Mmel167053.1
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- NFX1
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010002207.1:183972-185708[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 0.35 7.7e+04 -2.7 1.6 15 19 176 180 175 180 0.81 2 6 0.023 5.1e+03 1.1 0.2 4 10 209 215 208 217 0.95 3 6 4.3e-06 0.95 13.0 11.3 4 19 224 239 222 239 0.92 4 6 0.042 9.2e+03 0.3 0.4 5 10 264 269 264 271 0.93 5 6 1.1e-07 0.024 18.1 12.3 1 18 275 292 275 293 0.94 6 6 1.5e-11 3.2e-06 30.5 13.4 1 19 333 351 333 351 0.98
Sequence Information
- Coding Sequence
- ATGAACTTTGGGCAGACCATAGCGTTATCTGATCCTAGCCTCGCCAGGTTGTCTTACCTGGCTAGGCTGCCGTTAACAGCACACACACGTTCGACGTCCACTAAGAGTGTTCCCTTAGTTGCGATGAGCAACCCCGTACAGGGTGCGCTTCGCCTGTCTGCGCCTTGCCTCGGTTGGCGGCCCTACGCAACGGCTGGTTATCCGACCTCTCTAAATTCATGCGACCGATCACTAAACACACGCACGAACGCACCGACATACAAAACCCTACACTTACGCTCTCACACAAAACCACACACCCATAGAGAGACGCAAGCTGCCAGCAGCAACCAACACACAAgtgccgcttctcaaagagaacgacttcaagaaaTGCTGATTCGGCTTCAATTAGAATGTTTGGTTTGTTGTGAAAAACTCAGACATACTGATTCTGTATGGTCTTGTAAGCAATGTTATAATATTCTACATCTCAGTTGCGTGAAAAAATGGGCGAATACTTCTAAAATGGAAAGCGGTTGGAGATGTCCGGCTTGCCAAAATATTTATCCAAGTGTTCCAAAAGAATGCAATTGTTACTGTGATAAAGTGATTAATCCCAAATACGAGCCAGGAATATTGCCTCACAGTTGTGGTGAAATATGTGGTCGTAAGGGTAGAACATGTGATCATATGTGTCTTCTTTTATGTCATCCGGGTCCTTGTCCTGATTGCACCGTGCCTACCACAAAAGCATGTGGATGCGGTCTTACTAAGGCTACTGTGATCTGCTGTGCTGATGTTCCTGTCACTTGTCAAAATATTTGCGGTAAATCATTAAATTGCAACATTCACACATGTTCTTCAACGTGTCATCCTGGCGAATGTCGTAAATGTGAAGCGTTTATTAAACAAGAATGTTATTGTGGCAAACTAGGACGCAAAGTTCTTTGTACTGCAGAAGTACAAGCAAGTGCATACTTTGAATGCGATAACGAATGCGGTAAACTGCTTGATTGTGGCAACCACACATGTCAAATGATTTGCCATTCCGGGTCATGTCCACCATGTTCAACATCTCCCCAGGCCATTACCACATGTCCATGTGGACAGACTAAGCTTACCATTGAAAGAAAATCATGTCTCGATCCTATACCTTGCTGTGATAAGGTAAGCGACAACGAGAGTACAAAATTATTTTTTTGTTCTATGGTACTATGA
- Protein Sequence
- MNFGQTIALSDPSLARLSYLARLPLTAHTRSTSTKSVPLVAMSNPVQGALRLSAPCLGWRPYATAGYPTSLNSCDRSLNTRTNAPTYKTLHLRSHTKPHTHRETQAASSNQHTSAASQRERLQEMLIRLQLECLVCCEKLRHTDSVWSCKQCYNILHLSCVKKWANTSKMESGWRCPACQNIYPSVPKECNCYCDKVINPKYEPGILPHSCGEICGRKGRTCDHMCLLLCHPGPCPDCTVPTTKACGCGLTKATVICCADVPVTCQNICGKSLNCNIHTCSSTCHPGECRKCEAFIKQECYCGKLGRKVLCTAEVQASAYFECDNECGKLLDCGNHTCQMICHSGSCPPCSTSPQAITTCPCGQTKLTIERKSCLDPIPCCDKVSDNESTKLFFCSMVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -