTTTGCAAAACAACGTGTTTCTTATCAGCCGTATCATGTCAATGTACAAAACAAATCGTCTGTTTGCGTCATTACTCTGAATTGTGTGACTGTAAGCCAGAATACCACTGTCTACAATATCGCTATACCTTAGATGAAATGCCATTAATGCTAAAGAAGTTGCAAAACAAAGCTCAGTGCTTTGAAGTCTGGTTAACCAAATGTCGTGACGTAGTCGATCCACATAATTCAGTCGATAAAATTACATTGGAGGAACTTCAAGACTTGGTACATGAAGCGGAGTGTAAGAAATATCCAAGCTCGATGCTTATAGATCGCCTAAACTCAGCCATACTAGAAGCAGAAAAATGTGTAACTGTCATTCAGCAGCTGGACATCAACAAAGTACGCACCCGTACTCGCCATTCAAATGATATAACAAAATACAAGCTAACAATGGATGAACTCGAACTGTTTGTTGAGGAAATCAATAATCTTTGTTGTGTAATTAAAGAAGGTCAGAGCGTACGGGAGCTTTTGATGCTAGGAAAACAGTTTGTCATTTCGGCCAAGCATATACtgagtaaaaaaattaacaaaatcgacgagaaagctattgagaaactcaTGGATGAAGGCTTTTCACTGTGTATCGAATTACATGAACTTAAAAGCCTTCGTCTGCGTTACGATCAGGTATCGTGGTACAATCGATCGCGACGTCTTCGAAATTCAAGTATAAAATTGCAAATGAACGATTTGAATCAATTAATCAGTGAAGGTTCGAACCTTATTCCCGATCCGCTCATCGAGAGAGAGATCTCTGCATTACAGAATATCATTATCTCAGCGGAGAGCTGGGAAAGATCTGTCAAAGCTTGTCTTCAATTAAATGCACCAAAAGACCTGGTGAGCATTGAGACGTTACTTGAAGTGGCTGATAAAATTCAGGTAGAAGTTCCATCCAAATCGATCTTAAAGgatgcagtcaagaaagcaaAGGAGTGGCTGCATATTGTTcaagttttgcaaaaaaatgaaCACTATCCCTATTATCACACCCTTGAATCAGTTATTAATCGTGGTTTAAATATTCCTCTGAAGCTTGACGAACTTGATCGCATTCAGAAACATCTTGACTCTGCTCGTGAATGGAAGGATAAAACAGCAAAAGCGTTTCTACGCAAACACTTAAAATTCGAGTTATTGGATGTTTTGTCACCCCGCAGAAGTGCGCTTATGATTGGAAATATAAGCGCCAAACGTATCCCACCGGAGGAGCAATTCACAGAGACCCTAAACCCGGCACAAATGGTTGAAGTCTTTAAAAAAGCTGAAGAAAAAGAATTGCGTGACATGCGTGAGCTACGACGTATTAATATGGGCCGAAATCCGCTCGAGGACAGATTTTGCTTTTGCAATAGTAAATTCTCCGGTAGGATGTACCTATGTCAACTTTGTTTGAATTGGTTTCACCATGAGTGTGTACCCATTGTGACAATGAAAGCAACATCGACCATGTACCAGAGTCCCCATGCTGTGAAATATTTATGCCCATCTTGTATGAGATCCCGTCGACCGCGTTTAGAAGCCATTCTTTCATTGTTGGTCTCCTTGCAACGATTACCAATACGATTACCGGAAGGTGAAGCTTTGCAATGCTTAACTGAGCGAGCTATGAATTGGCAGGATCGCGCCCGACAAGCATTCGCAGCTGAAGACGTAGCCACTGCTTTAGCTGCCTTATCCATATTGTCGCAAAAAAAGTATTCGGAGATGAAAAACGACGGTGAGAGTAAGAATAAGACTACAACAAAAGCAGACATTGAAGAAACTGACGAAGAGATCACTGAATCAGAAATCGGAAACGACGACAGTGGTGGCGAGGATTACATTCTCATTCGTCGTTCTGAGGGTGAGGATGATGTACAAGAAGCCGAACATATGGAAGAGAATCACAGTTCAGAACATGTGGGTTGTTTTAAACTTCAAGAAGAGAATATGGATAATGAAACGGAATCTGTTCAAAGCACCATTACTTCTAATAAagaagtAGAACATGCCTATTCGGTTCCAACTGCAGGACTGTCACCAGTAAAGAGCGAAGCATCGACTGCACAATCATCAACGAAACAATCATCAATTCCAGTGGAATTGAAACGTTCCACTCGAGAAATGTTGGAGAATCTTATGATGGAAGGGGATTTATTGGAAGTGTCTCTAGAAGAAACAACTCATCTATGGAAAATTCTTAGTACAGCTAAACCGCTTAATTATGAACTAACACCAATTCAACAAATGTGCAAAGCATTCGTGaGCTCTGAACGAAGTCggaaaacagcaaaacatgaTAAGAAGAATAAAGATGAAAGTGTTGTCGAGACAGCGAAATTGGGAGATGCTGATGTCTCACCCACTAAGTCATCTTCATCGGGCTATTCAACAAATATGCGAAAGCGAAAACGCGCAATTAAAGTATCGTCCAAAAACAGTCTGCTAGCAGCATCTGATGACGATGAAGAATGTCGTGCCGAAAACTGTCATAAGCCATCAGGCCGGGAAGTTGACTGGGTTCAATGTGACGGAGGCTGTAACGAATGGTTTCACATGTTTTGTGTGGGTCTTGAGCGTAAACAAATCAAGCCCGATGATGACtatatatgcaaaaagtgcatggaaacaaaaatggaaAGTAACACTTGTGAGAAAGTTACATCGTGTAAtgttgtctctcaaacaccctcgACTGAACAACGAGAACGAGTACGTAATTTCTCATCAGATATTTCACCGACAAATACAACGTGTCTGTCATCAATGATAACGAACCCTAGTACAAATTCTAATGAAGATATCGTGAGTTAA
Protein Sequence
MSNNNSTQTKSAVVNLLKSRPPSNNTHRLSECDTIVDTSIHNFNKDDSLNSTYKSQDQLGSNNTRLKTYPHQPHSSSTFSQNKNEEYQFEKPPECPVFQPNEEEFKNPLTYISKIRPIAENYGIVKILPPKTWTPPFTVDVDKLKFTPRVQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPMVERKALDLYSLHRIVQEEGGLEQTTKERKWSKVAHRMQYPPGKSIGAILKGHYERILHPFDIYTSGKVIDIKLESEGDDKDYKPHGIVSRQQITPPNETTARRSKRFANMNASKESACGLGSYSASIKAEFEDIEKKTNKILGNRLIRMRPATLAPVINNDPLAKYICHICNRGDVEEAMLLCDGCDDSYHTFCLLPPLHDIPKGDWRCPRCVVEEVNKPTEAFGFEQAQREYTLQQFGEMADQFKADYFRRPVHLVPTDLVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEESILGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSEAELFEKTMKSAAPELFASQPDLLHQLVTIMNPNILMKNGVAVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRDCINHYSTLRRFCVFSHDELVCKMALEPEKLNFAIATACYIDMVKMVDSEQKLRKSLLEWGVKKAEREAFELIPDDTRQCEVCKTTCFLSAVSCQCTKQIVCLRHYSELCDCKPEYHCLQYRYTLDEMPLMLKKLQNKAQCFEVWLTKCRDVVDPHNSVDKITLEELQDLVHEAECKKYPSSMLIDRLNSAILEAEKCVTVIQQLDINKVRTRTRHSNDITKYKLTMDELELFVEEINNLCCVIKEGQSVRELLMLGKQFVISAKHILSKKINKIDEKAIEKLMDEGFSLCIELHELKSLRLRYDQVSWYNRSRRLRNSSIKLQMNDLNQLISEGSNLIPDPLIEREISALQNIIISAESWERSVKACLQLNAPKDLVSIETLLEVADKIQVEVPSKSILKDAVKKAKEWLHIVQVLQKNEHYPYYHTLESVINRGLNIPLKLDELDRIQKHLDSAREWKDKTAKAFLRKHLKFELLDVLSPRRSALMIGNISAKRIPPEEQFTETLNPAQMVEVFKKAEEKELRDMRELRRINMGRNPLEDRFCFCNSKFSGRMYLCQLCLNWFHHECVPIVTMKATSTMYQSPHAVKYLCPSCMRSRRPRLEAILSLLVSLQRLPIRLPEGEALQCLTERAMNWQDRARQAFAAEDVATALAALSILSQKKYSEMKNDGESKNKTTTKADIEETDEEITESEIGNDDSGGEDYILIRRSEGEDDVQEAEHMEENHSSEHVGCFKLQEENMDNETESVQSTITSNKEVEHAYSVPTAGLSPVKSEASTAQSSTKQSSIPVELKRSTREMLENLMMEGDLLEVSLEETTHLWKILSTAKPLNYELTPIQQMCKAFVSSERSRKTAKHDKKNKDESVVETAKLGDADVSPTKSSSSGYSTNMRKRKRAIKVSSKNSLLAASDDDEECRAENCHKPSGREVDWVQCDGGCNEWFHMFCVGLERKQIKPDDDYICKKCMETKMESNTCEKVTSCNVVSQTPSTEQRERVRNFSSDISPTNTTCLSSMITNPSTNSNEDIVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-